RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 PRG4Q92954 1404 aaPredicted RBP19.64■□□□□ 0.73
PDCD11-204ENST00000478543 DIP2BQ9P265 1576 aa19.63■□□□□ 0.73
PDCD11-204ENST00000478543 FHAD1B1AJZ9 1412 aa19.63■□□□□ 0.73
PDCD11-204ENST00000478543 FAM69CQ0P6D2 419 aa19.61■□□□□ 0.73
PDCD11-204ENST00000478543 MAPKBP1O60336 1514 aa19.58■□□□□ 0.73
PDCD11-204ENST00000478543 ADCY10Q96PN6 1610 aa19.57■□□□□ 0.72
PDCD11-204ENST00000478543 KDM6BO15054 1643 aa19.56■□□□□ 0.72
PDCD11-204ENST00000478543 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
PDCD11-204ENST00000478543 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
PDCD11-204ENST00000478543 JPH4Q96JJ6 628 aa19.54■□□□□ 0.72
PDCD11-204ENST00000478543 TSPOAP1O95153 1857 aa19.51■□□□□ 0.71
PDCD11-204ENST00000478543 NPM1P06748 294 aaKnown RBP eCLIP19.4■□□□□ 0.7
PDCD11-204ENST00000478543 FAM9AQ8IZU1 332 aaPredicted RBP19.39■□□□□ 0.69
PDCD11-204ENST00000478543 PPRC1Q5VV67 1664 aaKnown RBP19.39■□□□□ 0.69
PDCD11-204ENST00000478543 ADGRL1O94910 1474 aa19.35■□□□□ 0.69
PDCD11-204ENST00000478543 KIF27Q86VH2 1401 aa19.35■□□□□ 0.69
PDCD11-204ENST00000478543 HECW2Q9P2P5 1572 aa19.31■□□□□ 0.68
PDCD11-204ENST00000478543 COL17A1Q9UMD9 1497 aaPredicted RBP19.3■□□□□ 0.68
PDCD11-204ENST00000478543 EEA1Q15075 1411 aa19.3■□□□□ 0.68
PDCD11-204ENST00000478543 KIAA0586Q9BVV6 1533 aa19.3■□□□□ 0.68
PDCD11-204ENST00000478543 GLI2P10070 1586 aa19.23■□□□□ 0.67
PDCD11-204ENST00000478543 CSRNP3Q8WYN3 585 aa19.23■□□□□ 0.67
PDCD11-204ENST00000478543 ASXL2Q76L83 1435 aa19.23■□□□□ 0.67
PDCD11-204ENST00000478543 ABCC2Q92887 1545 aa19.22■□□□□ 0.67
PDCD11-204ENST00000478543 CUL7Q14999 1698 aa19.21■□□□□ 0.67
PDCD11-204ENST00000478543 PTPRGP23470 1445 aa19.21■□□□□ 0.67
PDCD11-204ENST00000478543 IGF1RP08069 1367 aa19.2■□□□□ 0.66
PDCD11-204ENST00000478543 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
PDCD11-204ENST00000478543 MAP3K4Q9Y6R4 1608 aa19.16■□□□□ 0.66
PDCD11-204ENST00000478543 EHMT2Q96KQ7 1210 aa19.16■□□□□ 0.66
PDCD11-204ENST00000478543 PLB1Q6P1J6 1458 aa19.16■□□□□ 0.66
PDCD11-204ENST00000478543 EPRSP07814 1512 aaKnown RBP19.13■□□□□ 0.65
PDCD11-204ENST00000478543 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
PDCD11-204ENST00000478543 TNIKQ9UKE5 1360 aa19.12■□□□□ 0.65
PDCD11-204ENST00000478543 UHRF1BP1LA0JNW5 1464 aa19.11■□□□□ 0.65
PDCD11-204ENST00000478543 PRXQ9BXM0 1461 aa19.1■□□□□ 0.65
PDCD11-204ENST00000478543 KIF21BO75037 1637 aa19.1■□□□□ 0.65
PDCD11-204ENST00000478543 DISP1Q96F81 1524 aa19.07■□□□□ 0.64
PDCD11-204ENST00000478543 KDM5BQ9UGL1 1544 aa19.06■□□□□ 0.64
PDCD11-204ENST00000478543 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
PDCD11-204ENST00000478543 LOC105371045A0A1W2PR82 267 aa19.06■□□□□ 0.64
PDCD11-204ENST00000478543 ZCCHC11Q5TAX3 1644 aaKnown RBP19.06■□□□□ 0.64
PDCD11-204ENST00000478543 UACAQ9BZF9 1416 aa19.06■□□□□ 0.64
PDCD11-204ENST00000478543 IQGAP2Q13576 1575 aa19.06■□□□□ 0.64
PDCD11-204ENST00000478543 GOLGA3Q08378 1498 aa19.04■□□□□ 0.64
PDCD11-204ENST00000478543 CARMIL2Q6F5E8 1435 aa19.04■□□□□ 0.64
PDCD11-204ENST00000478543 TEX14Q8IWB6 1497 aa19.02■□□□□ 0.63
PDCD11-204ENST00000478543 UBTFP17480 764 aaKnown RBP18.97■□□□□ 0.63
PDCD11-204ENST00000478543 FBXO41Q8TF61 875 aa18.95■□□□□ 0.62
PDCD11-204ENST00000478543 WDR7Q9Y4E6 1490 aa18.93■□□□□ 0.62
PDCD11-204ENST00000478543 KIAA0556O60303 1618 aa18.92■□□□□ 0.62
PDCD11-204ENST00000478543 UGGT2Q9NYU1 1516 aa18.92■□□□□ 0.62
PDCD11-204ENST00000478543 MAGI3Q5TCQ9 1506 aa18.89■□□□□ 0.61
PDCD11-204ENST00000478543 CTTNBP2Q8WZ74 1663 aa18.88■□□□□ 0.61
PDCD11-204ENST00000478543 CFAP43Q8NDM7 1665 aa18.87■□□□□ 0.61
PDCD11-204ENST00000478543 CD109Q6YHK3 1445 aa18.85■□□□□ 0.61
PDCD11-204ENST00000478543 RANGAP1P46060 587 aaPredicted RBP18.83■□□□□ 0.6
PDCD11-204ENST00000478543 ADAMTSL3P82987 1691 aa18.82■□□□□ 0.6
PDCD11-204ENST00000478543 PTPRMP28827 1452 aa18.81■□□□□ 0.6
PDCD11-204ENST00000478543 KCNH8Q96L42 1107 aa18.79■□□□□ 0.6
PDCD11-204ENST00000478543 ABCA8O94911 1581 aa18.79■□□□□ 0.6
PDCD11-204ENST00000478543 CEP162Q5TB80 1403 aa18.76■□□□□ 0.59
PDCD11-204ENST00000478543 ARAP3Q8WWN8 1544 aa18.76■□□□□ 0.59
PDCD11-204ENST00000478543 LMTK3Q96Q04 1460 aa18.74■□□□□ 0.59
PDCD11-204ENST00000478543 PCF11O94913 1555 aaKnown RBP18.73■□□□□ 0.59
PDCD11-204ENST00000478543 MADDQ8WXG6 1647 aa18.72■□□□□ 0.59
PDCD11-204ENST00000478543 CLIP1P30622 1438 aa18.72■□□□□ 0.59
PDCD11-204ENST00000478543 BCORL1Q5H9F3 1711 aa18.7■□□□□ 0.58
PDCD11-204ENST00000478543 FRMPD1Q5SYB0 1578 aa18.69■□□□□ 0.58
PDCD11-204ENST00000478543 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
PDCD11-204ENST00000478543 RAPGEF3O95398 923 aa18.66■□□□□ 0.58
PDCD11-204ENST00000478543 ABCA9Q8IUA7 1624 aa18.65■□□□□ 0.58
PDCD11-204ENST00000478543 P3H3Q8IVL6 736 aa18.65■□□□□ 0.58
PDCD11-204ENST00000478543 EFCAB5A4FU69 1503 aa18.64■□□□□ 0.58
PDCD11-204ENST00000478543 SAMD9Q5K651 1589 aa18.64■□□□□ 0.58
PDCD11-204ENST00000478543 ARID3CA6NKF2 412 aa18.64■□□□□ 0.57
PDCD11-204ENST00000478543 ATP10BO94823 1461 aa18.62■□□□□ 0.57
PDCD11-204ENST00000478543 RIMS1Q86UR5 1692 aaKnown RBP18.61■□□□□ 0.57
PDCD11-204ENST00000478543 FHOD3Q2V2M9 1422 aa18.61■□□□□ 0.57
PDCD11-204ENST00000478543 HSPA2P54652 639 aa18.6■□□□□ 0.57
PDCD11-204ENST00000478543 SIGLEC1Q9BZZ2 1709 aa18.6■□□□□ 0.57
PDCD11-204ENST00000478543 ILDR2Q71H61 639 aa18.58■□□□□ 0.56
PDCD11-204ENST00000478543 ARHGEF40Q8TER5 1519 aa18.54■□□□□ 0.56
PDCD11-204ENST00000478543 NEO1Q92859 1461 aa18.54■□□□□ 0.56
PDCD11-204ENST00000478543 PHLDB1Q86UU1 1377 aa18.53■□□□□ 0.56
PDCD11-204ENST00000478543 RICTORQ6R327 1708 aa18.52■□□□□ 0.55
PDCD11-204ENST00000478543 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
PDCD11-204ENST00000478543 CERKQ8TCT0 537 aa18.51■□□□□ 0.55
PDCD11-204ENST00000478543 VPS8Q8N3P4 1428 aa18.49■□□□□ 0.55
PDCD11-204ENST00000478543 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
PDCD11-204ENST00000478543 FMN1Q68DA7 1419 aa18.46■□□□□ 0.55
PDCD11-204ENST00000478543 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
PDCD11-204ENST00000478543 YEATS2Q9ULM3 1422 aa18.43■□□□□ 0.54
PDCD11-204ENST00000478543 DISP3Q9P2K9 1392 aa18.42■□□□□ 0.54
PDCD11-204ENST00000478543 NUP153P49790 1475 aaKnown RBP18.42■□□□□ 0.54
PDCD11-204ENST00000478543 SOCS7O14512 581 aa18.42■□□□□ 0.54
PDCD11-204ENST00000478543 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
PDCD11-204ENST00000478543 DENND4BO75064 1496 aaPredicted RBP18.4■□□□□ 0.54
PDCD11-204ENST00000478543 ZMYM4Q5VZL5 1548 aa18.4■□□□□ 0.54
PDCD11-204ENST00000478543 TTC37Q6PGP7 1564 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms