RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
CLDN18-203ENST00000479660 CTTNBP2Q8WZ74 1663 aa22.41■■□□□ 1.18
CLDN18-203ENST00000479660 APLP2Q06481 763 aa22.4■■□□□ 1.18
CLDN18-203ENST00000479660 TTBK1Q5TCY1 1321 aaPredicted RBP22.37■■□□□ 1.17
CLDN18-203ENST00000479660 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
CLDN18-203ENST00000479660 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
CLDN18-203ENST00000479660 MAGI1Q96QZ7 1491 aaPredicted RBP22.3■■□□□ 1.16
CLDN18-203ENST00000479660 EFCAB5A4FU69 1503 aa22.3■■□□□ 1.16
CLDN18-203ENST00000479660 CHMP7Q8WUX9 453 aaPredicted RBP22.25■■□□□ 1.15
CLDN18-203ENST00000479660 FHOD3Q2V2M9 1422 aa22.25■■□□□ 1.15
CLDN18-203ENST00000479660 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
CLDN18-203ENST00000479660 SYNJ2O15056 1496 aa22.23■■□□□ 1.15
CLDN18-203ENST00000479660 FBLN2P98095 1184 aa22.21■■□□□ 1.15
CLDN18-203ENST00000479660 IQGAP2Q13576 1575 aa22.2■■□□□ 1.14
CLDN18-203ENST00000479660 SAMD9Q5K651 1589 aa22.19■■□□□ 1.14
CLDN18-203ENST00000479660 KIAA0586Q9BVV6 1533 aa22.16■■□□□ 1.14
CLDN18-203ENST00000479660 KANK4Q5T7N3 995 aaPredicted RBP22.15■■□□□ 1.14
CLDN18-203ENST00000479660 FMN1Q68DA7 1419 aa22.15■■□□□ 1.14
CLDN18-203ENST00000479660 ATP1B4Q9UN42 357 aaPredicted RBP22.12■■□□□ 1.13
CLDN18-203ENST00000479660 PCF11O94913 1555 aaKnown RBP22.11■■□□□ 1.13
CLDN18-203ENST00000479660 CASKIN1Q8WXD9 1431 aa22.09■■□□□ 1.13
CLDN18-203ENST00000479660 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
CLDN18-203ENST00000479660 UGGT2Q9NYU1 1516 aa22.09■■□□□ 1.13
CLDN18-203ENST00000479660 CEP170Q5SW79 1584 aa22.09■■□□□ 1.13
CLDN18-203ENST00000479660 FYCO1Q9BQS8 1478 aa22.08■■□□□ 1.13
CLDN18-203ENST00000479660 NUP160Q12769 1436 aa22.07■■□□□ 1.12
CLDN18-203ENST00000479660 TIAM1Q13009 1591 aa22.06■■□□□ 1.12
CLDN18-203ENST00000479660 HRCP23327 699 aa22.02■■□□□ 1.12
CLDN18-203ENST00000479660 DISP1Q96F81 1524 aa21.99■■□□□ 1.11
CLDN18-203ENST00000479660 LRRC9Q6ZRR7 1453 aa21.99■■□□□ 1.11
CLDN18-203ENST00000479660 JPH4Q96JJ6 628 aa21.98■■□□□ 1.11
CLDN18-203ENST00000479660 CFAP43Q8NDM7 1665 aa21.97■■□□□ 1.11
CLDN18-203ENST00000479660 KIAA0556O60303 1618 aa21.97■■□□□ 1.11
CLDN18-203ENST00000479660 CHD1O14646 1710 aa21.93■■□□□ 1.1
CLDN18-203ENST00000479660 CARMIL2Q6F5E8 1435 aa21.9■■□□□ 1.1
CLDN18-203ENST00000479660 RRBP1Q9P2E9 1410 aaKnown RBP21.88■■□□□ 1.09
CLDN18-203ENST00000479660 HNRNPUL2Q1KMD3 747 aaKnown RBP21.87■■□□□ 1.09
CLDN18-203ENST00000479660 LRRIQ1Q96JM4 1722 aa21.87■■□□□ 1.09
CLDN18-203ENST00000479660 HECW1Q76N89 1606 aa21.87■■□□□ 1.09
CLDN18-203ENST00000479660 MTUS2Q5JR59 1369 aa21.85■■□□□ 1.09
CLDN18-203ENST00000479660 CCDC18Q5T9S5 1454 aa21.85■■□□□ 1.09
CLDN18-203ENST00000479660 CCNB3Q8WWL7 1395 aa21.82■■□□□ 1.08
CLDN18-203ENST00000479660 PHLDB1Q86UU1 1377 aa21.82■■□□□ 1.08
CLDN18-203ENST00000479660 EPRSP07814 1512 aaKnown RBP21.81■■□□□ 1.08
CLDN18-203ENST00000479660 PRG4Q92954 1404 aaPredicted RBP21.79■■□□□ 1.08
CLDN18-203ENST00000479660 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.79■■□□□ 1.08
CLDN18-203ENST00000479660 ARID3CA6NKF2 412 aa21.78■■□□□ 1.08
CLDN18-203ENST00000479660 RAPGEF6Q8TEU7 1601 aa21.78■■□□□ 1.08
CLDN18-203ENST00000479660 CDK13Q14004 1512 aaKnown RBP21.75■■□□□ 1.07
CLDN18-203ENST00000479660 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
CLDN18-203ENST00000479660 NUP153P49790 1475 aaKnown RBP21.74■■□□□ 1.07
CLDN18-203ENST00000479660 PLB1Q6P1J6 1458 aa21.74■■□□□ 1.07
CLDN18-203ENST00000479660 ZEB1P37275 1124 aaPredicted RBP21.73■■□□□ 1.07
CLDN18-203ENST00000479660 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
CLDN18-203ENST00000479660 MAGI3Q5TCQ9 1506 aa21.72■■□□□ 1.07
CLDN18-203ENST00000479660 SHROOM2Q13796 1616 aa21.71■■□□□ 1.07
CLDN18-203ENST00000479660 NCOA2Q15596 1464 aa21.7■■□□□ 1.06
CLDN18-203ENST00000479660 SUPT6HQ7KZ85 1726 aaKnown RBP21.7■■□□□ 1.06
CLDN18-203ENST00000479660 PTPRGP23470 1445 aa21.68■■□□□ 1.06
CLDN18-203ENST00000479660 FAM50AQ14320 339 aaKnown RBP21.68■■□□□ 1.06
CLDN18-203ENST00000479660 CLASP1Q7Z460 1538 aa21.67■■□□□ 1.06
CLDN18-203ENST00000479660 ITGAEP38570 1179 aa21.67■■□□□ 1.06
CLDN18-203ENST00000479660 CDK11AQ9UQ88 783 aaPredicted RBP21.67■■□□□ 1.06
CLDN18-203ENST00000479660 ABCA8O94911 1581 aa21.65■■□□□ 1.06
CLDN18-203ENST00000479660 FGD6Q6ZV73 1430 aa21.64■■□□□ 1.05
CLDN18-203ENST00000479660 ARHGEF11O15085 1522 aa21.63■■□□□ 1.05
CLDN18-203ENST00000479660 MYOM3Q5VTT5 1437 aa21.62■■□□□ 1.05
CLDN18-203ENST00000479660 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.61■■□□□ 1.05
CLDN18-203ENST00000479660 ERCC6L2Q5T890 1561 aa21.6■■□□□ 1.05
CLDN18-203ENST00000479660 ATP10BO94823 1461 aa21.55■■□□□ 1.04
CLDN18-203ENST00000479660 TROQ12816 1431 aaPredicted RBP21.55■■□□□ 1.04
CLDN18-203ENST00000479660 UACAQ9BZF9 1416 aa21.55■■□□□ 1.04
CLDN18-203ENST00000479660 PLEKHD1A6NEE1 506 aa21.52■■□□□ 1.04
CLDN18-203ENST00000479660 OSCARQ8IYS5 282 aa21.52■■□□□ 1.04
CLDN18-203ENST00000479660 PTPN23Q9H3S7 1636 aa21.49■■□□□ 1.03
CLDN18-203ENST00000479660 MIA2Q96PC5 1412 aa21.49■■□□□ 1.03
CLDN18-203ENST00000479660 TCOF1Q13428 1488 aaKnown RBP21.45■■□□□ 1.03
CLDN18-203ENST00000479660 ABCC2Q92887 1545 aa21.45■■□□□ 1.02
CLDN18-203ENST00000479660 SETD5Q9C0A6 1442 aa21.44■■□□□ 1.02
CLDN18-203ENST00000479660 ADCY10Q96PN6 1610 aa21.43■■□□□ 1.02
CLDN18-203ENST00000479660 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
CLDN18-203ENST00000479660 KIF14Q15058 1648 aa21.42■■□□□ 1.02
CLDN18-203ENST00000479660 PTPRKQ15262 1439 aa21.41■■□□□ 1.02
CLDN18-203ENST00000479660 DHX57Q6P158 1386 aaKnown RBP21.39■■□□□ 1.02
CLDN18-203ENST00000479660 GPATCH8Q9UKJ3 1502 aaKnown RBP21.38■■□□□ 1.01
CLDN18-203ENST00000479660 CFDP1Q9UEE9 299 aaPredicted RBP21.38■■□□□ 1.01
CLDN18-203ENST00000479660 UHRF1BP1LA0JNW5 1464 aa21.37■■□□□ 1.01
CLDN18-203ENST00000479660 ITSN2Q9NZM3 1697 aa21.35■■□□□ 1.01
CLDN18-203ENST00000479660 ZNF644Q9H582 1327 aaPredicted RBP21.34■■□□□ 1.01
CLDN18-203ENST00000479660 ABCC10Q5T3U5 1492 aa21.34■■□□□ 1.01
CLDN18-203ENST00000479660 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1
CLDN18-203ENST00000479660 HFM1A2PYH4 1435 aa21.32■■□□□ 1
CLDN18-203ENST00000479660 CHIC2Q9UKJ5 165 aa21.31■■□□□ 1
CLDN18-203ENST00000479660 KDM5BQ9UGL1 1544 aa21.31■■□□□ 1
CLDN18-203ENST00000479660 ZNF777Q9ULD5 760 aaPredicted RBP21.3■■□□□ 1
CLDN18-203ENST00000479660 ZCCHC11Q5TAX3 1644 aaKnown RBP21.29■■□□□ 1
CLDN18-203ENST00000479660 CDC42BPAQ5VT25 1732 aa21.28■■□□□ 1
CLDN18-203ENST00000479660 CAMSAP2Q08AD1 1489 aa21.28■■□□□ 1
CLDN18-203ENST00000479660 DAPK1P53355 1430 aa21.27■■□□□ 1
CLDN18-203ENST00000479660 NAIPQ13075 1403 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms