RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 CUL7Q14999 1698 aa24.8■■□□□ 1.56
CCDC78-209ENST00000474647 JPH4Q96JJ6 628 aa24.79■■□□□ 1.56
CCDC78-209ENST00000474647 ADCY10Q96PN6 1610 aa24.75■■□□□ 1.55
CCDC78-209ENST00000474647 TSPOAP1O95153 1857 aa24.71■■□□□ 1.55
CCDC78-209ENST00000474647 DIP2BQ9P265 1576 aa24.69■■□□□ 1.54
CCDC78-209ENST00000474647 MAPKBP1O60336 1514 aa24.69■■□□□ 1.54
CCDC78-209ENST00000474647 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
CCDC78-209ENST00000474647 KIAA0586Q9BVV6 1533 aa24.66■■□□□ 1.54
CCDC78-209ENST00000474647 ABCC10Q5T3U5 1492 aa24.65■■□□□ 1.54
CCDC78-209ENST00000474647 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
CCDC78-209ENST00000474647 FAM69CQ0P6D2 419 aa24.61■■□□□ 1.53
CCDC78-209ENST00000474647 IGF1RP08069 1367 aa24.61■■□□□ 1.53
CCDC78-209ENST00000474647 KDM6BO15054 1643 aa24.57■■□□□ 1.52
CCDC78-209ENST00000474647 IQGAP2Q13576 1575 aa24.51■■□□□ 1.51
CCDC78-209ENST00000474647 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
CCDC78-209ENST00000474647 CARMIL1Q5VZK9 1371 aa24.48■■□□□ 1.51
CCDC78-209ENST00000474647 PTPRGP23470 1445 aa24.45■■□□□ 1.51
CCDC78-209ENST00000474647 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
CCDC78-209ENST00000474647 ABCC2Q92887 1545 aa24.4■■□□□ 1.5
CCDC78-209ENST00000474647 TNIKQ9UKE5 1360 aa24.4■■□□□ 1.5
CCDC78-209ENST00000474647 PPRC1Q5VV67 1664 aaKnown RBP24.4■■□□□ 1.5
CCDC78-209ENST00000474647 CTTNBP2Q8WZ74 1663 aa24.35■■□□□ 1.49
CCDC78-209ENST00000474647 ASXL2Q76L83 1435 aa24.33■■□□□ 1.49
CCDC78-209ENST00000474647 DISP1Q96F81 1524 aa24.32■■□□□ 1.48
CCDC78-209ENST00000474647 ZCCHC11Q5TAX3 1644 aaKnown RBP24.32■■□□□ 1.48
CCDC78-209ENST00000474647 GLI2P10070 1586 aa24.31■■□□□ 1.48
CCDC78-209ENST00000474647 KIAA0556O60303 1618 aa24.3■■□□□ 1.48
CCDC78-209ENST00000474647 UHRF1BP1LA0JNW5 1464 aa24.3■■□□□ 1.48
CCDC78-209ENST00000474647 PLB1Q6P1J6 1458 aa24.3■■□□□ 1.48
CCDC78-209ENST00000474647 RAPGEF2Q9Y4G8 1499 aa24.29■■□□□ 1.48
CCDC78-209ENST00000474647 UACAQ9BZF9 1416 aa24.27■■□□□ 1.48
CCDC78-209ENST00000474647 UGGT2Q9NYU1 1516 aa24.27■■□□□ 1.48
CCDC78-209ENST00000474647 MAP3K4Q9Y6R4 1608 aa24.27■■□□□ 1.48
CCDC78-209ENST00000474647 KDM5BQ9UGL1 1544 aa24.21■■□□□ 1.47
CCDC78-209ENST00000474647 KDM4FA0A1W2PPD8 638 aa24.21■■□□□ 1.47
CCDC78-209ENST00000474647 EPRSP07814 1512 aaKnown RBP24.19■■□□□ 1.46
CCDC78-209ENST00000474647 TEX14Q8IWB6 1497 aa24.13■■□□□ 1.45
CCDC78-209ENST00000474647 ADGRL1O94910 1474 aa24.09■■□□□ 1.45
CCDC78-209ENST00000474647 CFAP43Q8NDM7 1665 aa24.08■■□□□ 1.45
CCDC78-209ENST00000474647 WDR7Q9Y4E6 1490 aa24.08■■□□□ 1.45
CCDC78-209ENST00000474647 COL17A1Q9UMD9 1497 aaPredicted RBP24.07■■□□□ 1.44
CCDC78-209ENST00000474647 GOLGA3Q08378 1498 aa24.06■■□□□ 1.44
CCDC78-209ENST00000474647 ABCA8O94911 1581 aa24.03■■□□□ 1.44
CCDC78-209ENST00000474647 PRXQ9BXM0 1461 aa23.94■■□□□ 1.42
CCDC78-209ENST00000474647 CD109Q6YHK3 1445 aa23.92■■□□□ 1.42
CCDC78-209ENST00000474647 MAGI3Q5TCQ9 1506 aa23.91■■□□□ 1.42
CCDC78-209ENST00000474647 KCNH8Q96L42 1107 aa23.91■■□□□ 1.42
CCDC78-209ENST00000474647 KIF21BO75037 1637 aa23.91■■□□□ 1.42
CCDC78-209ENST00000474647 HECW2Q9P2P5 1572 aa23.88■■□□□ 1.41
CCDC78-209ENST00000474647 ARID3CA6NKF2 412 aa23.84■■□□□ 1.41
CCDC78-209ENST00000474647 SAMD9Q5K651 1589 aa23.83■■□□□ 1.41
CCDC78-209ENST00000474647 RAPGEF6Q8TEU7 1601 aa23.82■■□□□ 1.4
CCDC78-209ENST00000474647 P3H3Q8IVL6 736 aa23.82■■□□□ 1.4
CCDC78-209ENST00000474647 ABCA9Q8IUA7 1624 aa23.81■■□□□ 1.4
CCDC78-209ENST00000474647 FAM9AQ8IZU1 332 aaPredicted RBP23.79■■□□□ 1.4
CCDC78-209ENST00000474647 ATP10BO94823 1461 aa23.77■■□□□ 1.4
CCDC78-209ENST00000474647 ARAP3Q8WWN8 1544 aa23.74■■□□□ 1.39
CCDC78-209ENST00000474647 ILDR1Q86SU0 546 aaPredicted RBP23.71■■□□□ 1.39
CCDC78-209ENST00000474647 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.66■■□□□ 1.38
CCDC78-209ENST00000474647 HNRNPUL2Q1KMD3 747 aaKnown RBP23.66■■□□□ 1.38
CCDC78-209ENST00000474647 CSRNP3Q8WYN3 585 aa23.66■■□□□ 1.38
CCDC78-209ENST00000474647 RANGAP1P46060 587 aaPredicted RBP23.65■■□□□ 1.38
CCDC78-209ENST00000474647 FRMPD1Q5SYB0 1578 aa23.64■■□□□ 1.37
CCDC78-209ENST00000474647 ADAMTSL3P82987 1691 aa23.64■■□□□ 1.37
CCDC78-209ENST00000474647 NUP153P49790 1475 aaKnown RBP23.62■■□□□ 1.37
CCDC78-209ENST00000474647 FHOD3Q2V2M9 1422 aa23.61■■□□□ 1.37
CCDC78-209ENST00000474647 BCORL1Q5H9F3 1711 aa23.61■■□□□ 1.37
CCDC78-209ENST00000474647 NEO1Q92859 1461 aa23.61■■□□□ 1.37
CCDC78-209ENST00000474647 PHLDB1Q86UU1 1377 aa23.59■■□□□ 1.37
CCDC78-209ENST00000474647 RICTORQ6R327 1708 aa23.59■■□□□ 1.37
CCDC78-209ENST00000474647 EEA1Q15075 1411 aa23.59■■□□□ 1.37
CCDC78-209ENST00000474647 CFAP74Q9C0B2 1584 aa23.57■■□□□ 1.36
CCDC78-209ENST00000474647 MADDQ8WXG6 1647 aa23.56■■□□□ 1.36
CCDC78-209ENST00000474647 RAPGEF3O95398 923 aa23.56■■□□□ 1.36
CCDC78-209ENST00000474647 RIMS1Q86UR5 1692 aaKnown RBP23.53■■□□□ 1.36
CCDC78-209ENST00000474647 EFCAB5A4FU69 1503 aa23.53■■□□□ 1.36
CCDC78-209ENST00000474647 ARHGEF40Q8TER5 1519 aa23.53■■□□□ 1.36
CCDC78-209ENST00000474647 TTC37Q6PGP7 1564 aa23.52■■□□□ 1.36
CCDC78-209ENST00000474647 PTPRMP28827 1452 aa23.52■■□□□ 1.36
CCDC78-209ENST00000474647 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.49■■□□□ 1.35
CCDC78-209ENST00000474647 ARID4BQ4LE39 1312 aaPredicted RBP23.47■■□□□ 1.35
CCDC78-209ENST00000474647 FANCAO15360 1455 aa23.46■■□□□ 1.35
CCDC78-209ENST00000474647 CDK13Q14004 1512 aaKnown RBP23.44■■□□□ 1.34
CCDC78-209ENST00000474647 DENND4BO75064 1496 aaPredicted RBP23.44■■□□□ 1.34
CCDC78-209ENST00000474647 PLEKHD1A6NEE1 506 aa23.44■■□□□ 1.34
CCDC78-209ENST00000474647 SIGLEC1Q9BZZ2 1709 aa23.43■■□□□ 1.34
CCDC78-209ENST00000474647 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
CCDC78-209ENST00000474647 MYO5CQ9NQX4 1742 aa23.42■■□□□ 1.34
CCDC78-209ENST00000474647 PCF11O94913 1555 aaKnown RBP23.4■■□□□ 1.34
CCDC78-209ENST00000474647 FER1L4A9Z1Z3 1794 aa23.4■■□□□ 1.34
CCDC78-209ENST00000474647 ZMYM4Q5VZL5 1548 aa23.4■■□□□ 1.34
CCDC78-209ENST00000474647 ZFYVE16Q7Z3T8 1539 aa23.38■■□□□ 1.33
CCDC78-209ENST00000474647 HECW1Q76N89 1606 aa23.38■■□□□ 1.33
CCDC78-209ENST00000474647 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
CCDC78-209ENST00000474647 LRRIQ1Q96JM4 1722 aa23.33■■□□□ 1.33
CCDC78-209ENST00000474647 LMTK3Q96Q04 1460 aa23.33■■□□□ 1.33
CCDC78-209ENST00000474647 YEATS2Q9ULM3 1422 aa23.31■■□□□ 1.32
CCDC78-209ENST00000474647 KIF14Q15058 1648 aa23.3■■□□□ 1.32
CCDC78-209ENST00000474647 POGZQ7Z3K3 1410 aa23.3■■□□□ 1.32
CCDC78-209ENST00000474647 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms