RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ADAMTS12P58397 1594 aa27.99■■■□□ 2.07
VARS2-206ENST00000473916 GRIN2BQ13224 1484 aa27.98■■■□□ 2.07
VARS2-206ENST00000473916 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
VARS2-206ENST00000473916 P3H3Q8IVL6 736 aa27.89■■■□□ 2.05
VARS2-206ENST00000473916 SNAPC4Q5SXM2 1469 aa27.86■■■□□ 2.05
VARS2-206ENST00000473916 APLP2Q06481 763 aa27.85■■■□□ 2.05
VARS2-206ENST00000473916 FHOD3Q2V2M9 1422 aa27.84■■■□□ 2.05
VARS2-206ENST00000473916 HRCP23327 699 aa27.83■■■□□ 2.05
VARS2-206ENST00000473916 EFCAB5A4FU69 1503 aa27.81■■■□□ 2.04
VARS2-206ENST00000473916 KANK4Q5T7N3 995 aaPredicted RBP27.76■■■□□ 2.03
VARS2-206ENST00000473916 PCF11O94913 1555 aaKnown RBP27.75■■■□□ 2.03
VARS2-206ENST00000473916 SAMD9Q5K651 1589 aa27.75■■■□□ 2.03
VARS2-206ENST00000473916 IQGAP2Q13576 1575 aa27.7■■■□□ 2.03
VARS2-206ENST00000473916 MAGI1Q96QZ7 1491 aaPredicted RBP27.69■■■□□ 2.02
VARS2-206ENST00000473916 GRIN2AQ12879 1464 aa27.69■■■□□ 2.02
VARS2-206ENST00000473916 TIAM1Q13009 1591 aa27.65■■■□□ 2.02
VARS2-206ENST00000473916 SYNJ2O15056 1496 aa27.62■■■□□ 2.01
VARS2-206ENST00000473916 CFAP43Q8NDM7 1665 aa27.59■■■□□ 2.01
VARS2-206ENST00000473916 ATP1B4Q9UN42 357 aaPredicted RBP27.58■■■□□ 2.01
VARS2-206ENST00000473916 FYCO1Q9BQS8 1478 aa27.58■■■□□ 2.01
VARS2-206ENST00000473916 CEP170Q5SW79 1584 aa27.57■■■□□ 2
VARS2-206ENST00000473916 FBLN2P98095 1184 aa27.57■■■□□ 2
VARS2-206ENST00000473916 CASKIN1Q8WXD9 1431 aa27.57■■■□□ 2
VARS2-206ENST00000473916 CHMP7Q8WUX9 453 aaPredicted RBP27.57■■■□□ 2
VARS2-206ENST00000473916 FMN1Q68DA7 1419 aa27.56■■■□□ 2
VARS2-206ENST00000473916 MAP3K1Q13233 1512 aa27.56■■■□□ 2
VARS2-206ENST00000473916 KIAA0586Q9BVV6 1533 aa27.55■■■□□ 2
VARS2-206ENST00000473916 LRRIQ1Q96JM4 1722 aa27.54■■■□□ 2
VARS2-206ENST00000473916 UGGT2Q9NYU1 1516 aa27.53■■■□□ 2
VARS2-206ENST00000473916 LRRC9Q6ZRR7 1453 aa27.5■■□□□ 1.99
VARS2-206ENST00000473916 HNRNPUL2Q1KMD3 747 aaKnown RBP27.45■■□□□ 1.99
VARS2-206ENST00000473916 DISP1Q96F81 1524 aa27.45■■□□□ 1.98
VARS2-206ENST00000473916 NUP160Q12769 1436 aa27.44■■□□□ 1.98
VARS2-206ENST00000473916 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.44■■□□□ 1.98
VARS2-206ENST00000473916 KIAA0556O60303 1618 aa27.44■■□□□ 1.98
VARS2-206ENST00000473916 CHD1O14646 1710 aa27.4■■□□□ 1.98
VARS2-206ENST00000473916 RRBP1Q9P2E9 1410 aaKnown RBP27.38■■□□□ 1.97
VARS2-206ENST00000473916 PHLDB1Q86UU1 1377 aa27.34■■□□□ 1.97
VARS2-206ENST00000473916 HECW1Q76N89 1606 aa27.3■■□□□ 1.96
VARS2-206ENST00000473916 CCNB3Q8WWL7 1395 aa27.29■■□□□ 1.96
VARS2-206ENST00000473916 CCER1Q8TC90 406 aaPredicted RBP27.26■■□□□ 1.95
VARS2-206ENST00000473916 JPH4Q96JJ6 628 aa27.26■■□□□ 1.95
VARS2-206ENST00000473916 MAGI3Q5TCQ9 1506 aa27.26■■□□□ 1.95
VARS2-206ENST00000473916 CDK13Q14004 1512 aaKnown RBP27.25■■□□□ 1.95
VARS2-206ENST00000473916 ARID3CA6NKF2 412 aa27.24■■□□□ 1.95
VARS2-206ENST00000473916 EPRSP07814 1512 aaKnown RBP27.23■■□□□ 1.95
VARS2-206ENST00000473916 MTUS2Q5JR59 1369 aa27.23■■□□□ 1.95
VARS2-206ENST00000473916 CCDC18Q5T9S5 1454 aa27.21■■□□□ 1.95
VARS2-206ENST00000473916 RAPGEF6Q8TEU7 1601 aa27.2■■□□□ 1.94
VARS2-206ENST00000473916 ZEB1P37275 1124 aaPredicted RBP27.19■■□□□ 1.94
VARS2-206ENST00000473916 EHBP1L1Q8N3D4 1523 aa27.17■■□□□ 1.94
VARS2-206ENST00000473916 CARMIL2Q6F5E8 1435 aa27.16■■□□□ 1.94
VARS2-206ENST00000473916 NUP153P49790 1475 aaKnown RBP27.16■■□□□ 1.94
VARS2-206ENST00000473916 ITGAEP38570 1179 aa27.16■■□□□ 1.94
VARS2-206ENST00000473916 PLB1Q6P1J6 1458 aa27.14■■□□□ 1.94
VARS2-206ENST00000473916 SUPT6HQ7KZ85 1726 aaKnown RBP27.14■■□□□ 1.94
VARS2-206ENST00000473916 NCOA2Q15596 1464 aa27.13■■□□□ 1.93
VARS2-206ENST00000473916 PRG4Q92954 1404 aaPredicted RBP27.1■■□□□ 1.93
VARS2-206ENST00000473916 FAM50AQ14320 339 aaKnown RBP27.09■■□□□ 1.93
VARS2-206ENST00000473916 FGD6Q6ZV73 1430 aa27.06■■□□□ 1.92
VARS2-206ENST00000473916 SHROOM2Q13796 1616 aa27.06■■□□□ 1.92
VARS2-206ENST00000473916 ARHGEF11O15085 1522 aa27.05■■□□□ 1.92
VARS2-206ENST00000473916 ERCC6L2Q5T890 1561 aa27.01■■□□□ 1.91
VARS2-206ENST00000473916 MYOM3Q5VTT5 1437 aa27.01■■□□□ 1.91
VARS2-206ENST00000473916 ABCA8O94911 1581 aa27■■□□□ 1.91
VARS2-206ENST00000473916 CLASP1Q7Z460 1538 aa26.97■■□□□ 1.91
VARS2-206ENST00000473916 PTPN23Q9H3S7 1636 aa26.93■■□□□ 1.9
VARS2-206ENST00000473916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.92■■□□□ 1.9
VARS2-206ENST00000473916 PTPRGP23470 1445 aa26.92■■□□□ 1.9
VARS2-206ENST00000473916 DHX57Q6P158 1386 aaKnown RBP26.86■■□□□ 1.89
VARS2-206ENST00000473916 RAB3GAP2Q9H2M9 1393 aa26.86■■□□□ 1.89
VARS2-206ENST00000473916 KIF14Q15058 1648 aa26.86■■□□□ 1.89
VARS2-206ENST00000473916 PTPRKQ15262 1439 aa26.86■■□□□ 1.89
VARS2-206ENST00000473916 ATP10BO94823 1461 aa26.85■■□□□ 1.89
VARS2-206ENST00000473916 TROQ12816 1431 aaPredicted RBP26.85■■□□□ 1.89
VARS2-206ENST00000473916 CDK11AQ9UQ88 783 aaPredicted RBP26.83■■□□□ 1.89
VARS2-206ENST00000473916 SETD5Q9C0A6 1442 aa26.82■■□□□ 1.88
VARS2-206ENST00000473916 TCOF1Q13428 1488 aaKnown RBP26.81■■□□□ 1.88
VARS2-206ENST00000473916 ADCY10Q96PN6 1610 aa26.8■■□□□ 1.88
VARS2-206ENST00000473916 UACAQ9BZF9 1416 aa26.76■■□□□ 1.88
VARS2-206ENST00000473916 MIA2Q96PC5 1412 aa26.76■■□□□ 1.87
VARS2-206ENST00000473916 ZNF644Q9H582 1327 aaPredicted RBP26.7■■□□□ 1.86
VARS2-206ENST00000473916 ABCC2Q92887 1545 aa26.69■■□□□ 1.86
VARS2-206ENST00000473916 PLEKHD1A6NEE1 506 aa26.69■■□□□ 1.86
VARS2-206ENST00000473916 ITSN2Q9NZM3 1697 aa26.68■■□□□ 1.86
VARS2-206ENST00000473916 GPATCH8Q9UKJ3 1502 aaKnown RBP26.67■■□□□ 1.86
VARS2-206ENST00000473916 CDC42BPAQ5VT25 1732 aa26.66■■□□□ 1.86
VARS2-206ENST00000473916 HFM1A2PYH4 1435 aa26.65■■□□□ 1.86
VARS2-206ENST00000473916 CHIC2Q9UKJ5 165 aa26.65■■□□□ 1.86
VARS2-206ENST00000473916 ABCC10Q5T3U5 1492 aa26.64■■□□□ 1.86
VARS2-206ENST00000473916 NAIPQ13075 1403 aa26.63■■□□□ 1.85
VARS2-206ENST00000473916 MAPKBP1O60336 1514 aa26.63■■□□□ 1.85
VARS2-206ENST00000473916 CAMSAP2Q08AD1 1489 aa26.6■■□□□ 1.85
VARS2-206ENST00000473916 DNMT1P26358 1616 aaKnown RBP26.6■■□□□ 1.85
VARS2-206ENST00000473916 CLSPNQ9HAW4 1339 aa26.6■■□□□ 1.85
VARS2-206ENST00000473916 CFDP1Q9UEE9 299 aaPredicted RBP26.59■■□□□ 1.85
VARS2-206ENST00000473916 RRP7BPQ9NSQ0 103 aa26.58■■□□□ 1.85
VARS2-206ENST00000473916 DAPK1P53355 1430 aa26.58■■□□□ 1.85
VARS2-206ENST00000473916 ZCCHC11Q5TAX3 1644 aaKnown RBP26.58■■□□□ 1.85
VARS2-206ENST00000473916 GCC2Q8IWJ2 1684 aa26.58■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms