RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 RUSC2Q8N2Y8 1516 aa24.24■■□□□ 1.47
PDE6D-204ENST00000477748 CUL7Q14999 1698 aa24.23■■□□□ 1.47
PDE6D-204ENST00000477748 PRG4Q92954 1404 aaPredicted RBP24.22■■□□□ 1.47
PDE6D-204ENST00000477748 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
PDE6D-204ENST00000477748 KIAA0586Q9BVV6 1533 aa24.15■■□□□ 1.46
PDE6D-204ENST00000477748 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
PDE6D-204ENST00000477748 IQGAP2Q13576 1575 aa23.92■■□□□ 1.42
PDE6D-204ENST00000477748 NPM1P06748 294 aaKnown RBP eCLIP23.92■■□□□ 1.42
PDE6D-204ENST00000477748 CARMIL2Q6F5E8 1435 aa23.92■■□□□ 1.42
PDE6D-204ENST00000477748 MAPKBP1O60336 1514 aa23.91■■□□□ 1.42
PDE6D-204ENST00000477748 RAPGEF2Q9Y4G8 1499 aa23.91■■□□□ 1.42
PDE6D-204ENST00000477748 ADCY10Q96PN6 1610 aa23.91■■□□□ 1.42
PDE6D-204ENST00000477748 PTPRGP23470 1445 aa23.88■■□□□ 1.41
PDE6D-204ENST00000477748 TNIKQ9UKE5 1360 aa23.87■■□□□ 1.41
PDE6D-204ENST00000477748 ABCC10Q5T3U5 1492 aa23.85■■□□□ 1.41
PDE6D-204ENST00000477748 KIF13AQ9H1H9 1805 aa23.84■■□□□ 1.41
PDE6D-204ENST00000477748 UGGT2Q9NYU1 1516 aa23.79■■□□□ 1.4
PDE6D-204ENST00000477748 FAM69CQ0P6D2 419 aa23.78■■□□□ 1.4
PDE6D-204ENST00000477748 DISP1Q96F81 1524 aa23.78■■□□□ 1.4
PDE6D-204ENST00000477748 DIP2BQ9P265 1576 aa23.78■■□□□ 1.4
PDE6D-204ENST00000477748 ABCC2Q92887 1545 aa23.75■■□□□ 1.39
PDE6D-204ENST00000477748 UHRF1BP1LA0JNW5 1464 aa23.74■■□□□ 1.39
PDE6D-204ENST00000477748 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
PDE6D-204ENST00000477748 PRXQ9BXM0 1461 aa23.72■■□□□ 1.39
PDE6D-204ENST00000477748 UACAQ9BZF9 1416 aa23.71■■□□□ 1.39
PDE6D-204ENST00000477748 KIAA0556O60303 1618 aa23.7■■□□□ 1.39
PDE6D-204ENST00000477748 CSRNP3Q8WYN3 585 aa23.67■■□□□ 1.38
PDE6D-204ENST00000477748 CTTNBP2Q8WZ74 1663 aa23.67■■□□□ 1.38
PDE6D-204ENST00000477748 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
PDE6D-204ENST00000477748 EEA1Q15075 1411 aa23.65■■□□□ 1.38
PDE6D-204ENST00000477748 GOLGA3Q08378 1498 aa23.64■■□□□ 1.38
PDE6D-204ENST00000477748 ASXL2Q76L83 1435 aa23.63■■□□□ 1.37
PDE6D-204ENST00000477748 KDM5BQ9UGL1 1544 aa23.61■■□□□ 1.37
PDE6D-204ENST00000477748 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
PDE6D-204ENST00000477748 GLI2P10070 1586 aa23.57■■□□□ 1.36
PDE6D-204ENST00000477748 KDM6BO15054 1643 aa23.52■■□□□ 1.36
PDE6D-204ENST00000477748 ILDR1Q86SU0 546 aaPredicted RBP23.52■■□□□ 1.36
PDE6D-204ENST00000477748 ZCCHC11Q5TAX3 1644 aaKnown RBP23.51■■□□□ 1.35
PDE6D-204ENST00000477748 TSPOAP1O95153 1857 aa23.5■■□□□ 1.35
PDE6D-204ENST00000477748 EPRSP07814 1512 aaKnown RBP23.49■■□□□ 1.35
PDE6D-204ENST00000477748 KDM4FA0A1W2PPD8 638 aa23.48■■□□□ 1.35
PDE6D-204ENST00000477748 ABCA8O94911 1581 aa23.47■■□□□ 1.35
PDE6D-204ENST00000477748 WDR7Q9Y4E6 1490 aa23.45■■□□□ 1.34
PDE6D-204ENST00000477748 KIF21BO75037 1637 aa23.42■■□□□ 1.34
PDE6D-204ENST00000477748 PPRC1Q5VV67 1664 aaKnown RBP23.41■■□□□ 1.34
PDE6D-204ENST00000477748 MAP3K4Q9Y6R4 1608 aa23.41■■□□□ 1.34
PDE6D-204ENST00000477748 TEX14Q8IWB6 1497 aa23.4■■□□□ 1.34
PDE6D-204ENST00000477748 SAMD9Q5K651 1589 aa23.38■■□□□ 1.33
PDE6D-204ENST00000477748 P3H3Q8IVL6 736 aa23.33■■□□□ 1.33
PDE6D-204ENST00000477748 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
PDE6D-204ENST00000477748 RANGAP1P46060 587 aaPredicted RBP23.3■■□□□ 1.32
PDE6D-204ENST00000477748 MAGI3Q5TCQ9 1506 aa23.28■■□□□ 1.32
PDE6D-204ENST00000477748 CD109Q6YHK3 1445 aa23.27■■□□□ 1.32
PDE6D-204ENST00000477748 UBTFP17480 764 aaKnown RBP23.27■■□□□ 1.32
PDE6D-204ENST00000477748 CFAP43Q8NDM7 1665 aa23.27■■□□□ 1.32
PDE6D-204ENST00000477748 ATP10BO94823 1461 aa23.26■■□□□ 1.31
PDE6D-204ENST00000477748 COL17A1Q9UMD9 1497 aaPredicted RBP23.25■■□□□ 1.31
PDE6D-204ENST00000477748 RAPGEF6Q8TEU7 1601 aa23.24■■□□□ 1.31
PDE6D-204ENST00000477748 KCNH8Q96L42 1107 aa23.24■■□□□ 1.31
PDE6D-204ENST00000477748 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
PDE6D-204ENST00000477748 FHOD3Q2V2M9 1422 aa23.2■■□□□ 1.3
PDE6D-204ENST00000477748 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
PDE6D-204ENST00000477748 NUP153P49790 1475 aaKnown RBP23.17■■□□□ 1.3
PDE6D-204ENST00000477748 ABCA9Q8IUA7 1624 aa23.13■■□□□ 1.29
PDE6D-204ENST00000477748 ADGRL1O94910 1474 aa23.12■■□□□ 1.29
PDE6D-204ENST00000477748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.11■■□□□ 1.29
PDE6D-204ENST00000477748 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
PDE6D-204ENST00000477748 PHLDB1Q86UU1 1377 aa23.1■■□□□ 1.29
PDE6D-204ENST00000477748 ARAP3Q8WWN8 1544 aa23.08■■□□□ 1.29
PDE6D-204ENST00000477748 HECW2Q9P2P5 1572 aa23.06■■□□□ 1.28
PDE6D-204ENST00000477748 NEO1Q92859 1461 aa23.03■■□□□ 1.28
PDE6D-204ENST00000477748 ARHGAP35Q9NRY4 1499 aa23.03■■□□□ 1.28
PDE6D-204ENST00000477748 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
PDE6D-204ENST00000477748 FMN1Q68DA7 1419 aa23.01■■□□□ 1.27
PDE6D-204ENST00000477748 HECW1Q76N89 1606 aa22.93■■□□□ 1.26
PDE6D-204ENST00000477748 CDK13Q14004 1512 aaKnown RBP22.92■■□□□ 1.26
PDE6D-204ENST00000477748 ATP1B4Q9UN42 357 aaPredicted RBP22.91■■□□□ 1.26
PDE6D-204ENST00000477748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.91■■□□□ 1.26
PDE6D-204ENST00000477748 CFAP74Q9C0B2 1584 aa22.89■■□□□ 1.26
PDE6D-204ENST00000477748 FANCAO15360 1455 aa22.88■■□□□ 1.25
PDE6D-204ENST00000477748 RAPGEF3O95398 923 aa22.87■■□□□ 1.25
PDE6D-204ENST00000477748 TTC37Q6PGP7 1564 aa22.87■■□□□ 1.25
PDE6D-204ENST00000477748 FRMPD1Q5SYB0 1578 aa22.86■■□□□ 1.25
PDE6D-204ENST00000477748 CLIP1P30622 1438 aa22.85■■□□□ 1.25
PDE6D-204ENST00000477748 AKNAQ7Z591 1439 aa22.85■■□□□ 1.25
PDE6D-204ENST00000477748 CDK11AQ9UQ88 783 aaPredicted RBP22.85■■□□□ 1.25
PDE6D-204ENST00000477748 DENND4BO75064 1496 aaPredicted RBP22.85■■□□□ 1.25
PDE6D-204ENST00000477748 PLCH2O75038 1416 aa22.8■■□□□ 1.24
PDE6D-204ENST00000477748 ARHGEF40Q8TER5 1519 aa22.78■■□□□ 1.24
PDE6D-204ENST00000477748 FBXO41Q8TF61 875 aa22.78■■□□□ 1.24
PDE6D-204ENST00000477748 RICTORQ6R327 1708 aa22.77■■□□□ 1.24
PDE6D-204ENST00000477748 PCF11O94913 1555 aaKnown RBP22.77■■□□□ 1.24
PDE6D-204ENST00000477748 TROQ12816 1431 aaPredicted RBP22.77■■□□□ 1.24
PDE6D-204ENST00000477748 CASKIN1Q8WXD9 1431 aa22.76■■□□□ 1.23
PDE6D-204ENST00000477748 KIF14Q15058 1648 aa22.76■■□□□ 1.23
PDE6D-204ENST00000477748 LRRIQ1Q96JM4 1722 aa22.76■■□□□ 1.23
PDE6D-204ENST00000477748 ZMYM4Q5VZL5 1548 aa22.76■■□□□ 1.23
PDE6D-204ENST00000477748 CCDC18Q5T9S5 1454 aa22.74■■□□□ 1.23
PDE6D-204ENST00000477748 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
PDE6D-204ENST00000477748 MAGI2Q86UL8 1455 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms