RNA–Protein interactions for RNA: ENST00000476680.1

TNC-206, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-206ENST00000476680 SHROOM2Q13796 1616 aa13.81□□□□□ -0.2
TNC-206ENST00000476680 SUPT5HO00267 1087 aaKnown RBP13.79□□□□□ -0.2
TNC-206ENST00000476680 TTBK1Q5TCY1 1321 aaPredicted RBP13.77□□□□□ -0.21
TNC-206ENST00000476680 KDM6BO15054 1643 aa13.76□□□□□ -0.21
TNC-206ENST00000476680 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
TNC-206ENST00000476680 DIP2BQ9P265 1576 aa13.73□□□□□ -0.21
TNC-206ENST00000476680 MAPKBP1O60336 1514 aa13.72□□□□□ -0.21
TNC-206ENST00000476680 TOP2BQ02880 1626 aa13.69□□□□□ -0.22
TNC-206ENST00000476680 TSPOAP1O95153 1857 aa13.69□□□□□ -0.22
TNC-206ENST00000476680 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
TNC-206ENST00000476680 RUSC2Q8N2Y8 1516 aa13.66□□□□□ -0.22
TNC-206ENST00000476680 BIVM-ERCC5R4GMW8 1640 aa13.66□□□□□ -0.22
TNC-206ENST00000476680 PTPRGP23470 1445 aa13.63□□□□□ -0.23
TNC-206ENST00000476680 ADGRL1O94910 1474 aa13.62□□□□□ -0.23
TNC-206ENST00000476680 KIAA0586Q9BVV6 1533 aa13.6□□□□□ -0.23
TNC-206ENST00000476680 ASXL2Q76L83 1435 aa13.57□□□□□ -0.24
TNC-206ENST00000476680 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
TNC-206ENST00000476680 CARMIL2Q6F5E8 1435 aa13.55□□□□□ -0.24
TNC-206ENST00000476680 PLB1Q6P1J6 1458 aa13.55□□□□□ -0.24
TNC-206ENST00000476680 IGF1RP08069 1367 aa13.54□□□□□ -0.24
TNC-206ENST00000476680 ABCC2Q92887 1545 aa13.54□□□□□ -0.24
TNC-206ENST00000476680 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
TNC-206ENST00000476680 KIF27Q86VH2 1401 aa13.51□□□□□ -0.25
TNC-206ENST00000476680 COL17A1Q9UMD9 1497 aaPredicted RBP13.49□□□□□ -0.25
TNC-206ENST00000476680 CARMIL1Q5VZK9 1371 aa13.47□□□□□ -0.25
TNC-206ENST00000476680 GLI2P10070 1586 aa13.47□□□□□ -0.25
TNC-206ENST00000476680 TEX14Q8IWB6 1497 aa13.47□□□□□ -0.25
TNC-206ENST00000476680 UACAQ9BZF9 1416 aa13.47□□□□□ -0.25
TNC-206ENST00000476680 PPRC1Q5VV67 1664 aaKnown RBP13.46□□□□□ -0.26
TNC-206ENST00000476680 EPRSP07814 1512 aaKnown RBP13.45□□□□□ -0.26
TNC-206ENST00000476680 CUL7Q14999 1698 aa13.45□□□□□ -0.26
TNC-206ENST00000476680 FBXO41Q8TF61 875 aa13.43□□□□□ -0.26
TNC-206ENST00000476680 UHRF1BP1LA0JNW5 1464 aa13.42□□□□□ -0.26
TNC-206ENST00000476680 KCNH8Q96L42 1107 aa13.41□□□□□ -0.26
TNC-206ENST00000476680 IQGAP2Q13576 1575 aa13.41□□□□□ -0.26
TNC-206ENST00000476680 MAP3K4Q9Y6R4 1608 aa13.38□□□□□ -0.27
TNC-206ENST00000476680 KDM5BQ9UGL1 1544 aa13.38□□□□□ -0.27
TNC-206ENST00000476680 DISP1Q96F81 1524 aa13.36□□□□□ -0.27
TNC-206ENST00000476680 CD109Q6YHK3 1445 aa13.36□□□□□ -0.27
TNC-206ENST00000476680 WDR7Q9Y4E6 1490 aa13.36□□□□□ -0.27
TNC-206ENST00000476680 ZCCHC11Q5TAX3 1644 aaKnown RBP13.35□□□□□ -0.27
TNC-206ENST00000476680 ARID3CA6NKF2 412 aa13.32□□□□□ -0.28
TNC-206ENST00000476680 UGGT2Q9NYU1 1516 aa13.29□□□□□ -0.28
TNC-206ENST00000476680 ARID4BQ4LE39 1312 aaPredicted RBP13.28□□□□□ -0.28
TNC-206ENST00000476680 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
TNC-206ENST00000476680 MAGI3Q5TCQ9 1506 aa13.28□□□□□ -0.28
TNC-206ENST00000476680 KIAA0556O60303 1618 aa13.28□□□□□ -0.28
TNC-206ENST00000476680 KIF21BO75037 1637 aa13.28□□□□□ -0.28
TNC-206ENST00000476680 PLPPR3Q6T4P5 718 aa13.27□□□□□ -0.29
TNC-206ENST00000476680 PTPRMP28827 1452 aa13.24□□□□□ -0.29
TNC-206ENST00000476680 FAM9AQ8IZU1 332 aaPredicted RBP13.24□□□□□ -0.29
TNC-206ENST00000476680 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
TNC-206ENST00000476680 LMTK3Q96Q04 1460 aa13.22□□□□□ -0.29
TNC-206ENST00000476680 CFAP43Q8NDM7 1665 aa13.21□□□□□ -0.29
TNC-206ENST00000476680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
TNC-206ENST00000476680 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
TNC-206ENST00000476680 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
TNC-206ENST00000476680 GOLGA3Q08378 1498 aa13.2□□□□□ -0.3
TNC-206ENST00000476680 HSPA2P54652 639 aa13.19□□□□□ -0.3
TNC-206ENST00000476680 ARAP3Q8WWN8 1544 aa13.18□□□□□ -0.3
TNC-206ENST00000476680 ABCA8O94911 1581 aa13.16□□□□□ -0.3
TNC-206ENST00000476680 PCF11O94913 1555 aaKnown RBP13.16□□□□□ -0.3
TNC-206ENST00000476680 PHLDB1Q86UU1 1377 aa13.14□□□□□ -0.31
TNC-206ENST00000476680 ADAMTSL3P82987 1691 aa13.13□□□□□ -0.31
TNC-206ENST00000476680 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
TNC-206ENST00000476680 DISP3Q9P2K9 1392 aa13.12□□□□□ -0.31
TNC-206ENST00000476680 ATP10BO94823 1461 aa13.11□□□□□ -0.31
TNC-206ENST00000476680 MADDQ8WXG6 1647 aa13.11□□□□□ -0.31
TNC-206ENST00000476680 MLECQ14165 292 aa13.1□□□□□ -0.31
TNC-206ENST00000476680 RANGAP1P46060 587 aaPredicted RBP13.09□□□□□ -0.31
TNC-206ENST00000476680 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
TNC-206ENST00000476680 ILDR2Q71H61 639 aa13.08□□□□□ -0.32
TNC-206ENST00000476680 NEO1Q92859 1461 aa13.08□□□□□ -0.32
TNC-206ENST00000476680 CTTNBP2Q8WZ74 1663 aa13.08□□□□□ -0.32
TNC-206ENST00000476680 RIMS1Q86UR5 1692 aaKnown RBP13.06□□□□□ -0.32
TNC-206ENST00000476680 ABCA9Q8IUA7 1624 aa13.06□□□□□ -0.32
TNC-206ENST00000476680 SOCS7O14512 581 aa13.05□□□□□ -0.32
TNC-206ENST00000476680 POGZQ7Z3K3 1410 aa13.05□□□□□ -0.32
TNC-206ENST00000476680 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
TNC-206ENST00000476680 FRMPD1Q5SYB0 1578 aa13.03□□□□□ -0.32
TNC-206ENST00000476680 AKNAQ7Z591 1439 aa13.02□□□□□ -0.33
TNC-206ENST00000476680 FANCAO15360 1455 aa13.02□□□□□ -0.33
TNC-206ENST00000476680 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
TNC-206ENST00000476680 ARHGEF40Q8TER5 1519 aa13.01□□□□□ -0.33
TNC-206ENST00000476680 PRXQ9BXM0 1461 aa12.99□□□□□ -0.33
TNC-206ENST00000476680 YEATS2Q9ULM3 1422 aa12.98□□□□□ -0.33
TNC-206ENST00000476680 CEBPAP49715 358 aaPredicted RBP12.97□□□□□ -0.33
TNC-206ENST00000476680 RAPGEF6Q8TEU7 1601 aa12.97□□□□□ -0.33
TNC-206ENST00000476680 FHOD3Q2V2M9 1422 aa12.96□□□□□ -0.33
TNC-206ENST00000476680 ZFYVE16Q7Z3T8 1539 aa12.96□□□□□ -0.33
TNC-206ENST00000476680 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
TNC-206ENST00000476680 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
TNC-206ENST00000476680 NUP153P49790 1475 aaKnown RBP12.94□□□□□ -0.34
TNC-206ENST00000476680 EFCAB5A4FU69 1503 aa12.93□□□□□ -0.34
TNC-206ENST00000476680 ATP1B4Q9UN42 357 aaPredicted RBP12.92□□□□□ -0.34
TNC-206ENST00000476680 RICTORQ6R327 1708 aa12.91□□□□□ -0.34
TNC-206ENST00000476680 SCAPERQ9BY12 1400 aa12.91□□□□□ -0.34
TNC-206ENST00000476680 CFAP74Q9C0B2 1584 aa12.9□□□□□ -0.34
TNC-206ENST00000476680 SPATA31D1Q6ZQQ2 1576 aa12.9□□□□□ -0.35
TNC-206ENST00000476680 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms