RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 RUSC2Q8N2Y8 1516 aa27.44■■□□□ 1.98
SRRT-209ENST00000474896 NPM1P06748 294 aaKnown RBP eCLIP27.43■■□□□ 1.98
SRRT-209ENST00000474896 KIF13AQ9H1H9 1805 aa27.39■■□□□ 1.98
SRRT-209ENST00000474896 KIF27Q86VH2 1401 aa27.39■■□□□ 1.97
SRRT-209ENST00000474896 FAM69CQ0P6D2 419 aa27.38■■□□□ 1.97
SRRT-209ENST00000474896 KIAA0586Q9BVV6 1533 aa27.36■■□□□ 1.97
SRRT-209ENST00000474896 ABCC10Q5T3U5 1492 aa27.3■■□□□ 1.96
SRRT-209ENST00000474896 CUL7Q14999 1698 aa27.28■■□□□ 1.96
SRRT-209ENST00000474896 ADCY10Q96PN6 1610 aa27.27■■□□□ 1.96
SRRT-209ENST00000474896 CARMIL1Q5VZK9 1371 aa27.25■■□□□ 1.95
SRRT-209ENST00000474896 MAPKBP1O60336 1514 aa27.25■■□□□ 1.95
SRRT-209ENST00000474896 TTBK1Q5TCY1 1321 aaPredicted RBP27.21■■□□□ 1.95
SRRT-209ENST00000474896 PTPRGP23470 1445 aa27.19■■□□□ 1.94
SRRT-209ENST00000474896 DIP2BQ9P265 1576 aa27.18■■□□□ 1.94
SRRT-209ENST00000474896 CARMIL2Q6F5E8 1435 aa27.11■■□□□ 1.93
SRRT-209ENST00000474896 TNIKQ9UKE5 1360 aa27.1■■□□□ 1.93
SRRT-209ENST00000474896 TSPOAP1O95153 1857 aa27.06■■□□□ 1.92
SRRT-209ENST00000474896 IQGAP2Q13576 1575 aa27.03■■□□□ 1.92
SRRT-209ENST00000474896 ABCC2Q92887 1545 aa27■■□□□ 1.91
SRRT-209ENST00000474896 KDM6BO15054 1643 aa27■■□□□ 1.91
SRRT-209ENST00000474896 ASXL2Q76L83 1435 aa26.96■■□□□ 1.91
SRRT-209ENST00000474896 UACAQ9BZF9 1416 aa26.95■■□□□ 1.9
SRRT-209ENST00000474896 DISP1Q96F81 1524 aa26.95■■□□□ 1.9
SRRT-209ENST00000474896 RAPGEF2Q9Y4G8 1499 aa26.94■■□□□ 1.9
SRRT-209ENST00000474896 UHRF1BP1LA0JNW5 1464 aa26.93■■□□□ 1.9
SRRT-209ENST00000474896 PLB1Q6P1J6 1458 aa26.93■■□□□ 1.9
SRRT-209ENST00000474896 KDM4FA0A1W2PPD8 638 aa26.92■■□□□ 1.9
SRRT-209ENST00000474896 UGGT2Q9NYU1 1516 aa26.86■■□□□ 1.89
SRRT-209ENST00000474896 GLI2P10070 1586 aa26.86■■□□□ 1.89
SRRT-209ENST00000474896 KDM5BQ9UGL1 1544 aa26.81■■□□□ 1.88
SRRT-209ENST00000474896 PPRC1Q5VV67 1664 aaKnown RBP26.79■■□□□ 1.88
SRRT-209ENST00000474896 EPRSP07814 1512 aaKnown RBP26.78■■□□□ 1.88
SRRT-209ENST00000474896 KIAA0556O60303 1618 aa26.78■■□□□ 1.88
SRRT-209ENST00000474896 ZCCHC11Q5TAX3 1644 aaKnown RBP26.74■■□□□ 1.87
SRRT-209ENST00000474896 COL17A1Q9UMD9 1497 aaPredicted RBP26.7■■□□□ 1.87
SRRT-209ENST00000474896 MAP3K4Q9Y6R4 1608 aa26.68■■□□□ 1.86
SRRT-209ENST00000474896 TEX14Q8IWB6 1497 aa26.66■■□□□ 1.86
SRRT-209ENST00000474896 CTTNBP2Q8WZ74 1663 aa26.66■■□□□ 1.86
SRRT-209ENST00000474896 GOLGA3Q08378 1498 aa26.65■■□□□ 1.86
SRRT-209ENST00000474896 KCNH8Q96L42 1107 aa26.64■■□□□ 1.86
SRRT-209ENST00000474896 WDR7Q9Y4E6 1490 aa26.63■■□□□ 1.85
SRRT-209ENST00000474896 PRXQ9BXM0 1461 aa26.61■■□□□ 1.85
SRRT-209ENST00000474896 ADGRL1O94910 1474 aa26.58■■□□□ 1.85
SRRT-209ENST00000474896 ABCA8O94911 1581 aa26.57■■□□□ 1.84
SRRT-209ENST00000474896 CD109Q6YHK3 1445 aa26.55■■□□□ 1.84
SRRT-209ENST00000474896 P3H3Q8IVL6 736 aa26.54■■□□□ 1.84
SRRT-209ENST00000474896 FAM9AQ8IZU1 332 aaPredicted RBP26.53■■□□□ 1.84
SRRT-209ENST00000474896 ARID3CA6NKF2 412 aa26.49■■□□□ 1.83
SRRT-209ENST00000474896 MAGI3Q5TCQ9 1506 aa26.49■■□□□ 1.83
SRRT-209ENST00000474896 CSRNP3Q8WYN3 585 aa26.46■■□□□ 1.83
SRRT-209ENST00000474896 CFAP43Q8NDM7 1665 aa26.46■■□□□ 1.83
SRRT-209ENST00000474896 ATP10BO94823 1461 aa26.41■■□□□ 1.82
SRRT-209ENST00000474896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.32■■□□□ 1.8
SRRT-209ENST00000474896 RANGAP1P46060 587 aaPredicted RBP26.32■■□□□ 1.8
SRRT-209ENST00000474896 HNRNPUL2Q1KMD3 747 aaKnown RBP26.32■■□□□ 1.8
SRRT-209ENST00000474896 ILDR1Q86SU0 546 aaPredicted RBP26.29■■□□□ 1.8
SRRT-209ENST00000474896 ARAP3Q8WWN8 1544 aa26.29■■□□□ 1.8
SRRT-209ENST00000474896 SAMD9Q5K651 1589 aa26.29■■□□□ 1.8
SRRT-209ENST00000474896 HECW2Q9P2P5 1572 aa26.25■■□□□ 1.79
SRRT-209ENST00000474896 RAPGEF6Q8TEU7 1601 aa26.25■■□□□ 1.79
SRRT-209ENST00000474896 PHLDB1Q86UU1 1377 aa26.24■■□□□ 1.79
SRRT-209ENST00000474896 RAPGEF3O95398 923 aa26.23■■□□□ 1.79
SRRT-209ENST00000474896 ABCA9Q8IUA7 1624 aa26.23■■□□□ 1.79
SRRT-209ENST00000474896 KIF21BO75037 1637 aa26.21■■□□□ 1.79
SRRT-209ENST00000474896 EEA1Q15075 1411 aa26.2■■□□□ 1.78
SRRT-209ENST00000474896 FHOD3Q2V2M9 1422 aa26.17■■□□□ 1.78
SRRT-209ENST00000474896 NUP153P49790 1475 aaKnown RBP26.17■■□□□ 1.78
SRRT-209ENST00000474896 PLEKHD1A6NEE1 506 aa26.15■■□□□ 1.78
SRRT-209ENST00000474896 NEO1Q92859 1461 aa26.15■■□□□ 1.78
SRRT-209ENST00000474896 ARID4BQ4LE39 1312 aaPredicted RBP26.07■■□□□ 1.76
SRRT-209ENST00000474896 ADAMTSL3P82987 1691 aa26.03■■□□□ 1.76
SRRT-209ENST00000474896 PTPRMP28827 1452 aa26.02■■□□□ 1.76
SRRT-209ENST00000474896 FRMPD1Q5SYB0 1578 aa26.01■■□□□ 1.75
SRRT-209ENST00000474896 AKNAQ7Z591 1439 aa26■■□□□ 1.75
SRRT-209ENST00000474896 EHMT2Q96KQ7 1210 aa26■■□□□ 1.75
SRRT-209ENST00000474896 DENND4BO75064 1496 aaPredicted RBP25.99■■□□□ 1.75
SRRT-209ENST00000474896 EFCAB5A4FU69 1503 aa25.98■■□□□ 1.75
SRRT-209ENST00000474896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.97■■□□□ 1.75
SRRT-209ENST00000474896 UBTFP17480 764 aaKnown RBP25.96■■□□□ 1.75
SRRT-209ENST00000474896 FANCAO15360 1455 aa25.96■■□□□ 1.75
SRRT-209ENST00000474896 BCORL1Q5H9F3 1711 aa25.94■■□□□ 1.74
SRRT-209ENST00000474896 ATP1B4Q9UN42 357 aaPredicted RBP25.94■■□□□ 1.74
SRRT-209ENST00000474896 RICTORQ6R327 1708 aa25.91■■□□□ 1.74
SRRT-209ENST00000474896 CDK13Q14004 1512 aaKnown RBP25.9■■□□□ 1.74
SRRT-209ENST00000474896 TTC37Q6PGP7 1564 aa25.9■■□□□ 1.74
SRRT-209ENST00000474896 MADDQ8WXG6 1647 aa25.89■■□□□ 1.74
SRRT-209ENST00000474896 CFAP74Q9C0B2 1584 aa25.89■■□□□ 1.73
SRRT-209ENST00000474896 ARHGEF40Q8TER5 1519 aa25.87■■□□□ 1.73
SRRT-209ENST00000474896 PLCH2O75038 1416 aa25.83■■□□□ 1.73
SRRT-209ENST00000474896 PLPPR3Q6T4P5 718 aa25.83■■□□□ 1.73
SRRT-209ENST00000474896 YEATS2Q9ULM3 1422 aa25.82■■□□□ 1.72
SRRT-209ENST00000474896 FMN1Q68DA7 1419 aa25.81■■□□□ 1.72
SRRT-209ENST00000474896 SCAPERQ9BY12 1400 aa25.81■■□□□ 1.72
SRRT-209ENST00000474896 CHIC1Q5VXU3 224 aa25.81■■□□□ 1.72
SRRT-209ENST00000474896 CDK11AQ9UQ88 783 aaPredicted RBP25.81■■□□□ 1.72
SRRT-209ENST00000474896 RIMS1Q86UR5 1692 aaKnown RBP25.8■■□□□ 1.72
SRRT-209ENST00000474896 POGZQ7Z3K3 1410 aa25.8■■□□□ 1.72
SRRT-209ENST00000474896 ZMYM4Q5VZL5 1548 aa25.8■■□□□ 1.72
SRRT-209ENST00000474896 MLECQ14165 292 aa25.8■■□□□ 1.72
SRRT-209ENST00000474896 ZFYVE16Q7Z3T8 1539 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms