RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 TOP2BQ02880 1626 aa15.66■□□□□ 0.1
TNFRSF9-202ENST00000474475 WRNQ14191 1432 aaPredicted RBP eCLIP15.64■□□□□ 0.09
TNFRSF9-202ENST00000474475 ADAMTS12P58397 1594 aa15.56■□□□□ 0.08
TNFRSF9-202ENST00000474475 GRIN2AQ12879 1464 aa15.54■□□□□ 0.08
TNFRSF9-202ENST00000474475 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
TNFRSF9-202ENST00000474475 CEP170Q5SW79 1584 aa15.5■□□□□ 0.07
TNFRSF9-202ENST00000474475 ERICH3Q5RHP9 1530 aa15.5■□□□□ 0.07
TNFRSF9-202ENST00000474475 FHAD1B1AJZ9 1412 aa15.5■□□□□ 0.07
TNFRSF9-202ENST00000474475 NUP160Q12769 1436 aa15.49■□□□□ 0.07
TNFRSF9-202ENST00000474475 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
TNFRSF9-202ENST00000474475 ERCC6L2Q5T890 1561 aa15.46■□□□□ 0.07
TNFRSF9-202ENST00000474475 TRHP20396 242 aaPredicted RBP15.45■□□□□ 0.06
TNFRSF9-202ENST00000474475 SHROOM2Q13796 1616 aa15.43■□□□□ 0.06
TNFRSF9-202ENST00000474475 RUSC2Q8N2Y8 1516 aa15.34■□□□□ 0.05
TNFRSF9-202ENST00000474475 NPM3O75607 178 aaKnown RBP15.34■□□□□ 0.05
TNFRSF9-202ENST00000474475 IGF1RP08069 1367 aa15.33■□□□□ 0.04
TNFRSF9-202ENST00000474475 KIF27Q86VH2 1401 aa15.33■□□□□ 0.04
TNFRSF9-202ENST00000474475 PRG4Q92954 1404 aaPredicted RBP15.33■□□□□ 0.04
TNFRSF9-202ENST00000474475 JPH4Q96JJ6 628 aa15.31■□□□□ 0.04
TNFRSF9-202ENST00000474475 CUL7Q14999 1698 aa15.3■□□□□ 0.04
TNFRSF9-202ENST00000474475 DMRT2Q9Y5R5 561 aa15.3■□□□□ 0.04
TNFRSF9-202ENST00000474475 KIAA0586Q9BVV6 1533 aa15.25■□□□□ 0.03
TNFRSF9-202ENST00000474475 CARMIL1Q5VZK9 1371 aa15.22■□□□□ 0.03
TNFRSF9-202ENST00000474475 RNF216Q9NWF9 866 aaPredicted RBP15.17■□□□□ 0.02
TNFRSF9-202ENST00000474475 KIF13AQ9H1H9 1805 aa15.16■□□□□ 0.02
TNFRSF9-202ENST00000474475 ADCY10Q96PN6 1610 aa15.16■□□□□ 0.02
TNFRSF9-202ENST00000474475 IQGAP2Q13576 1575 aa15.12■□□□□ 0.01
TNFRSF9-202ENST00000474475 MAPKBP1O60336 1514 aa15.12■□□□□ 0.01
TNFRSF9-202ENST00000474475 NPM1P06748 294 aaKnown RBP eCLIP15.1■□□□□ 0.01
TNFRSF9-202ENST00000474475 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
TNFRSF9-202ENST00000474475 PTPRGP23470 1445 aa15.09■□□□□ 0.01
TNFRSF9-202ENST00000474475 ABCC10Q5T3U5 1492 aa15.08■□□□□ 0.01
TNFRSF9-202ENST00000474475 CARMIL2Q6F5E8 1435 aa15.08■□□□□ 0
TNFRSF9-202ENST00000474475 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
TNFRSF9-202ENST00000474475 DIP2BQ9P265 1576 aa15.07■□□□□ 0
TNFRSF9-202ENST00000474475 TNIKQ9UKE5 1360 aa15.06■□□□□ 0
TNFRSF9-202ENST00000474475 DISP1Q96F81 1524 aa15.06■□□□□ 0
TNFRSF9-202ENST00000474475 FAM69CQ0P6D2 419 aa15.05■□□□□ -0
TNFRSF9-202ENST00000474475 TTBK1Q5TCY1 1321 aaPredicted RBP15.05■□□□□ -0
TNFRSF9-202ENST00000474475 UGGT2Q9NYU1 1516 aa15.03■□□□□ -0
TNFRSF9-202ENST00000474475 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
TNFRSF9-202ENST00000474475 ABCC2Q92887 1545 aa15.01□□□□□ -0.01
TNFRSF9-202ENST00000474475 KIAA0556O60303 1618 aa14.99□□□□□ -0.01
TNFRSF9-202ENST00000474475 UHRF1BP1LA0JNW5 1464 aa14.99□□□□□ -0.01
TNFRSF9-202ENST00000474475 CTTNBP2Q8WZ74 1663 aa14.99□□□□□ -0.01
TNFRSF9-202ENST00000474475 UACAQ9BZF9 1416 aa14.98□□□□□ -0.01
TNFRSF9-202ENST00000474475 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
TNFRSF9-202ENST00000474475 TSPOAP1O95153 1857 aa14.95□□□□□ -0.02
TNFRSF9-202ENST00000474475 ASXL2Q76L83 1435 aa14.94□□□□□ -0.02
TNFRSF9-202ENST00000474475 KDM5BQ9UGL1 1544 aa14.92□□□□□ -0.02
TNFRSF9-202ENST00000474475 PLB1Q6P1J6 1458 aa14.92□□□□□ -0.02
TNFRSF9-202ENST00000474475 GLI2P10070 1586 aa14.91□□□□□ -0.02
TNFRSF9-202ENST00000474475 KDM6BO15054 1643 aa14.91□□□□□ -0.02
TNFRSF9-202ENST00000474475 ZCCHC11Q5TAX3 1644 aaKnown RBP14.91□□□□□ -0.02
TNFRSF9-202ENST00000474475 GOLGA3Q08378 1498 aa14.89□□□□□ -0.03
TNFRSF9-202ENST00000474475 PPRC1Q5VV67 1664 aaKnown RBP14.88□□□□□ -0.03
TNFRSF9-202ENST00000474475 EPRSP07814 1512 aaKnown RBP14.86□□□□□ -0.03
TNFRSF9-202ENST00000474475 ABCA8O94911 1581 aa14.85□□□□□ -0.03
TNFRSF9-202ENST00000474475 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
TNFRSF9-202ENST00000474475 MAP3K4Q9Y6R4 1608 aa14.84□□□□□ -0.03
TNFRSF9-202ENST00000474475 WDR7Q9Y4E6 1490 aa14.81□□□□□ -0.04
TNFRSF9-202ENST00000474475 EHMT2Q96KQ7 1210 aa14.8□□□□□ -0.04
TNFRSF9-202ENST00000474475 EEA1Q15075 1411 aa14.79□□□□□ -0.04
TNFRSF9-202ENST00000474475 SAMD9Q5K651 1589 aa14.78□□□□□ -0.04
TNFRSF9-202ENST00000474475 P3H3Q8IVL6 736 aa14.78□□□□□ -0.04
TNFRSF9-202ENST00000474475 COL17A1Q9UMD9 1497 aaPredicted RBP14.77□□□□□ -0.04
TNFRSF9-202ENST00000474475 TEX14Q8IWB6 1497 aa14.76□□□□□ -0.05
TNFRSF9-202ENST00000474475 FAM9AQ8IZU1 332 aaPredicted RBP14.74□□□□□ -0.05
TNFRSF9-202ENST00000474475 CFAP43Q8NDM7 1665 aa14.73□□□□□ -0.05
TNFRSF9-202ENST00000474475 ATP10BO94823 1461 aa14.72□□□□□ -0.05
TNFRSF9-202ENST00000474475 KDM4FA0A1W2PPD8 638 aa14.72□□□□□ -0.05
TNFRSF9-202ENST00000474475 ARID3CA6NKF2 412 aa14.72□□□□□ -0.05
TNFRSF9-202ENST00000474475 KCNH8Q96L42 1107 aa14.72□□□□□ -0.05
TNFRSF9-202ENST00000474475 MAGI3Q5TCQ9 1506 aa14.71□□□□□ -0.06
TNFRSF9-202ENST00000474475 KIF21BO75037 1637 aa14.7□□□□□ -0.06
TNFRSF9-202ENST00000474475 CD109Q6YHK3 1445 aa14.7□□□□□ -0.06
TNFRSF9-202ENST00000474475 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
TNFRSF9-202ENST00000474475 RAPGEF6Q8TEU7 1601 aa14.7□□□□□ -0.06
TNFRSF9-202ENST00000474475 RANGAP1P46060 587 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF9-202ENST00000474475 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
TNFRSF9-202ENST00000474475 NUP153P49790 1475 aaKnown RBP14.65□□□□□ -0.06
TNFRSF9-202ENST00000474475 ILDR1Q86SU0 546 aaPredicted RBP14.64□□□□□ -0.07
TNFRSF9-202ENST00000474475 ADGRL1O94910 1474 aa14.63□□□□□ -0.07
TNFRSF9-202ENST00000474475 ABCA9Q8IUA7 1624 aa14.63□□□□□ -0.07
TNFRSF9-202ENST00000474475 EFCAB5A4FU69 1503 aa14.63□□□□□ -0.07
TNFRSF9-202ENST00000474475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.6□□□□□ -0.07
TNFRSF9-202ENST00000474475 HNRNPUL2Q1KMD3 747 aaKnown RBP14.6□□□□□ -0.07
TNFRSF9-202ENST00000474475 ARAP3Q8WWN8 1544 aa14.59□□□□□ -0.07
TNFRSF9-202ENST00000474475 UBTFP17480 764 aaKnown RBP14.55□□□□□ -0.08
TNFRSF9-202ENST00000474475 NEO1Q92859 1461 aa14.53□□□□□ -0.08
TNFRSF9-202ENST00000474475 PHLDB1Q86UU1 1377 aa14.53□□□□□ -0.08
TNFRSF9-202ENST00000474475 PLEKHD1A6NEE1 506 aa14.53□□□□□ -0.08
TNFRSF9-202ENST00000474475 ARHGAP35Q9NRY4 1499 aa14.52□□□□□ -0.08
TNFRSF9-202ENST00000474475 CDK13Q14004 1512 aaKnown RBP14.51□□□□□ -0.09
TNFRSF9-202ENST00000474475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.51□□□□□ -0.09
TNFRSF9-202ENST00000474475 RAPGEF3O95398 923 aa14.5□□□□□ -0.09
TNFRSF9-202ENST00000474475 FRMPD1Q5SYB0 1578 aa14.5□□□□□ -0.09
TNFRSF9-202ENST00000474475 TTC37Q6PGP7 1564 aa14.49□□□□□ -0.09
TNFRSF9-202ENST00000474475 FOXD4L1Q9NU39 408 aa14.49□□□□□ -0.09
TNFRSF9-202ENST00000474475 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms