RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 HECW2Q9P2P5 1572 aa23.31■■□□□ 1.32
HDAC8-217ENST00000478743 ADCY10Q96PN6 1610 aa23.27■■□□□ 1.32
HDAC8-217ENST00000478743 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
HDAC8-217ENST00000478743 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
HDAC8-217ENST00000478743 FHAD1B1AJZ9 1412 aa23.16■■□□□ 1.3
HDAC8-217ENST00000478743 RUSC2Q8N2Y8 1516 aa23.13■■□□□ 1.29
HDAC8-217ENST00000478743 PPRC1Q5VV67 1664 aaKnown RBP23.13■■□□□ 1.29
HDAC8-217ENST00000478743 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
HDAC8-217ENST00000478743 NPM1P06748 294 aaKnown RBP eCLIP23.04■■□□□ 1.28
HDAC8-217ENST00000478743 ERICH3Q5RHP9 1530 aa23.03■■□□□ 1.28
HDAC8-217ENST00000478743 WRNQ14191 1432 aaPredicted RBP eCLIP22.98■■□□□ 1.27
HDAC8-217ENST00000478743 COL17A1Q9UMD9 1497 aaPredicted RBP22.98■■□□□ 1.27
HDAC8-217ENST00000478743 BIVM-ERCC5R4GMW8 1640 aa22.96■■□□□ 1.27
HDAC8-217ENST00000478743 FBXO41Q8TF61 875 aa22.94■■□□□ 1.26
HDAC8-217ENST00000478743 TOP2BQ02880 1626 aa22.9■■□□□ 1.26
HDAC8-217ENST00000478743 GLI2P10070 1586 aa22.87■■□□□ 1.25
HDAC8-217ENST00000478743 CUL7Q14999 1698 aa22.82■■□□□ 1.24
HDAC8-217ENST00000478743 ASXL2Q76L83 1435 aa22.82■■□□□ 1.24
HDAC8-217ENST00000478743 MAP3K4Q9Y6R4 1608 aa22.79■■□□□ 1.24
HDAC8-217ENST00000478743 ABCC2Q92887 1545 aa22.77■■□□□ 1.24
HDAC8-217ENST00000478743 KIAA0586Q9BVV6 1533 aa22.73■■□□□ 1.23
HDAC8-217ENST00000478743 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
HDAC8-217ENST00000478743 TTBK1Q5TCY1 1321 aaPredicted RBP22.72■■□□□ 1.23
HDAC8-217ENST00000478743 PLB1Q6P1J6 1458 aa22.72■■□□□ 1.23
HDAC8-217ENST00000478743 EPRSP07814 1512 aaKnown RBP22.69■■□□□ 1.22
HDAC8-217ENST00000478743 PTPRGP23470 1445 aa22.68■■□□□ 1.22
HDAC8-217ENST00000478743 KIF21BO75037 1637 aa22.68■■□□□ 1.22
HDAC8-217ENST00000478743 TEX14Q8IWB6 1497 aa22.62■■□□□ 1.21
HDAC8-217ENST00000478743 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
HDAC8-217ENST00000478743 UHRF1BP1LA0JNW5 1464 aa22.59■■□□□ 1.21
HDAC8-217ENST00000478743 ILDR2Q71H61 639 aa22.58■■□□□ 1.21
HDAC8-217ENST00000478743 TNIKQ9UKE5 1360 aa22.57■■□□□ 1.2
HDAC8-217ENST00000478743 KDM5BQ9UGL1 1544 aa22.53■■□□□ 1.2
HDAC8-217ENST00000478743 UACAQ9BZF9 1416 aa22.52■■□□□ 1.2
HDAC8-217ENST00000478743 ADAMTSL3P82987 1691 aa22.48■■□□□ 1.19
HDAC8-217ENST00000478743 PTPRMP28827 1452 aa22.47■■□□□ 1.19
HDAC8-217ENST00000478743 IGF1RP08069 1367 aa22.47■■□□□ 1.19
HDAC8-217ENST00000478743 DISP1Q96F81 1524 aa22.46■■□□□ 1.19
HDAC8-217ENST00000478743 SOCS7O14512 581 aa22.45■■□□□ 1.18
HDAC8-217ENST00000478743 CARMIL2Q6F5E8 1435 aa22.45■■□□□ 1.18
HDAC8-217ENST00000478743 PCF11O94913 1555 aaKnown RBP22.45■■□□□ 1.18
HDAC8-217ENST00000478743 IQGAP2Q13576 1575 aa22.45■■□□□ 1.18
HDAC8-217ENST00000478743 WDR7Q9Y4E6 1490 aa22.41■■□□□ 1.18
HDAC8-217ENST00000478743 CFAP43Q8NDM7 1665 aa22.41■■□□□ 1.18
HDAC8-217ENST00000478743 MAGI3Q5TCQ9 1506 aa22.39■■□□□ 1.17
HDAC8-217ENST00000478743 DISP3Q9P2K9 1392 aa22.38■■□□□ 1.17
HDAC8-217ENST00000478743 MADDQ8WXG6 1647 aa22.37■■□□□ 1.17
HDAC8-217ENST00000478743 CD109Q6YHK3 1445 aa22.34■■□□□ 1.17
HDAC8-217ENST00000478743 BCORL1Q5H9F3 1711 aa22.33■■□□□ 1.17
HDAC8-217ENST00000478743 KIAA0556O60303 1618 aa22.31■■□□□ 1.16
HDAC8-217ENST00000478743 KIF27Q86VH2 1401 aa22.29■■□□□ 1.16
HDAC8-217ENST00000478743 RIMS1Q86UR5 1692 aaKnown RBP22.26■■□□□ 1.15
HDAC8-217ENST00000478743 CARMIL1Q5VZK9 1371 aa22.26■■□□□ 1.15
HDAC8-217ENST00000478743 SPATA31D1Q6ZQQ2 1576 aa22.26■■□□□ 1.15
HDAC8-217ENST00000478743 HSPA2P54652 639 aa22.25■■□□□ 1.15
HDAC8-217ENST00000478743 CERKQ8TCT0 537 aa22.25■■□□□ 1.15
HDAC8-217ENST00000478743 UGGT2Q9NYU1 1516 aa22.25■■□□□ 1.15
HDAC8-217ENST00000478743 ARAP3Q8WWN8 1544 aa22.24■■□□□ 1.15
HDAC8-217ENST00000478743 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
HDAC8-217ENST00000478743 KCNH8Q96L42 1107 aa22.21■■□□□ 1.15
HDAC8-217ENST00000478743 FRMPD1Q5SYB0 1578 aa22.21■■□□□ 1.15
HDAC8-217ENST00000478743 ABCA8O94911 1581 aa22.16■■□□□ 1.14
HDAC8-217ENST00000478743 SIGLEC1Q9BZZ2 1709 aa22.11■■□□□ 1.13
HDAC8-217ENST00000478743 RAPGEF3O95398 923 aa22.1■■□□□ 1.13
HDAC8-217ENST00000478743 ARHGEF40Q8TER5 1519 aa22.06■■□□□ 1.12
HDAC8-217ENST00000478743 PLPPR3Q6T4P5 718 aa22.06■■□□□ 1.12
HDAC8-217ENST00000478743 ABCA9Q8IUA7 1624 aa22.05■■□□□ 1.12
HDAC8-217ENST00000478743 ARID4BQ4LE39 1312 aaPredicted RBP22.05■■□□□ 1.12
HDAC8-217ENST00000478743 CTTNBP2Q8WZ74 1663 aa22■■□□□ 1.11
HDAC8-217ENST00000478743 STRCQ7RTU9 1775 aa21.98■■□□□ 1.11
HDAC8-217ENST00000478743 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
HDAC8-217ENST00000478743 RICTORQ6R327 1708 aa21.97■■□□□ 1.11
HDAC8-217ENST00000478743 RAPGEF2Q9Y4G8 1499 aa21.96■■□□□ 1.11
HDAC8-217ENST00000478743 FER1L4A9Z1Z3 1794 aa21.95■■□□□ 1.1
HDAC8-217ENST00000478743 NEO1Q92859 1461 aa21.94■■□□□ 1.1
HDAC8-217ENST00000478743 TTC37Q6PGP7 1564 aa21.91■■□□□ 1.1
HDAC8-217ENST00000478743 ATP10BO94823 1461 aa21.91■■□□□ 1.1
HDAC8-217ENST00000478743 PREX1Q8TCU6 1659 aa21.91■■□□□ 1.1
HDAC8-217ENST00000478743 PHLDB1Q86UU1 1377 aa21.9■■□□□ 1.1
HDAC8-217ENST00000478743 GOLGA3Q08378 1498 aa21.85■■□□□ 1.09
HDAC8-217ENST00000478743 YEATS2Q9ULM3 1422 aa21.84■■□□□ 1.09
HDAC8-217ENST00000478743 FANCAO15360 1455 aa21.83■■□□□ 1.09
HDAC8-217ENST00000478743 ZMYM4Q5VZL5 1548 aa21.8■■□□□ 1.08
HDAC8-217ENST00000478743 LTBP4Q8N2S1 1624 aa21.8■■□□□ 1.08
HDAC8-217ENST00000478743 ZFYVE16Q7Z3T8 1539 aa21.8■■□□□ 1.08
HDAC8-217ENST00000478743 DENND4BO75064 1496 aaPredicted RBP21.79■■□□□ 1.08
HDAC8-217ENST00000478743 MLECQ14165 292 aa21.79■■□□□ 1.08
HDAC8-217ENST00000478743 FHOD3Q2V2M9 1422 aa21.77■■□□□ 1.08
HDAC8-217ENST00000478743 POGZQ7Z3K3 1410 aa21.77■■□□□ 1.08
HDAC8-217ENST00000478743 AKNAQ7Z591 1439 aa21.77■■□□□ 1.08
HDAC8-217ENST00000478743 ARHGEF12Q9NZN5 1544 aa21.75■■□□□ 1.07
HDAC8-217ENST00000478743 EFCAB5A4FU69 1503 aa21.74■■□□□ 1.07
HDAC8-217ENST00000478743 HECW1Q76N89 1606 aa21.73■■□□□ 1.07
HDAC8-217ENST00000478743 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
HDAC8-217ENST00000478743 RAPGEF6Q8TEU7 1601 aa21.7■■□□□ 1.06
HDAC8-217ENST00000478743 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
HDAC8-217ENST00000478743 CFAP74Q9C0B2 1584 aa21.68■■□□□ 1.06
HDAC8-217ENST00000478743 PTPRTO14522 1441 aa21.66■■□□□ 1.06
HDAC8-217ENST00000478743 IQSEC2Q5JU85 1478 aa21.64■■□□□ 1.06
HDAC8-217ENST00000478743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms