RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 TOP2BQ02880 1626 aa29.67■■■□□ 2.34
HPS4-210ENST00000473782 MAPKBP1O60336 1514 aa29.66■■■□□ 2.34
HPS4-210ENST00000473782 BIVM-ERCC5R4GMW8 1640 aa29.66■■■□□ 2.34
HPS4-210ENST00000473782 DIP2BQ9P265 1576 aa29.65■■■□□ 2.34
HPS4-210ENST00000473782 ILDR1Q86SU0 546 aaPredicted RBP29.62■■■□□ 2.33
HPS4-210ENST00000473782 ADCY10Q96PN6 1610 aa29.59■■■□□ 2.33
HPS4-210ENST00000473782 RUSC2Q8N2Y8 1516 aa29.56■■■□□ 2.32
HPS4-210ENST00000473782 NPM1P06748 294 aaKnown RBP eCLIP29.56■■■□□ 2.32
HPS4-210ENST00000473782 KDM6BO15054 1643 aa29.53■■■□□ 2.32
HPS4-210ENST00000473782 TSPOAP1O95153 1857 aa29.4■■■□□ 2.3
HPS4-210ENST00000473782 SUPT5HO00267 1087 aaKnown RBP29.37■■■□□ 2.29
HPS4-210ENST00000473782 KIAA0586Q9BVV6 1533 aa29.35■■■□□ 2.29
HPS4-210ENST00000473782 IGF1RP08069 1367 aa29.27■■■□□ 2.28
HPS4-210ENST00000473782 PPRC1Q5VV67 1664 aaKnown RBP29.24■■■□□ 2.27
HPS4-210ENST00000473782 ADGRL1O94910 1474 aa29.23■■■□□ 2.27
HPS4-210ENST00000473782 PTPRGP23470 1445 aa29.22■■■□□ 2.27
HPS4-210ENST00000473782 COL17A1Q9UMD9 1497 aaPredicted RBP29.21■■■□□ 2.27
HPS4-210ENST00000473782 ABCC2Q92887 1545 aa29.18■■■□□ 2.26
HPS4-210ENST00000473782 ASXL2Q76L83 1435 aa29.18■■■□□ 2.26
HPS4-210ENST00000473782 GLI2P10070 1586 aa29.18■■■□□ 2.26
HPS4-210ENST00000473782 PLB1Q6P1J6 1458 aa29.11■■■□□ 2.25
HPS4-210ENST00000473782 TTBK1Q5TCY1 1321 aaPredicted RBP29.11■■■□□ 2.25
HPS4-210ENST00000473782 TNIKQ9UKE5 1360 aa29.1■■■□□ 2.25
HPS4-210ENST00000473782 HECW2Q9P2P5 1572 aa29.08■■■□□ 2.25
HPS4-210ENST00000473782 CUL7Q14999 1698 aa29.06■■■□□ 2.24
HPS4-210ENST00000473782 UHRF1BP1LA0JNW5 1464 aa29.05■■■□□ 2.24
HPS4-210ENST00000473782 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
HPS4-210ENST00000473782 EPRSP07814 1512 aaKnown RBP29■■■□□ 2.23
HPS4-210ENST00000473782 CARMIL2Q6F5E8 1435 aa29■■■□□ 2.23
HPS4-210ENST00000473782 UACAQ9BZF9 1416 aa28.99■■■□□ 2.23
HPS4-210ENST00000473782 CARMIL1Q5VZK9 1371 aa28.99■■■□□ 2.23
HPS4-210ENST00000473782 MAP3K4Q9Y6R4 1608 aa28.97■■■□□ 2.23
HPS4-210ENST00000473782 DISP1Q96F81 1524 aa28.94■■■□□ 2.22
HPS4-210ENST00000473782 KDM5BQ9UGL1 1544 aa28.94■■■□□ 2.22
HPS4-210ENST00000473782 IQGAP2Q13576 1575 aa28.89■■■□□ 2.22
HPS4-210ENST00000473782 TEX14Q8IWB6 1497 aa28.87■■■□□ 2.21
HPS4-210ENST00000473782 ZCCHC11Q5TAX3 1644 aaKnown RBP28.82■■■□□ 2.2
HPS4-210ENST00000473782 UGGT2Q9NYU1 1516 aa28.75■■■□□ 2.19
HPS4-210ENST00000473782 WDR7Q9Y4E6 1490 aa28.72■■■□□ 2.19
HPS4-210ENST00000473782 FBXO41Q8TF61 875 aa28.71■■■□□ 2.19
HPS4-210ENST00000473782 MAGI3Q5TCQ9 1506 aa28.69■■■□□ 2.18
HPS4-210ENST00000473782 KIAA0556O60303 1618 aa28.68■■■□□ 2.18
HPS4-210ENST00000473782 CD109Q6YHK3 1445 aa28.65■■■□□ 2.18
HPS4-210ENST00000473782 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
HPS4-210ENST00000473782 KCNH8Q96L42 1107 aa28.57■■■□□ 2.16
HPS4-210ENST00000473782 KIF21BO75037 1637 aa28.57■■■□□ 2.16
HPS4-210ENST00000473782 CFAP43Q8NDM7 1665 aa28.56■■■□□ 2.16
HPS4-210ENST00000473782 ABCA8O94911 1581 aa28.52■■■□□ 2.16
HPS4-210ENST00000473782 ARAP3Q8WWN8 1544 aa28.48■■■□□ 2.15
HPS4-210ENST00000473782 PTPRMP28827 1452 aa28.46■■■□□ 2.15
HPS4-210ENST00000473782 ADAMTSL3P82987 1691 aa28.44■■■□□ 2.14
HPS4-210ENST00000473782 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
HPS4-210ENST00000473782 RAPGEF3O95398 923 aa28.33■■■□□ 2.13
HPS4-210ENST00000473782 LMTK3Q96Q04 1460 aa28.32■■■□□ 2.12
HPS4-210ENST00000473782 ATP10BO94823 1461 aa28.31■■■□□ 2.12
HPS4-210ENST00000473782 CTTNBP2Q8WZ74 1663 aa28.3■■■□□ 2.12
HPS4-210ENST00000473782 PCF11O94913 1555 aaKnown RBP28.29■■■□□ 2.12
HPS4-210ENST00000473782 PHLDB1Q86UU1 1377 aa28.28■■■□□ 2.12
HPS4-210ENST00000473782 ARID3CA6NKF2 412 aa28.27■■■□□ 2.12
HPS4-210ENST00000473782 BCORL1Q5H9F3 1711 aa28.26■■■□□ 2.11
HPS4-210ENST00000473782 ABCA9Q8IUA7 1624 aa28.25■■■□□ 2.11
HPS4-210ENST00000473782 MADDQ8WXG6 1647 aa28.24■■■□□ 2.11
HPS4-210ENST00000473782 FRMPD1Q5SYB0 1578 aa28.23■■■□□ 2.11
HPS4-210ENST00000473782 NEO1Q92859 1461 aa28.19■■■□□ 2.1
HPS4-210ENST00000473782 PRXQ9BXM0 1461 aa28.18■■■□□ 2.1
HPS4-210ENST00000473782 HSPA2P54652 639 aa28.14■■■□□ 2.1
HPS4-210ENST00000473782 P3H3Q8IVL6 736 aa28.14■■■□□ 2.1
HPS4-210ENST00000473782 ARID4BQ4LE39 1312 aaPredicted RBP28.14■■■□□ 2.09
HPS4-210ENST00000473782 RIMS1Q86UR5 1692 aaKnown RBP28.07■■■□□ 2.08
HPS4-210ENST00000473782 CERKQ8TCT0 537 aa28.06■■■□□ 2.08
HPS4-210ENST00000473782 ARHGEF40Q8TER5 1519 aa28.05■■■□□ 2.08
HPS4-210ENST00000473782 ILDR2Q71H61 639 aa28■■■□□ 2.07
HPS4-210ENST00000473782 SIGLEC1Q9BZZ2 1709 aa28■■■□□ 2.07
HPS4-210ENST00000473782 FHOD3Q2V2M9 1422 aa27.99■■■□□ 2.07
HPS4-210ENST00000473782 DENND4BO75064 1496 aaPredicted RBP27.98■■■□□ 2.07
HPS4-210ENST00000473782 RICTORQ6R327 1708 aa27.98■■■□□ 2.07
HPS4-210ENST00000473782 RAPGEF6Q8TEU7 1601 aa27.97■■■□□ 2.07
HPS4-210ENST00000473782 SAMD9Q5K651 1589 aa27.97■■■□□ 2.07
HPS4-210ENST00000473782 NUP153P49790 1475 aaKnown RBP27.96■■■□□ 2.07
HPS4-210ENST00000473782 AKNAQ7Z591 1439 aa27.95■■■□□ 2.07
HPS4-210ENST00000473782 PLPPR3Q6T4P5 718 aa27.94■■■□□ 2.06
HPS4-210ENST00000473782 FAM9AQ8IZU1 332 aaPredicted RBP27.94■■■□□ 2.06
HPS4-210ENST00000473782 YEATS2Q9ULM3 1422 aa27.92■■■□□ 2.06
HPS4-210ENST00000473782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.92■■■□□ 2.06
HPS4-210ENST00000473782 HNRNPUL2Q1KMD3 747 aaKnown RBP27.92■■■□□ 2.06
HPS4-210ENST00000473782 ZMYM4Q5VZL5 1548 aa27.88■■■□□ 2.05
HPS4-210ENST00000473782 FANCAO15360 1455 aa27.88■■■□□ 2.05
HPS4-210ENST00000473782 POGZQ7Z3K3 1410 aa27.86■■■□□ 2.05
HPS4-210ENST00000473782 SOCS7O14512 581 aa27.86■■■□□ 2.05
HPS4-210ENST00000473782 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.84■■■□□ 2.05
HPS4-210ENST00000473782 ZFYVE16Q7Z3T8 1539 aa27.83■■■□□ 2.05
HPS4-210ENST00000473782 DISP3Q9P2K9 1392 aa27.83■■■□□ 2.05
HPS4-210ENST00000473782 MLECQ14165 292 aa27.82■■■□□ 2.04
HPS4-210ENST00000473782 TTC37Q6PGP7 1564 aa27.82■■■□□ 2.04
HPS4-210ENST00000473782 PLEKHD1A6NEE1 506 aa27.81■■■□□ 2.04
HPS4-210ENST00000473782 EFCAB5A4FU69 1503 aa27.79■■■□□ 2.04
HPS4-210ENST00000473782 MAGI2Q86UL8 1455 aa27.79■■■□□ 2.04
HPS4-210ENST00000473782 HECW1Q76N89 1606 aa27.78■■■□□ 2.04
HPS4-210ENST00000473782 CFAP74Q9C0B2 1584 aa27.76■■■□□ 2.03
HPS4-210ENST00000473782 ARHGEF12Q9NZN5 1544 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms