RNA–Protein interactions for RNA: ENST00000475315.5

FXR1-211, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-211ENST00000475315 IRX6P78412 446 aaPredicted RBP16.37■□□□□ 0.21
FXR1-211ENST00000475315 CCNB3Q8WWL7 1395 aa16.37■□□□□ 0.21
FXR1-211ENST00000475315 PAK3O75914 559 aaPredicted RBP16.36■□□□□ 0.21
FXR1-211ENST00000475315 PPP4R2Q9NY27 417 aa16.36■□□□□ 0.21
FXR1-211ENST00000475315 NBR1Q14596 966 aa16.34■□□□□ 0.21
FXR1-211ENST00000475315 UBE2Q2Q8WVN8 375 aa16.33■□□□□ 0.2
FXR1-211ENST00000475315 IL27Q8NEV9 243 aa16.29■□□□□ 0.2
FXR1-211ENST00000475315 CCDC136Q96JN2 1154 aa16.29■□□□□ 0.2
FXR1-211ENST00000475315 TIMELESSQ9UNS1 1208 aa16.29■□□□□ 0.2
FXR1-211ENST00000475315 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
FXR1-211ENST00000475315 SIN3AQ96ST3 1273 aa16.27■□□□□ 0.2
FXR1-211ENST00000475315 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.19
FXR1-211ENST00000475315 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.19
FXR1-211ENST00000475315 SETD5Q9C0A6 1442 aa16.26■□□□□ 0.19
FXR1-211ENST00000475315 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
FXR1-211ENST00000475315 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.19
FXR1-211ENST00000475315 WASHC2AQ641Q2 1341 aa16.21■□□□□ 0.18
FXR1-211ENST00000475315 PRXQ9BXM0 1461 aa16.2■□□□□ 0.18
FXR1-211ENST00000475315 IPO9Q96P70 1041 aaKnown RBP16.19■□□□□ 0.18
FXR1-211ENST00000475315 RTL5Q5HYW3 569 aaPredicted RBP16.19■□□□□ 0.18
FXR1-211ENST00000475315 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.16■□□□□ 0.18
FXR1-211ENST00000475315 RTN4Q9NQC3 1192 aaKnown RBP16.16■□□□□ 0.18
FXR1-211ENST00000475315 C11orf95C9JLR9 678 aaPredicted RBP16.13■□□□□ 0.17
FXR1-211ENST00000475315 TOP2BQ02880 1626 aa16.12■□□□□ 0.17
FXR1-211ENST00000475315 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
FXR1-211ENST00000475315 ANP32AP39687 249 aaKnown RBP16.11■□□□□ 0.17
FXR1-211ENST00000475315 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
FXR1-211ENST00000475315 MAP3K1Q13233 1512 aa16.1■□□□□ 0.17
FXR1-211ENST00000475315 WASHC2CQ9Y4E1 1318 aa16.1■□□□□ 0.17
FXR1-211ENST00000475315 ARHGAP35Q9NRY4 1499 aa16.1■□□□□ 0.17
FXR1-211ENST00000475315 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
FXR1-211ENST00000475315 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
FXR1-211ENST00000475315 BIVM-ERCC5R4GMW8 1640 aa16.08■□□□□ 0.16
FXR1-211ENST00000475315 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
FXR1-211ENST00000475315 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
FXR1-211ENST00000475315 USP35Q9P2H5 1018 aa16.03■□□□□ 0.16
FXR1-211ENST00000475315 CCDC184Q52MB2 194 aa16.03■□□□□ 0.16
FXR1-211ENST00000475315 KDM5BQ9UGL1 1544 aa16.03■□□□□ 0.16
FXR1-211ENST00000475315 PHLDB1Q86UU1 1377 aa16.02■□□□□ 0.15
FXR1-211ENST00000475315 NCOA2Q15596 1464 aa16.02■□□□□ 0.15
FXR1-211ENST00000475315 TONSLQ96HA7 1378 aa16■□□□□ 0.15
FXR1-211ENST00000475315 UNC13AQ9UPW8 1703 aa16■□□□□ 0.15
FXR1-211ENST00000475315 LRRC9Q6ZRR7 1453 aa16■□□□□ 0.15
FXR1-211ENST00000475315 RNF123Q5XPI4 1314 aa15.98■□□□□ 0.15
FXR1-211ENST00000475315 CNTLNQ9NXG0 1405 aa15.96■□□□□ 0.15
FXR1-211ENST00000475315 NEFMP07197 916 aa15.95■□□□□ 0.14
FXR1-211ENST00000475315 SMG6Q86US8 1419 aaKnown RBP15.95■□□□□ 0.14
FXR1-211ENST00000475315 CFAP43Q8NDM7 1665 aa15.95■□□□□ 0.14
FXR1-211ENST00000475315 AKNAQ7Z591 1439 aa15.94■□□□□ 0.14
FXR1-211ENST00000475315 BRPF3Q9ULD4 1205 aa15.93■□□□□ 0.14
FXR1-211ENST00000475315 FAM50AQ14320 339 aaKnown RBP15.91■□□□□ 0.14
FXR1-211ENST00000475315 PRKRIP1Q9H875 184 aaPredicted RBP15.91■□□□□ 0.14
FXR1-211ENST00000475315 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■□□□□ 8.8
FXR1-211ENST00000475315 FAM9BQ8IZU0 186 aa15.9■□□□□ 0.14
FXR1-211ENST00000475315 LAS1LQ9Y4W2 734 aaKnown RBP15.9■□□□□ 0.14
FXR1-211ENST00000475315 PPM1GO15355 546 aaPredicted RBP15.88■□□□□ 0.13
FXR1-211ENST00000475315 HSPA5P11021 654 aaKnown RBP15.88■□□□□ 0.13
FXR1-211ENST00000475315 UACAQ9BZF9 1416 aa15.87■□□□□ 0.13
FXR1-211ENST00000475315 MRS2Q9HD23 443 aa15.87■□□□□ 0.13
FXR1-211ENST00000475315 CCDC18Q5T9S5 1454 aa15.86■□□□□ 0.13
FXR1-211ENST00000475315 EIF5BO60841 1220 aaKnown RBP15.85■□□□□ 0.13
FXR1-211ENST00000475315 NUDCQ9Y266 331 aa15.85■□□□□ 0.13
FXR1-211ENST00000475315 GSE1Q14687 1217 aa15.84■□□□□ 0.13
FXR1-211ENST00000475315 KIF27Q86VH2 1401 aa15.84■□□□□ 0.13
FXR1-211ENST00000475315 NCOA1Q15788 1441 aa15.83■□□□□ 0.12
FXR1-211ENST00000475315 POLR1AO95602 1720 aaPredicted RBP15.82■□□□□ 0.12
FXR1-211ENST00000475315 ABCA5Q8WWZ7 1642 aa15.82■□□□□ 0.12
FXR1-211ENST00000475315 PTPN23Q9H3S7 1636 aa15.82■□□□□ 0.12
FXR1-211ENST00000475315 PKNOX2Q96KN3 472 aa15.82■□□□□ 0.12
FXR1-211ENST00000475315 RSPH6AQ9H0K4 717 aa15.81■□□□□ 0.12
FXR1-211ENST00000475315 TCERG1O14776 1098 aaKnown RBP15.8■□□□□ 0.12
FXR1-211ENST00000475315 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
FXR1-211ENST00000475315 CCDC7Q96M83 1385 aa15.8■□□□□ 0.12
FXR1-211ENST00000475315 HFM1A2PYH4 1435 aa15.8■□□□□ 0.12
FXR1-211ENST00000475315 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
FXR1-211ENST00000475315 BACH2Q9BYV9 841 aa15.79■□□□□ 0.12
FXR1-211ENST00000475315 PDE4AP27815 886 aa15.79■□□□□ 0.12
FXR1-211ENST00000475315 CUX1P39880 1505 aa15.78■□□□□ 0.12
FXR1-211ENST00000475315 EIF4G2P78344 907 aaKnown RBP eCLIP15.78■□□□□ 0.12
FXR1-211ENST00000475315 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.122e-8■■■■□ 23.5
FXR1-211ENST00000475315 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
FXR1-211ENST00000475315 FRAT1Q92837 279 aaPredicted RBP15.75■□□□□ 0.11
FXR1-211ENST00000475315 PTPRKQ15262 1439 aa15.75■□□□□ 0.11
FXR1-211ENST00000475315 MS4A1P11836 297 aa15.74■□□□□ 0.11
FXR1-211ENST00000475315 FAM43AQ8N2R8 423 aa15.74■□□□□ 0.11
FXR1-211ENST00000475315 NFKBIBQ15653 356 aa15.73■□□□□ 0.11
FXR1-211ENST00000475315 NAIPQ13075 1403 aa15.73■□□□□ 0.11
FXR1-211ENST00000475315 FGD6Q6ZV73 1430 aa15.72■□□□□ 0.11
FXR1-211ENST00000475315 DENND4BO75064 1496 aaPredicted RBP15.7■□□□□ 0.1
FXR1-211ENST00000475315 BICRAQ9NZM4 1560 aa15.69■□□□□ 0.1
FXR1-211ENST00000475315 DDRGK1Q96HY6 314 aa15.68■□□□□ 0.1
FXR1-211ENST00000475315 HECW1Q76N89 1606 aa15.68■□□□□ 0.1
FXR1-211ENST00000475315 FYCO1Q9BQS8 1478 aa15.66■□□□□ 0.1
FXR1-211ENST00000475315 FMN1Q68DA7 1419 aa15.66■□□□□ 0.1
FXR1-211ENST00000475315 SPATA31E1Q6ZUB1 1445 aa15.66■□□□□ 0.1
FXR1-211ENST00000475315 DHX29Q7Z478 1369 aaKnown RBP15.66■□□□□ 0.1
FXR1-211ENST00000475315 KIF7Q2M1P5 1343 aa15.65■□□□□ 0.1
FXR1-211ENST00000475315 EXOC6Q8TAG9 804 aa15.65■□□□□ 0.1
FXR1-211ENST00000475315 DCAF11Q8TEB1 546 aa15.65■□□□□ 0.1
FXR1-211ENST00000475315 RRP1P56182 461 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms