RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 MAPKBP1O60336 1514 aa26.75■■□□□ 1.87
PCCB-212ENST00000474833 JPH4Q96JJ6 628 aa26.73■■□□□ 1.87
PCCB-212ENST00000474833 DIP2BQ9P265 1576 aa26.72■■□□□ 1.87
PCCB-212ENST00000474833 ADCY10Q96PN6 1610 aa26.71■■□□□ 1.87
PCCB-212ENST00000474833 SUPT5HO00267 1087 aaKnown RBP26.7■■□□□ 1.86
PCCB-212ENST00000474833 FAM69CQ0P6D2 419 aa26.65■■□□□ 1.86
PCCB-212ENST00000474833 KDM6BO15054 1643 aa26.56■■□□□ 1.84
PCCB-212ENST00000474833 KIAA0586Q9BVV6 1533 aa26.53■■□□□ 1.84
PCCB-212ENST00000474833 KDM4FA0A1W2PPD8 638 aa26.52■■□□□ 1.84
PCCB-212ENST00000474833 NPM1P06748 294 aaKnown RBP eCLIP26.51■■□□□ 1.83
PCCB-212ENST00000474833 TSPOAP1O95153 1857 aa26.46■■□□□ 1.83
PCCB-212ENST00000474833 IGF1RP08069 1367 aa26.45■■□□□ 1.82
PCCB-212ENST00000474833 CUL7Q14999 1698 aa26.44■■□□□ 1.82
PCCB-212ENST00000474833 PPRC1Q5VV67 1664 aaKnown RBP26.36■■□□□ 1.81
PCCB-212ENST00000474833 KIF27Q86VH2 1401 aa26.35■■□□□ 1.81
PCCB-212ENST00000474833 PTPRGP23470 1445 aa26.33■■□□□ 1.81
PCCB-212ENST00000474833 ABCC2Q92887 1545 aa26.33■■□□□ 1.81
PCCB-212ENST00000474833 GLI2P10070 1586 aa26.3■■□□□ 1.8
PCCB-212ENST00000474833 ASXL2Q76L83 1435 aa26.27■■□□□ 1.8
PCCB-212ENST00000474833 TNIKQ9UKE5 1360 aa26.25■■□□□ 1.79
PCCB-212ENST00000474833 UHRF1BP1LA0JNW5 1464 aa26.23■■□□□ 1.79
PCCB-212ENST00000474833 PLB1Q6P1J6 1458 aa26.23■■□□□ 1.79
PCCB-212ENST00000474833 IQGAP2Q13576 1575 aa26.22■■□□□ 1.79
PCCB-212ENST00000474833 ADGRL1O94910 1474 aa26.21■■□□□ 1.79
PCCB-212ENST00000474833 CARMIL1Q5VZK9 1371 aa26.2■■□□□ 1.79
PCCB-212ENST00000474833 COL17A1Q9UMD9 1497 aaPredicted RBP26.2■■□□□ 1.78
PCCB-212ENST00000474833 CARMIL2Q6F5E8 1435 aa26.2■■□□□ 1.78
PCCB-212ENST00000474833 DISP1Q96F81 1524 aa26.19■■□□□ 1.78
PCCB-212ENST00000474833 ILDR1Q86SU0 546 aaPredicted RBP26.18■■□□□ 1.78
PCCB-212ENST00000474833 TTBK1Q5TCY1 1321 aaPredicted RBP26.16■■□□□ 1.78
PCCB-212ENST00000474833 MAP3K4Q9Y6R4 1608 aa26.16■■□□□ 1.78
PCCB-212ENST00000474833 UACAQ9BZF9 1416 aa26.14■■□□□ 1.78
PCCB-212ENST00000474833 EPRSP07814 1512 aaKnown RBP26.14■■□□□ 1.77
PCCB-212ENST00000474833 KDM5BQ9UGL1 1544 aa26.13■■□□□ 1.77
PCCB-212ENST00000474833 ZCCHC11Q5TAX3 1644 aaKnown RBP26.07■■□□□ 1.76
PCCB-212ENST00000474833 UGGT2Q9NYU1 1516 aa26.06■■□□□ 1.76
PCCB-212ENST00000474833 HECW2Q9P2P5 1572 aa26.03■■□□□ 1.76
PCCB-212ENST00000474833 TEX14Q8IWB6 1497 aa26.02■■□□□ 1.76
PCCB-212ENST00000474833 KIAA0556O60303 1618 aa26.02■■□□□ 1.76
PCCB-212ENST00000474833 WDR7Q9Y4E6 1490 aa25.94■■□□□ 1.74
PCCB-212ENST00000474833 RAPGEF2Q9Y4G8 1499 aa25.93■■□□□ 1.74
PCCB-212ENST00000474833 MAGI3Q5TCQ9 1506 aa25.85■■□□□ 1.73
PCCB-212ENST00000474833 CFAP43Q8NDM7 1665 aa25.83■■□□□ 1.73
PCCB-212ENST00000474833 ABCA8O94911 1581 aa25.82■■□□□ 1.72
PCCB-212ENST00000474833 CTTNBP2Q8WZ74 1663 aa25.8■■□□□ 1.72
PCCB-212ENST00000474833 CD109Q6YHK3 1445 aa25.78■■□□□ 1.72
PCCB-212ENST00000474833 KIF21BO75037 1637 aa25.76■■□□□ 1.71
PCCB-212ENST00000474833 GOLGA3Q08378 1498 aa25.71■■□□□ 1.71
PCCB-212ENST00000474833 ARAP3Q8WWN8 1544 aa25.68■■□□□ 1.7
PCCB-212ENST00000474833 KCNH8Q96L42 1107 aa25.66■■□□□ 1.7
PCCB-212ENST00000474833 PRXQ9BXM0 1461 aa25.61■■□□□ 1.69
PCCB-212ENST00000474833 ADAMTSL3P82987 1691 aa25.59■■□□□ 1.69
PCCB-212ENST00000474833 ABCA9Q8IUA7 1624 aa25.58■■□□□ 1.69
PCCB-212ENST00000474833 ATP10BO94823 1461 aa25.56■■□□□ 1.68
PCCB-212ENST00000474833 PTPRMP28827 1452 aa25.55■■□□□ 1.68
PCCB-212ENST00000474833 FRMPD1Q5SYB0 1578 aa25.52■■□□□ 1.68
PCCB-212ENST00000474833 FBXO41Q8TF61 875 aa25.49■■□□□ 1.67
PCCB-212ENST00000474833 ARID3CA6NKF2 412 aa25.48■■□□□ 1.67
PCCB-212ENST00000474833 PHLDB1Q86UU1 1377 aa25.47■■□□□ 1.67
PCCB-212ENST00000474833 BCORL1Q5H9F3 1711 aa25.46■■□□□ 1.67
PCCB-212ENST00000474833 SAMD9Q5K651 1589 aa25.46■■□□□ 1.67
PCCB-212ENST00000474833 NEO1Q92859 1461 aa25.45■■□□□ 1.66
PCCB-212ENST00000474833 MADDQ8WXG6 1647 aa25.45■■□□□ 1.66
PCCB-212ENST00000474833 RAPGEF3O95398 923 aa25.43■■□□□ 1.66
PCCB-212ENST00000474833 PCF11O94913 1555 aaKnown RBP25.42■■□□□ 1.66
PCCB-212ENST00000474833 LMTK3Q96Q04 1460 aa25.41■■□□□ 1.66
PCCB-212ENST00000474833 RAPGEF6Q8TEU7 1601 aa25.4■■□□□ 1.66
PCCB-212ENST00000474833 P3H3Q8IVL6 736 aa25.38■■□□□ 1.65
PCCB-212ENST00000474833 ARHGEF40Q8TER5 1519 aa25.37■■□□□ 1.65
PCCB-212ENST00000474833 NUP153P49790 1475 aaKnown RBP25.35■■□□□ 1.65
PCCB-212ENST00000474833 RICTORQ6R327 1708 aa25.32■■□□□ 1.64
PCCB-212ENST00000474833 RIMS1Q86UR5 1692 aaKnown RBP25.3■■□□□ 1.64
PCCB-212ENST00000474833 SIGLEC1Q9BZZ2 1709 aa25.28■■□□□ 1.64
PCCB-212ENST00000474833 FHOD3Q2V2M9 1422 aa25.25■■□□□ 1.63
PCCB-212ENST00000474833 ZMYM4Q5VZL5 1548 aa25.23■■□□□ 1.63
PCCB-212ENST00000474833 DENND4BO75064 1496 aaPredicted RBP25.23■■□□□ 1.63
PCCB-212ENST00000474833 ARID4BQ4LE39 1312 aaPredicted RBP25.23■■□□□ 1.63
PCCB-212ENST00000474833 FAM9AQ8IZU1 332 aaPredicted RBP25.22■■□□□ 1.63
PCCB-212ENST00000474833 TTC37Q6PGP7 1564 aa25.2■■□□□ 1.62
PCCB-212ENST00000474833 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.2■■□□□ 1.623e-8■■■□□ 16.7
PCCB-212ENST00000474833 AKNAQ7Z591 1439 aa25.2■■□□□ 1.62
PCCB-212ENST00000474833 CFAP74Q9C0B2 1584 aa25.19■■□□□ 1.62
PCCB-212ENST00000474833 FANCAO15360 1455 aa25.19■■□□□ 1.62
PCCB-212ENST00000474833 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.17■■□□□ 1.62
PCCB-212ENST00000474833 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
PCCB-212ENST00000474833 YEATS2Q9ULM3 1422 aa25.16■■□□□ 1.62
PCCB-212ENST00000474833 HSPA2P54652 639 aa25.15■■□□□ 1.62
PCCB-212ENST00000474833 ZFYVE16Q7Z3T8 1539 aa25.15■■□□□ 1.62
PCCB-212ENST00000474833 CSRNP3Q8WYN3 585 aa25.14■■□□□ 1.62
PCCB-212ENST00000474833 EFCAB5A4FU69 1503 aa25.12■■□□□ 1.61
PCCB-212ENST00000474833 HECW1Q76N89 1606 aa25.09■■□□□ 1.61
PCCB-212ENST00000474833 POGZQ7Z3K3 1410 aa25.09■■□□□ 1.61
PCCB-212ENST00000474833 MAGI2Q86UL8 1455 aa25.09■■□□□ 1.61
PCCB-212ENST00000474833 FER1L4A9Z1Z3 1794 aa25.08■■□□□ 1.6
PCCB-212ENST00000474833 PLEKHD1A6NEE1 506 aa25.07■■□□□ 1.6
PCCB-212ENST00000474833 CDK13Q14004 1512 aaKnown RBP25.04■■□□□ 1.6
PCCB-212ENST00000474833 ARHGEF12Q9NZN5 1544 aa25.03■■□□□ 1.6
PCCB-212ENST00000474833 RANGAP1P46060 587 aaPredicted RBP25.02■■□□□ 1.6
PCCB-212ENST00000474833 PLPPR3Q6T4P5 718 aa25■■□□□ 1.59
PCCB-212ENST00000474833 CERKQ8TCT0 537 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms