RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 DIP2BQ9P265 1576 aa26.39■■□□□ 1.82
USP11-207ENST00000478596 NPM1P06748 294 aaKnown RBP eCLIP26.37■■□□□ 1.81
USP11-207ENST00000478596 JPH4Q96JJ6 628 aa26.32■■□□□ 1.8
USP11-207ENST00000478596 WRNQ14191 1432 aaPredicted RBP eCLIP26.3■■□□□ 1.8
USP11-207ENST00000478596 ERICH3Q5RHP9 1530 aa26.24■■□□□ 1.79
USP11-207ENST00000478596 ADCY10Q96PN6 1610 aa26.21■■□□□ 1.79
USP11-207ENST00000478596 ADGRL1O94910 1474 aa26.17■■□□□ 1.78
USP11-207ENST00000478596 RUSC2Q8N2Y8 1516 aa26.12■■□□□ 1.77
USP11-207ENST00000478596 TSPOAP1O95153 1857 aa26.11■■□□□ 1.77
USP11-207ENST00000478596 HECW2Q9P2P5 1572 aa26.11■■□□□ 1.77
USP11-207ENST00000478596 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
USP11-207ENST00000478596 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
USP11-207ENST00000478596 FBXO41Q8TF61 875 aa25.95■■□□□ 1.74
USP11-207ENST00000478596 GLI2P10070 1586 aa25.94■■□□□ 1.74
USP11-207ENST00000478596 KIAA0586Q9BVV6 1533 aa25.93■■□□□ 1.74
USP11-207ENST00000478596 PPRC1Q5VV67 1664 aaKnown RBP25.93■■□□□ 1.74
USP11-207ENST00000478596 COL17A1Q9UMD9 1497 aaPredicted RBP25.91■■□□□ 1.74
USP11-207ENST00000478596 PLB1Q6P1J6 1458 aa25.89■■□□□ 1.73
USP11-207ENST00000478596 ABCC2Q92887 1545 aa25.88■■□□□ 1.73
USP11-207ENST00000478596 PTPRGP23470 1445 aa25.88■■□□□ 1.73
USP11-207ENST00000478596 ASXL2Q76L83 1435 aa25.88■■□□□ 1.73
USP11-207ENST00000478596 TEX14Q8IWB6 1497 aa25.76■■□□□ 1.71
USP11-207ENST00000478596 TNIKQ9UKE5 1360 aa25.74■■□□□ 1.71
USP11-207ENST00000478596 UHRF1BP1LA0JNW5 1464 aa25.73■■□□□ 1.71
USP11-207ENST00000478596 MAP3K4Q9Y6R4 1608 aa25.72■■□□□ 1.71
USP11-207ENST00000478596 EPRSP07814 1512 aaKnown RBP25.72■■□□□ 1.71
USP11-207ENST00000478596 CARMIL2Q6F5E8 1435 aa25.69■■□□□ 1.7
USP11-207ENST00000478596 IGF1RP08069 1367 aa25.68■■□□□ 1.7
USP11-207ENST00000478596 TTBK1Q5TCY1 1321 aaPredicted RBP25.67■■□□□ 1.7
USP11-207ENST00000478596 CUL7Q14999 1698 aa25.64■■□□□ 1.7
USP11-207ENST00000478596 UACAQ9BZF9 1416 aa25.64■■□□□ 1.7
USP11-207ENST00000478596 KDM5BQ9UGL1 1544 aa25.63■■□□□ 1.69
USP11-207ENST00000478596 KIF27Q86VH2 1401 aa25.54■■□□□ 1.68
USP11-207ENST00000478596 LMTK3Q96Q04 1460 aa25.53■■□□□ 1.68
USP11-207ENST00000478596 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
USP11-207ENST00000478596 IQGAP2Q13576 1575 aa25.48■■□□□ 1.67
USP11-207ENST00000478596 DISP1Q96F81 1524 aa25.48■■□□□ 1.67
USP11-207ENST00000478596 ZCCHC11Q5TAX3 1644 aaKnown RBP25.48■■□□□ 1.67
USP11-207ENST00000478596 MAGI3Q5TCQ9 1506 aa25.47■■□□□ 1.67
USP11-207ENST00000478596 WDR7Q9Y4E6 1490 aa25.47■■□□□ 1.67
USP11-207ENST00000478596 CARMIL1Q5VZK9 1371 aa25.46■■□□□ 1.67
USP11-207ENST00000478596 CD109Q6YHK3 1445 aa25.42■■□□□ 1.66
USP11-207ENST00000478596 KIF21BO75037 1637 aa25.41■■□□□ 1.66
USP11-207ENST00000478596 PTPRMP28827 1452 aa25.4■■□□□ 1.66
USP11-207ENST00000478596 CFAP43Q8NDM7 1665 aa25.34■■□□□ 1.65
USP11-207ENST00000478596 UGGT2Q9NYU1 1516 aa25.33■■□□□ 1.65
USP11-207ENST00000478596 PCF11O94913 1555 aaKnown RBP25.32■■□□□ 1.64
USP11-207ENST00000478596 ADAMTSL3P82987 1691 aa25.32■■□□□ 1.64
USP11-207ENST00000478596 SOCS7O14512 581 aa25.31■■□□□ 1.64
USP11-207ENST00000478596 ARAP3Q8WWN8 1544 aa25.31■■□□□ 1.64
USP11-207ENST00000478596 KIAA0556O60303 1618 aa25.26■■□□□ 1.63
USP11-207ENST00000478596 KCNH8Q96L42 1107 aa25.25■■□□□ 1.63
USP11-207ENST00000478596 ILDR2Q71H61 639 aa25.24■■□□□ 1.63
USP11-207ENST00000478596 CERKQ8TCT0 537 aa25.18■■□□□ 1.62
USP11-207ENST00000478596 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
USP11-207ENST00000478596 DISP3Q9P2K9 1392 aa25.18■■□□□ 1.62
USP11-207ENST00000478596 BCORL1Q5H9F3 1711 aa25.14■■□□□ 1.61
USP11-207ENST00000478596 ABCA8O94911 1581 aa25.13■■□□□ 1.61
USP11-207ENST00000478596 MADDQ8WXG6 1647 aa25.12■■□□□ 1.61
USP11-207ENST00000478596 RAPGEF2Q9Y4G8 1499 aa25.1■■□□□ 1.61
USP11-207ENST00000478596 HSPA2P54652 639 aa25.08■■□□□ 1.61
USP11-207ENST00000478596 RAPGEF3O95398 923 aa25.07■■□□□ 1.6
USP11-207ENST00000478596 ARID4BQ4LE39 1312 aaPredicted RBP25.06■■□□□ 1.6
USP11-207ENST00000478596 GOLGA3Q08378 1498 aa25.02■■□□□ 1.6
USP11-207ENST00000478596 NEO1Q92859 1461 aa25.02■■□□□ 1.6
USP11-207ENST00000478596 ABCA9Q8IUA7 1624 aa24.99■■□□□ 1.59
USP11-207ENST00000478596 FRMPD1Q5SYB0 1578 aa24.97■■□□□ 1.59
USP11-207ENST00000478596 RIMS1Q86UR5 1692 aaKnown RBP24.97■■□□□ 1.59
USP11-207ENST00000478596 ATP10BO94823 1461 aa24.92■■□□□ 1.58
USP11-207ENST00000478596 ARHGEF40Q8TER5 1519 aa24.91■■□□□ 1.58
USP11-207ENST00000478596 SPATA31D1Q6ZQQ2 1576 aa24.9■■□□□ 1.58
USP11-207ENST00000478596 POGZQ7Z3K3 1410 aa24.87■■□□□ 1.57
USP11-207ENST00000478596 CTTNBP2Q8WZ74 1663 aa24.85■■□□□ 1.57
USP11-207ENST00000478596 ARID3CA6NKF2 412 aa24.84■■□□□ 1.57
USP11-207ENST00000478596 FANCAO15360 1455 aa24.83■■□□□ 1.56
USP11-207ENST00000478596 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
USP11-207ENST00000478596 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
USP11-207ENST00000478596 DENND4BO75064 1496 aaPredicted RBP24.81■■□□□ 1.56
USP11-207ENST00000478596 FHOD3Q2V2M9 1422 aa24.8■■□□□ 1.56
USP11-207ENST00000478596 AKNAQ7Z591 1439 aa24.79■■□□□ 1.56
USP11-207ENST00000478596 YEATS2Q9ULM3 1422 aa24.79■■□□□ 1.56
USP11-207ENST00000478596 DMRT2Q9Y5R5 561 aa24.79■■□□□ 1.56
USP11-207ENST00000478596 TTC37Q6PGP7 1564 aa24.76■■□□□ 1.55
USP11-207ENST00000478596 RICTORQ6R327 1708 aa24.75■■□□□ 1.55
USP11-207ENST00000478596 ZMYM4Q5VZL5 1548 aa24.73■■□□□ 1.55
USP11-207ENST00000478596 SIGLEC1Q9BZZ2 1709 aa24.7■■□□□ 1.54
USP11-207ENST00000478596 ZFYVE16Q7Z3T8 1539 aa24.7■■□□□ 1.54
USP11-207ENST00000478596 MAGI2Q86UL8 1455 aa24.7■■□□□ 1.54
USP11-207ENST00000478596 EFCAB5A4FU69 1503 aa24.69■■□□□ 1.54
USP11-207ENST00000478596 PREX1Q8TCU6 1659 aa24.68■■□□□ 1.54
USP11-207ENST00000478596 MLECQ14165 292 aa24.66■■□□□ 1.54
USP11-207ENST00000478596 FER1L4A9Z1Z3 1794 aa24.66■■□□□ 1.54
USP11-207ENST00000478596 STRCQ7RTU9 1775 aa24.65■■□□□ 1.54
USP11-207ENST00000478596 P3H3Q8IVL6 736 aa24.64■■□□□ 1.54
USP11-207ENST00000478596 ARHGEF12Q9NZN5 1544 aa24.64■■□□□ 1.53
USP11-207ENST00000478596 CFAP74Q9C0B2 1584 aa24.63■■□□□ 1.53
USP11-207ENST00000478596 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.63■■□□□ 1.53
USP11-207ENST00000478596 HNRNPUL2Q1KMD3 747 aaKnown RBP24.63■■□□□ 1.53
USP11-207ENST00000478596 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
USP11-207ENST00000478596 PTPRTO14522 1441 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms