RNA–Protein interactions for RNA: ENST00000476448.1

MCM3-204, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 2

Gene MCM3, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-204ENST00000476448 TOP2BQ02880 1626 aa25.35■■□□□ 1.65
MCM3-204ENST00000476448 NPM1P06748 294 aaKnown RBP eCLIP25.35■■□□□ 1.65
MCM3-204ENST00000476448 ILDR1Q86SU0 546 aaPredicted RBP25.34■■□□□ 1.65
MCM3-204ENST00000476448 BIVM-ERCC5R4GMW8 1640 aa25.33■■□□□ 1.65
MCM3-204ENST00000476448 DIP2BQ9P265 1576 aa25.32■■□□□ 1.64
MCM3-204ENST00000476448 MAPKBP1O60336 1514 aa25.32■■□□□ 1.64
MCM3-204ENST00000476448 ADCY10Q96PN6 1610 aa25.27■■□□□ 1.64
MCM3-204ENST00000476448 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
MCM3-204ENST00000476448 RUSC2Q8N2Y8 1516 aa25.25■■□□□ 1.63
MCM3-204ENST00000476448 KDM6BO15054 1643 aa25.23■■□□□ 1.63
MCM3-204ENST00000476448 TSPOAP1O95153 1857 aa25.11■■□□□ 1.61
MCM3-204ENST00000476448 KIAA0586Q9BVV6 1533 aa25.1■■□□□ 1.61
MCM3-204ENST00000476448 IGF1RP08069 1367 aa25.06■■□□□ 1.6
MCM3-204ENST00000476448 TTBK1Q5TCY1 1321 aaPredicted RBP25.04■■□□□ 1.6
MCM3-204ENST00000476448 PTPRGP23470 1445 aa25.03■■□□□ 1.6
MCM3-204ENST00000476448 ADGRL1O94910 1474 aa24.99■■□□□ 1.59
MCM3-204ENST00000476448 COL17A1Q9UMD9 1497 aaPredicted RBP24.98■■□□□ 1.59
MCM3-204ENST00000476448 ASXL2Q76L83 1435 aa24.96■■□□□ 1.59
MCM3-204ENST00000476448 PPRC1Q5VV67 1664 aaKnown RBP24.94■■□□□ 1.58
MCM3-204ENST00000476448 ABCC2Q92887 1545 aa24.94■■□□□ 1.58
MCM3-204ENST00000476448 TNIKQ9UKE5 1360 aa24.91■■□□□ 1.58
MCM3-204ENST00000476448 GLI2P10070 1586 aa24.9■■□□□ 1.58
MCM3-204ENST00000476448 PLB1Q6P1J6 1458 aa24.89■■□□□ 1.58
MCM3-204ENST00000476448 KIF27Q86VH2 1401 aa24.86■■□□□ 1.57
MCM3-204ENST00000476448 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.57
MCM3-204ENST00000476448 HECW2Q9P2P5 1572 aa24.83■■□□□ 1.57
MCM3-204ENST00000476448 CUL7Q14999 1698 aa24.82■■□□□ 1.56
MCM3-204ENST00000476448 CARMIL2Q6F5E8 1435 aa24.82■■□□□ 1.56
MCM3-204ENST00000476448 UHRF1BP1LA0JNW5 1464 aa24.82■■□□□ 1.56
MCM3-204ENST00000476448 UACAQ9BZF9 1416 aa24.8■■□□□ 1.56
MCM3-204ENST00000476448 EPRSP07814 1512 aaKnown RBP24.8■■□□□ 1.56
MCM3-204ENST00000476448 DISP1Q96F81 1524 aa24.75■■□□□ 1.55
MCM3-204ENST00000476448 KDM5BQ9UGL1 1544 aa24.73■■□□□ 1.55
MCM3-204ENST00000476448 MAP3K4Q9Y6R4 1608 aa24.72■■□□□ 1.55
MCM3-204ENST00000476448 IQGAP2Q13576 1575 aa24.7■■□□□ 1.54
MCM3-204ENST00000476448 TEX14Q8IWB6 1497 aa24.67■■□□□ 1.54
MCM3-204ENST00000476448 ZCCHC11Q5TAX3 1644 aaKnown RBP24.62■■□□□ 1.53
MCM3-204ENST00000476448 UGGT2Q9NYU1 1516 aa24.57■■□□□ 1.52
MCM3-204ENST00000476448 WDR7Q9Y4E6 1490 aa24.57■■□□□ 1.52
MCM3-204ENST00000476448 FBXO41Q8TF61 875 aa24.54■■□□□ 1.52
MCM3-204ENST00000476448 CD109Q6YHK3 1445 aa24.52■■□□□ 1.52
MCM3-204ENST00000476448 KCNH8Q96L42 1107 aa24.52■■□□□ 1.52
MCM3-204ENST00000476448 KIAA0556O60303 1618 aa24.51■■□□□ 1.51
MCM3-204ENST00000476448 MAGI3Q5TCQ9 1506 aa24.51■■□□□ 1.51
MCM3-204ENST00000476448 RAPGEF2Q9Y4G8 1499 aa24.47■■□□□ 1.51
MCM3-204ENST00000476448 KIF21BO75037 1637 aa24.41■■□□□ 1.5
MCM3-204ENST00000476448 CFAP43Q8NDM7 1665 aa24.38■■□□□ 1.49
MCM3-204ENST00000476448 ABCA8O94911 1581 aa24.37■■□□□ 1.49
MCM3-204ENST00000476448 PTPRMP28827 1452 aa24.34■■□□□ 1.49
MCM3-204ENST00000476448 ARAP3Q8WWN8 1544 aa24.33■■□□□ 1.49
MCM3-204ENST00000476448 ARID3CA6NKF2 412 aa24.3■■□□□ 1.48
MCM3-204ENST00000476448 RAPGEF3O95398 923 aa24.28■■□□□ 1.48
MCM3-204ENST00000476448 ADAMTSL3P82987 1691 aa24.27■■□□□ 1.48
MCM3-204ENST00000476448 GOLGA3Q08378 1498 aa24.25■■□□□ 1.47
MCM3-204ENST00000476448 ATP10BO94823 1461 aa24.23■■□□□ 1.47
MCM3-204ENST00000476448 P3H3Q8IVL6 736 aa24.19■■□□□ 1.46
MCM3-204ENST00000476448 LMTK3Q96Q04 1460 aa24.19■■□□□ 1.46
MCM3-204ENST00000476448 PHLDB1Q86UU1 1377 aa24.16■■□□□ 1.46
MCM3-204ENST00000476448 PCF11O94913 1555 aaKnown RBP24.16■■□□□ 1.46
MCM3-204ENST00000476448 CTTNBP2Q8WZ74 1663 aa24.16■■□□□ 1.46
MCM3-204ENST00000476448 ARID4BQ4LE39 1312 aaPredicted RBP24.14■■□□□ 1.46
MCM3-204ENST00000476448 HSPA2P54652 639 aa24.13■■□□□ 1.45
MCM3-204ENST00000476448 MADDQ8WXG6 1647 aa24.13■■□□□ 1.45
MCM3-204ENST00000476448 ABCA9Q8IUA7 1624 aa24.12■■□□□ 1.45
MCM3-204ENST00000476448 BCORL1Q5H9F3 1711 aa24.12■■□□□ 1.45
MCM3-204ENST00000476448 PRXQ9BXM0 1461 aa24.11■■□□□ 1.45
MCM3-204ENST00000476448 FRMPD1Q5SYB0 1578 aa24.11■■□□□ 1.45
MCM3-204ENST00000476448 NEO1Q92859 1461 aa24.09■■□□□ 1.45
MCM3-204ENST00000476448 PLPPR3Q6T4P5 718 aa24.04■■□□□ 1.44
MCM3-204ENST00000476448 CERKQ8TCT0 537 aa24.02■■□□□ 1.44
MCM3-204ENST00000476448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.99■■□□□ 1.43
MCM3-204ENST00000476448 HNRNPUL2Q1KMD3 747 aaKnown RBP23.99■■□□□ 1.43
MCM3-204ENST00000476448 RIMS1Q86UR5 1692 aaKnown RBP23.99■■□□□ 1.43
MCM3-204ENST00000476448 FAM9AQ8IZU1 332 aaPredicted RBP23.97■■□□□ 1.43
MCM3-204ENST00000476448 ILDR2Q71H61 639 aa23.96■■□□□ 1.43
MCM3-204ENST00000476448 ARHGEF40Q8TER5 1519 aa23.94■■□□□ 1.42
MCM3-204ENST00000476448 DENND4BO75064 1496 aaPredicted RBP23.94■■□□□ 1.42
MCM3-204ENST00000476448 NUP153P49790 1475 aaKnown RBP23.93■■□□□ 1.42
MCM3-204ENST00000476448 FHOD3Q2V2M9 1422 aa23.93■■□□□ 1.42
MCM3-204ENST00000476448 AKNAQ7Z591 1439 aa23.93■■□□□ 1.42
MCM3-204ENST00000476448 RAPGEF6Q8TEU7 1601 aa23.92■■□□□ 1.42
MCM3-204ENST00000476448 YEATS2Q9ULM3 1422 aa23.91■■□□□ 1.42
MCM3-204ENST00000476448 SIGLEC1Q9BZZ2 1709 aa23.9■■□□□ 1.42
MCM3-204ENST00000476448 SAMD9Q5K651 1589 aa23.9■■□□□ 1.42
MCM3-204ENST00000476448 MLECQ14165 292 aa23.89■■□□□ 1.41
MCM3-204ENST00000476448 RICTORQ6R327 1708 aa23.88■■□□□ 1.41
MCM3-204ENST00000476448 PLEKHD1A6NEE1 506 aa23.85■■□□□ 1.41
MCM3-204ENST00000476448 FANCAO15360 1455 aa23.85■■□□□ 1.41
MCM3-204ENST00000476448 POGZQ7Z3K3 1410 aa23.84■■□□□ 1.41
MCM3-204ENST00000476448 DISP3Q9P2K9 1392 aa23.82■■□□□ 1.4
MCM3-204ENST00000476448 RANGAP1P46060 587 aaPredicted RBP23.82■■□□□ 1.4
MCM3-204ENST00000476448 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.81■■□□□ 1.4
MCM3-204ENST00000476448 SOCS7O14512 581 aa23.81■■□□□ 1.4
MCM3-204ENST00000476448 ZMYM4Q5VZL5 1548 aa23.8■■□□□ 1.4
MCM3-204ENST00000476448 ZFYVE16Q7Z3T8 1539 aa23.79■■□□□ 1.4
MCM3-204ENST00000476448 CEBPAP49715 358 aaPredicted RBP23.79■■□□□ 1.4
MCM3-204ENST00000476448 CSRNP3Q8WYN3 585 aa23.78■■□□□ 1.4
MCM3-204ENST00000476448 HECW1Q76N89 1606 aa23.75■■□□□ 1.39
MCM3-204ENST00000476448 MAGI2Q86UL8 1455 aa23.75■■□□□ 1.39
MCM3-204ENST00000476448 EFCAB5A4FU69 1503 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms