RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 MAPKBP1O60336 1514 aa13.69□□□□□ -0.22
PRPF3-205ENST00000476970 FAM69CQ0P6D2 419 aa13.67□□□□□ -0.22
PRPF3-205ENST00000476970 KDM4FA0A1W2PPD8 638 aa13.66□□□□□ -0.22
PRPF3-205ENST00000476970 FHAD1B1AJZ9 1412 aa13.64□□□□□ -0.23
PRPF3-205ENST00000476970 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
PRPF3-205ENST00000476970 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
PRPF3-205ENST00000476970 TSPOAP1O95153 1857 aa13.63□□□□□ -0.23
PRPF3-205ENST00000476970 POTEDQ86YR6 584 aa13.62□□□□□ -0.23
PRPF3-205ENST00000476970 ERICH3Q5RHP9 1530 aa13.6□□□□□ -0.23
PRPF3-205ENST00000476970 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
PRPF3-205ENST00000476970 ADCY10Q96PN6 1610 aa13.58□□□□□ -0.24
PRPF3-205ENST00000476970 RUSC2Q8N2Y8 1516 aa13.57□□□□□ -0.24
PRPF3-205ENST00000476970 JPH4Q96JJ6 628 aa13.54□□□□□ -0.24
PRPF3-205ENST00000476970 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
PRPF3-205ENST00000476970 ADGRL1O94910 1474 aa13.53□□□□□ -0.24
PRPF3-205ENST00000476970 HECW2Q9P2P5 1572 aa13.53□□□□□ -0.24
PRPF3-205ENST00000476970 TOP2BQ02880 1626 aa13.52□□□□□ -0.25
PRPF3-205ENST00000476970 PPRC1Q5VV67 1664 aaKnown RBP13.45□□□□□ -0.26
PRPF3-205ENST00000476970 GLI2P10070 1586 aa13.44□□□□□ -0.26
PRPF3-205ENST00000476970 MSH5O43196 834 aa13.42□□□□□ -0.26
PRPF3-205ENST00000476970 PLB1Q6P1J6 1458 aa13.41□□□□□ -0.26
PRPF3-205ENST00000476970 KIAA0586Q9BVV6 1533 aa13.4□□□□□ -0.26
PRPF3-205ENST00000476970 ABCC2Q92887 1545 aa13.39□□□□□ -0.27
PRPF3-205ENST00000476970 TEX14Q8IWB6 1497 aa13.37□□□□□ -0.27
PRPF3-205ENST00000476970 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
PRPF3-205ENST00000476970 ASXL2Q76L83 1435 aa13.37□□□□□ -0.27
PRPF3-205ENST00000476970 CUL7Q14999 1698 aa13.37□□□□□ -0.27
PRPF3-205ENST00000476970 PTPRGP23470 1445 aa13.35□□□□□ -0.27
PRPF3-205ENST00000476970 MAP3K4Q9Y6R4 1608 aa13.35□□□□□ -0.27
PRPF3-205ENST00000476970 CARMIL2Q6F5E8 1435 aa13.32□□□□□ -0.28
PRPF3-205ENST00000476970 TNIKQ9UKE5 1360 aa13.31□□□□□ -0.28
PRPF3-205ENST00000476970 UHRF1BP1LA0JNW5 1464 aa13.3□□□□□ -0.28
PRPF3-205ENST00000476970 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
PRPF3-205ENST00000476970 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
PRPF3-205ENST00000476970 UACAQ9BZF9 1416 aa13.25□□□□□ -0.29
PRPF3-205ENST00000476970 TTBK1Q5TCY1 1321 aaPredicted RBP13.25□□□□□ -0.29
PRPF3-205ENST00000476970 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
PRPF3-205ENST00000476970 ZCCHC11Q5TAX3 1644 aaKnown RBP13.24□□□□□ -0.29
PRPF3-205ENST00000476970 KDM5BQ9UGL1 1544 aa13.23□□□□□ -0.29
PRPF3-205ENST00000476970 KIF27Q86VH2 1401 aa13.22□□□□□ -0.29
PRPF3-205ENST00000476970 KIF21BO75037 1637 aa13.21□□□□□ -0.29
PRPF3-205ENST00000476970 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.3
PRPF3-205ENST00000476970 IGF1RP08069 1367 aa13.2□□□□□ -0.3
PRPF3-205ENST00000476970 LMTK3Q96Q04 1460 aa13.2□□□□□ -0.3
PRPF3-205ENST00000476970 WDR7Q9Y4E6 1490 aa13.18□□□□□ -0.3
PRPF3-205ENST00000476970 MAGI3Q5TCQ9 1506 aa13.17□□□□□ -0.3
PRPF3-205ENST00000476970 DISP1Q96F81 1524 aa13.15□□□□□ -0.3
PRPF3-205ENST00000476970 CARMIL1Q5VZK9 1371 aa13.14□□□□□ -0.31
PRPF3-205ENST00000476970 PCF11O94913 1555 aaKnown RBP13.13□□□□□ -0.31
PRPF3-205ENST00000476970 KIAA0556O60303 1618 aa13.13□□□□□ -0.31
PRPF3-205ENST00000476970 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
PRPF3-205ENST00000476970 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
PRPF3-205ENST00000476970 PTPRMP28827 1452 aa13.12□□□□□ -0.31
PRPF3-205ENST00000476970 SUPT5HO00267 1087 aaKnown RBP13.12□□□□□ -0.31
PRPF3-205ENST00000476970 PLPPR3Q6T4P5 718 aa13.12□□□□□ -0.31
PRPF3-205ENST00000476970 PIAS4Q8N2W9 510 aaPredicted RBP13.11□□□□□ -0.31
PRPF3-205ENST00000476970 UGGT2Q9NYU1 1516 aa13.11□□□□□ -0.31
PRPF3-205ENST00000476970 ARAP3Q8WWN8 1544 aa13.08□□□□□ -0.32
PRPF3-205ENST00000476970 BCORL1Q5H9F3 1711 aa13.06□□□□□ -0.32
PRPF3-205ENST00000476970 MADDQ8WXG6 1647 aa13.05□□□□□ -0.32
PRPF3-205ENST00000476970 SOCS7O14512 581 aa13.03□□□□□ -0.32
PRPF3-205ENST00000476970 PHLDB1Q86UU1 1377 aa13.02□□□□□ -0.33
PRPF3-205ENST00000476970 KCNH8Q96L42 1107 aa13.01□□□□□ -0.33
PRPF3-205ENST00000476970 DISP3Q9P2K9 1392 aa13.01□□□□□ -0.33
PRPF3-205ENST00000476970 CTTNBP2Q8WZ74 1663 aa13.01□□□□□ -0.33
PRPF3-205ENST00000476970 RIMS1Q86UR5 1692 aaKnown RBP13□□□□□ -0.33
PRPF3-205ENST00000476970 ABCA8O94911 1581 aa13□□□□□ -0.33
PRPF3-205ENST00000476970 GOLGA3Q08378 1498 aa13□□□□□ -0.33
PRPF3-205ENST00000476970 RAPGEF2Q9Y4G8 1499 aa13□□□□□ -0.33
PRPF3-205ENST00000476970 ABCA9Q8IUA7 1624 aa12.98□□□□□ -0.33
PRPF3-205ENST00000476970 CERKQ8TCT0 537 aa12.97□□□□□ -0.33
PRPF3-205ENST00000476970 ARID4BQ4LE39 1312 aaPredicted RBP12.96□□□□□ -0.33
PRPF3-205ENST00000476970 ARHGEF40Q8TER5 1519 aa12.96□□□□□ -0.33
PRPF3-205ENST00000476970 NEO1Q92859 1461 aa12.96□□□□□ -0.34
PRPF3-205ENST00000476970 SPATA31D1Q6ZQQ2 1576 aa12.95□□□□□ -0.34
PRPF3-205ENST00000476970 ILDR2Q71H61 639 aa12.93□□□□□ -0.34
PRPF3-205ENST00000476970 FRMPD1Q5SYB0 1578 aa12.93□□□□□ -0.34
PRPF3-205ENST00000476970 POGZQ7Z3K3 1410 aa12.91□□□□□ -0.34
PRPF3-205ENST00000476970 FAM9AQ8IZU1 332 aaPredicted RBP12.91□□□□□ -0.34
PRPF3-205ENST00000476970 HSPA2P54652 639 aa12.9□□□□□ -0.34
PRPF3-205ENST00000476970 FANCAO15360 1455 aa12.9□□□□□ -0.34
PRPF3-205ENST00000476970 RAPGEF3O95398 923 aa12.89□□□□□ -0.35
PRPF3-205ENST00000476970 FER1L4A9Z1Z3 1794 aa12.89□□□□□ -0.35
PRPF3-205ENST00000476970 RICTORQ6R327 1708 aa12.88□□□□□ -0.35
PRPF3-205ENST00000476970 PREX1Q8TCU6 1659 aa12.87□□□□□ -0.35
PRPF3-205ENST00000476970 CFAP74Q9C0B2 1584 aa12.87□□□□□ -0.35
PRPF3-205ENST00000476970 PPP6R1Q9UPN7 881 aa12.87□□□□□ -0.35
PRPF3-205ENST00000476970 TTC37Q6PGP7 1564 aa12.86□□□□□ -0.35
PRPF3-205ENST00000476970 AKNAQ7Z591 1439 aa12.85□□□□□ -0.35
PRPF3-205ENST00000476970 ATP10BO94823 1461 aa12.85□□□□□ -0.35
PRPF3-205ENST00000476970 EFCAB5A4FU69 1503 aa12.84□□□□□ -0.35
PRPF3-205ENST00000476970 DENND4BO75064 1496 aaPredicted RBP12.84□□□□□ -0.35
PRPF3-205ENST00000476970 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.35
PRPF3-205ENST00000476970 ZFYVE16Q7Z3T8 1539 aa12.82□□□□□ -0.36
PRPF3-205ENST00000476970 FHOD3Q2V2M9 1422 aa12.81□□□□□ -0.36
PRPF3-205ENST00000476970 ADRA2BP18089 450 aa12.81□□□□□ -0.36
PRPF3-205ENST00000476970 DMRT2Q9Y5R5 561 aa12.81□□□□□ -0.36
PRPF3-205ENST00000476970 RAPGEF6Q8TEU7 1601 aa12.8□□□□□ -0.36
PRPF3-205ENST00000476970 YEATS2Q9ULM3 1422 aa12.8□□□□□ -0.36
PRPF3-205ENST00000476970 ARID3CA6NKF2 412 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms