RNA–Protein interactions for RNA: ENST00000479210.1

GLI3-206, Transcript of GLI family zinc finger 3, humanhuman

TSL 2

Gene GLI3, Length 4,968 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-206ENST00000479210 EEA1Q15075 1411 aa19.2■□□□□ 0.66
GLI3-206ENST00000479210 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
GLI3-206ENST00000479210 ANP32BQ92688 251 aaKnown RBP19.18■□□□□ 0.66
GLI3-206ENST00000479210 WRNQ14191 1432 aaPredicted RBP eCLIP19.13■□□□□ 0.65
GLI3-206ENST00000479210 NBR1Q14596 966 aa19.13■□□□□ 0.65
GLI3-206ENST00000479210 KCNH8Q96L42 1107 aa19.12■□□□□ 0.65
GLI3-206ENST00000479210 PLEKHD1A6NEE1 506 aa19.11■□□□□ 0.65
GLI3-206ENST00000479210 EIF5BO60841 1220 aaKnown RBP19.1■□□□□ 0.65
GLI3-206ENST00000479210 RGL3Q3MIN7 710 aa19.1■□□□□ 0.65
GLI3-206ENST00000479210 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
GLI3-206ENST00000479210 RB1CC1Q8TDY2 1594 aa19.06■□□□□ 0.64
GLI3-206ENST00000479210 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
GLI3-206ENST00000479210 SENP3-EIF4A1A0A087X0R7 540 aa19.03■□□□□ 0.64
GLI3-206ENST00000479210 CFDP1Q9UEE9 299 aaPredicted RBP19.02■□□□□ 0.64
GLI3-206ENST00000479210 KIF27Q86VH2 1401 aa19.02■□□□□ 0.63
GLI3-206ENST00000479210 ARXQ96QS3 562 aa19■□□□□ 0.63
GLI3-206ENST00000479210 BAZ1BQ9UIG0 1483 aaKnown RBP18.98■□□□□ 0.63
GLI3-206ENST00000479210 CEP164Q9UPV0 1460 aa18.98■□□□□ 0.63
GLI3-206ENST00000479210 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
GLI3-206ENST00000479210 MYH16Q9H6N6 1097 aa18.96■□□□□ 0.63
GLI3-206ENST00000479210 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
GLI3-206ENST00000479210 CARD11Q9BXL7 1154 aa18.94■□□□□ 0.62
GLI3-206ENST00000479210 SUPT16HQ9Y5B9 1047 aaKnown RBP18.93■□□□□ 0.62
GLI3-206ENST00000479210 KNSTRNQ9Y448 316 aa18.92■□□□□ 0.62
GLI3-206ENST00000479210 CDCA8Q53HL2 280 aa18.9■□□□□ 0.62
GLI3-206ENST00000479210 PLEKHG5O94827 1062 aa18.89■□□□□ 0.62
GLI3-206ENST00000479210 NACADO15069 1562 aa18.88■□□□□ 0.61
GLI3-206ENST00000479210 CFAP53Q96M91 514 aa18.87■□□□□ 0.61
GLI3-206ENST00000479210 C14orf37Q86TY3 774 aa18.87■□□□□ 0.61
GLI3-206ENST00000479210 ZBTB7CA1YPR0 619 aa18.86■□□□□ 0.61
GLI3-206ENST00000479210 ANP32EQ9BTT0 268 aa18.85■□□□□ 0.61
GLI3-206ENST00000479210 BECN1Q14457 450 aa18.82■□□□□ 0.6
GLI3-206ENST00000479210 PPM1GO15355 546 aaPredicted RBP18.82■□□□□ 0.6
GLI3-206ENST00000479210 NEUROD2Q15784 382 aa18.82■□□□□ 0.6
GLI3-206ENST00000479210 DDRGK1Q96HY6 314 aa18.82■□□□□ 0.6
GLI3-206ENST00000479210 A0A0G2JS52 829 aa18.81■□□□□ 0.6
GLI3-206ENST00000479210 CCNB3Q8WWL7 1395 aa18.8■□□□□ 0.6
GLI3-206ENST00000479210 CECR2Q9BXF3 1484 aa18.8■□□□□ 0.6
GLI3-206ENST00000479210 BAZ1AQ9NRL2 1556 aaPredicted RBP18.77■□□□□ 0.59
GLI3-206ENST00000479210 SOGA1O94964 1423 aa18.77■□□□□ 0.59
GLI3-206ENST00000479210 PPP4R2Q9NY27 417 aa18.74■□□□□ 0.59
GLI3-206ENST00000479210 FTSJ3Q8IY81 847 aaKnown RBP18.74■□□□□ 0.59
GLI3-206ENST00000479210 FHAD1B1AJZ9 1412 aa18.74■□□□□ 0.59
GLI3-206ENST00000479210 CARMIL1Q5VZK9 1371 aa18.74■□□□□ 0.59
GLI3-206ENST00000479210 ARID4BQ4LE39 1312 aaPredicted RBP18.73■□□□□ 0.59
GLI3-206ENST00000479210 CC2D1BQ5T0F9 858 aaKnown RBP18.72■□□□□ 0.59
GLI3-206ENST00000479210 TNNT2P45379 298 aaPredicted RBP18.71■□□□□ 0.59
GLI3-206ENST00000479210 MAPK8IP3Q9UPT6 1336 aa18.71■□□□□ 0.58
GLI3-206ENST00000479210 DCAF11Q8TEB1 546 aa18.7■□□□□ 0.58
GLI3-206ENST00000479210 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
GLI3-206ENST00000479210 POGKQ9P215 609 aa18.7■□□□□ 0.58
GLI3-206ENST00000479210 LAS1LQ9Y4W2 734 aaKnown RBP18.7■□□□□ 0.58
GLI3-206ENST00000479210 RGS3P49796 1198 aa18.69■□□□□ 0.58
GLI3-206ENST00000479210 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
GLI3-206ENST00000479210 TIMELESSQ9UNS1 1208 aa18.68■□□□□ 0.58
GLI3-206ENST00000479210 CUX2O14529 1486 aa18.68■□□□□ 0.58
GLI3-206ENST00000479210 GOLGA6L22H0YM25 854 aa18.68■□□□□ 0.58
GLI3-206ENST00000479210 GLIPR1L2Q4G1C9 344 aa18.67■□□□□ 0.58
GLI3-206ENST00000479210 NCLP19338 710 aaKnown RBP18.67■□□□□ 0.58
GLI3-206ENST00000479210 B4GALNT3Q6L9W6 998 aa18.65■□□□□ 0.58
GLI3-206ENST00000479210 TMF1P82094 1093 aa18.63■□□□□ 0.57
GLI3-206ENST00000479210 TRIM44Q96DX7 344 aaPredicted RBP18.63■□□□□ 0.57
GLI3-206ENST00000479210 KANK4Q5T7N3 995 aaPredicted RBP18.62■□□□□ 0.57
GLI3-206ENST00000479210 U2SURPO15042 1029 aaKnown RBP18.62■□□□□ 0.57
GLI3-206ENST00000479210 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
GLI3-206ENST00000479210 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
GLI3-206ENST00000479210 SETD5Q9C0A6 1442 aa18.6■□□□□ 0.57
GLI3-206ENST00000479210 HAP1P54257 671 aaPredicted RBP18.6■□□□□ 0.57
GLI3-206ENST00000479210 CASC1Q6TDU7 716 aa18.59■□□□□ 0.57
GLI3-206ENST00000479210 EIF4G1Q04637 1599 aaKnown RBP18.58■□□□□ 0.57
GLI3-206ENST00000479210 HSPA5P11021 654 aaKnown RBP18.58■□□□□ 0.56
GLI3-206ENST00000479210 CCER2I3L3R5 266 aa18.57■□□□□ 0.56
GLI3-206ENST00000479210 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
GLI3-206ENST00000479210 FOXD1Q16676 465 aa18.55■□□□□ 0.56
GLI3-206ENST00000479210 PKD2Q13563 968 aa18.54■□□□□ 0.56
GLI3-206ENST00000479210 MS4A1P11836 297 aa18.53■□□□□ 0.56
GLI3-206ENST00000479210 NOP58Q9Y2X3 529 aaKnown RBP18.52■□□□□ 0.56
GLI3-206ENST00000479210 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.56
GLI3-206ENST00000479210 TPRNQ4KMQ1 711 aa18.52■□□□□ 0.56
GLI3-206ENST00000479210 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.55
GLI3-206ENST00000479210 CHMP4BQ9H444 224 aaKnown RBP18.51■□□□□ 0.55
GLI3-206ENST00000479210 MROH2BQ7Z745 1585 aa18.51■□□□□ 0.55
GLI3-206ENST00000479210 ABCC8Q09428 1581 aa18.51■□□□□ 0.55
GLI3-206ENST00000479210 KANK1Q14678 1352 aa18.51■□□□□ 0.55
GLI3-206ENST00000479210 SRPK2P78362 688 aaKnown RBP18.49■□□□□ 0.55
GLI3-206ENST00000479210 PTMAP06454 111 aaKnown RBP18.49■□□□□ 0.55
GLI3-206ENST00000479210 SAFB2Q14151 953 aaKnown RBP eCLIP18.49■□□□□ 0.55
GLI3-206ENST00000479210 MORC1Q86VD1 984 aa18.49■□□□□ 0.55
GLI3-206ENST00000479210 PNNQ9H307 717 aaKnown RBP18.48■□□□□ 0.55
GLI3-206ENST00000479210 RAB3GAP2Q9H2M9 1393 aa18.47■□□□□ 0.55
GLI3-206ENST00000479210 CDK11BP21127 795 aaKnown RBP18.47■□□□□ 0.55
GLI3-206ENST00000479210 ZRSR1Q15695 479 aaKnown RBP18.47■□□□□ 0.55
GLI3-206ENST00000479210 MLECQ14165 292 aa18.45■□□□□ 0.54
GLI3-206ENST00000479210 GGT6Q6P531 493 aa18.45■□□□□ 0.54
GLI3-206ENST00000479210 MPHOSPH9Q99550 1183 aa18.45■□□□□ 0.54
GLI3-206ENST00000479210 SOX12O15370 315 aa18.44■□□□□ 0.54
GLI3-206ENST00000479210 OS9Q13438 667 aaPredicted RBP18.43■□□□□ 0.54
GLI3-206ENST00000479210 HSP90AB1P08238 724 aaKnown RBP18.42■□□□□ 0.54
GLI3-206ENST00000479210 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
GLI3-206ENST00000479210 ERICH6BQ5W0A0 696 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms