RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 PRG4Q92954 1404 aaPredicted RBP15.15■□□□□ 0.02
SMG5-203ENST00000473643 KIAA0586Q9BVV6 1533 aa15.13■□□□□ 0.01
SMG5-203ENST00000473643 CUL7Q14999 1698 aa15.12■□□□□ 0.01
SMG5-203ENST00000473643 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
SMG5-203ENST00000473643 RUSC2Q8N2Y8 1516 aa15.1■□□□□ 0.01
SMG5-203ENST00000473643 EEA1Q15075 1411 aa15.09■□□□□ 0.01
SMG5-203ENST00000473643 RAPGEF2Q9Y4G8 1499 aa15.04■□□□□ -0
SMG5-203ENST00000473643 CSRNP3Q8WYN3 585 aa15.04■□□□□ -0
SMG5-203ENST00000473643 FAM9AQ8IZU1 332 aaPredicted RBP14.99□□□□□ -0.01
SMG5-203ENST00000473643 PTPRGP23470 1445 aa14.97□□□□□ -0.01
SMG5-203ENST00000473643 CARMIL2Q6F5E8 1435 aa14.97□□□□□ -0.01
SMG5-203ENST00000473643 PRXQ9BXM0 1461 aa14.96□□□□□ -0.01
SMG5-203ENST00000473643 NPM1P06748 294 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMG5-203ENST00000473643 TNIKQ9UKE5 1360 aa14.95□□□□□ -0.02
SMG5-203ENST00000473643 IQGAP2Q13576 1575 aa14.94□□□□□ -0.02
SMG5-203ENST00000473643 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
SMG5-203ENST00000473643 UGGT2Q9NYU1 1516 aa14.91□□□□□ -0.02
SMG5-203ENST00000473643 TTBK1Q5TCY1 1321 aaPredicted RBP14.89□□□□□ -0.03
SMG5-203ENST00000473643 ADCY10Q96PN6 1610 aa14.88□□□□□ -0.03
SMG5-203ENST00000473643 MAPKBP1O60336 1514 aa14.86□□□□□ -0.03
SMG5-203ENST00000473643 FAM69CQ0P6D2 419 aa14.85□□□□□ -0.03
SMG5-203ENST00000473643 KIF21BO75037 1637 aa14.84□□□□□ -0.03
SMG5-203ENST00000473643 UACAQ9BZF9 1416 aa14.84□□□□□ -0.03
SMG5-203ENST00000473643 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
SMG5-203ENST00000473643 UHRF1BP1LA0JNW5 1464 aa14.83□□□□□ -0.03
SMG5-203ENST00000473643 ABCC2Q92887 1545 aa14.82□□□□□ -0.04
SMG5-203ENST00000473643 GOLGA3Q08378 1498 aa14.82□□□□□ -0.04
SMG5-203ENST00000473643 KIAA0556O60303 1618 aa14.8□□□□□ -0.04
SMG5-203ENST00000473643 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
SMG5-203ENST00000473643 KDM5BQ9UGL1 1544 aa14.76□□□□□ -0.05
SMG5-203ENST00000473643 CTTNBP2Q8WZ74 1663 aa14.76□□□□□ -0.05
SMG5-203ENST00000473643 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
SMG5-203ENST00000473643 UBTFP17480 764 aaKnown RBP14.75□□□□□ -0.05
SMG5-203ENST00000473643 KIF13AQ9H1H9 1805 aa14.75□□□□□ -0.05
SMG5-203ENST00000473643 PLB1Q6P1J6 1458 aa14.75□□□□□ -0.05
SMG5-203ENST00000473643 DIP2BQ9P265 1576 aa14.74□□□□□ -0.05
SMG5-203ENST00000473643 P3H3Q8IVL6 736 aa14.73□□□□□ -0.05
SMG5-203ENST00000473643 EHMT2Q96KQ7 1210 aa14.72□□□□□ -0.05
SMG5-203ENST00000473643 ABCA8O94911 1581 aa14.68□□□□□ -0.06
SMG5-203ENST00000473643 GLI2P10070 1586 aa14.67□□□□□ -0.06
SMG5-203ENST00000473643 EPRSP07814 1512 aaKnown RBP14.66□□□□□ -0.06
SMG5-203ENST00000473643 SAMD9Q5K651 1589 aa14.65□□□□□ -0.06
SMG5-203ENST00000473643 RANGAP1P46060 587 aaPredicted RBP14.65□□□□□ -0.06
SMG5-203ENST00000473643 ZCCHC11Q5TAX3 1644 aaKnown RBP14.64□□□□□ -0.07
SMG5-203ENST00000473643 WDR7Q9Y4E6 1490 aa14.63□□□□□ -0.07
SMG5-203ENST00000473643 ATP10BO94823 1461 aa14.62□□□□□ -0.07
SMG5-203ENST00000473643 KCNH8Q96L42 1107 aa14.61□□□□□ -0.07
SMG5-203ENST00000473643 FHOD3Q2V2M9 1422 aa14.59□□□□□ -0.07
SMG5-203ENST00000473643 ARID3CA6NKF2 412 aa14.59□□□□□ -0.07
SMG5-203ENST00000473643 CLIP1P30622 1438 aa14.57□□□□□ -0.08
SMG5-203ENST00000473643 CEP162Q5TB80 1403 aa14.57□□□□□ -0.08
SMG5-203ENST00000473643 EFCAB5A4FU69 1503 aa14.56□□□□□ -0.08
SMG5-203ENST00000473643 TSPOAP1O95153 1857 aa14.55□□□□□ -0.08
SMG5-203ENST00000473643 CD109Q6YHK3 1445 aa14.55□□□□□ -0.08
SMG5-203ENST00000473643 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
SMG5-203ENST00000473643 MAP3K4Q9Y6R4 1608 aa14.55□□□□□ -0.08
SMG5-203ENST00000473643 ARHGAP35Q9NRY4 1499 aa14.54□□□□□ -0.08
SMG5-203ENST00000473643 PPRC1Q5VV67 1664 aaKnown RBP14.54□□□□□ -0.08
SMG5-203ENST00000473643 KDM6BO15054 1643 aa14.53□□□□□ -0.08
SMG5-203ENST00000473643 RAPGEF6Q8TEU7 1601 aa14.53□□□□□ -0.08
SMG5-203ENST00000473643 TEX14Q8IWB6 1497 aa14.53□□□□□ -0.08
SMG5-203ENST00000473643 COL17A1Q9UMD9 1497 aaPredicted RBP14.53□□□□□ -0.08
SMG5-203ENST00000473643 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
SMG5-203ENST00000473643 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
SMG5-203ENST00000473643 MAGI3Q5TCQ9 1506 aa14.52□□□□□ -0.08
SMG5-203ENST00000473643 PLEKHD1A6NEE1 506 aa14.5□□□□□ -0.09
SMG5-203ENST00000473643 AEBP2Q6ZN18 517 aaPredicted RBP14.48□□□□□ -0.09
SMG5-203ENST00000473643 FMN1Q68DA7 1419 aa14.48□□□□□ -0.09
SMG5-203ENST00000473643 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.1
SMG5-203ENST00000473643 PHLDB1Q86UU1 1377 aa14.44□□□□□ -0.1
SMG5-203ENST00000473643 ABCA9Q8IUA7 1624 aa14.42□□□□□ -0.1
SMG5-203ENST00000473643 KDM4FA0A1W2PPD8 638 aa14.42□□□□□ -0.1
SMG5-203ENST00000473643 ATP1B4Q9UN42 357 aaPredicted RBP14.42□□□□□ -0.1
SMG5-203ENST00000473643 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
SMG5-203ENST00000473643 CDK11AQ9UQ88 783 aaPredicted RBP14.4□□□□□ -0.1
SMG5-203ENST00000473643 VPS8Q8N3P4 1428 aa14.4□□□□□ -0.1
SMG5-203ENST00000473643 CDK13Q14004 1512 aaKnown RBP14.38□□□□□ -0.11
SMG5-203ENST00000473643 NEO1Q92859 1461 aa14.38□□□□□ -0.11
SMG5-203ENST00000473643 CASKIN1Q8WXD9 1431 aa14.36□□□□□ -0.11
SMG5-203ENST00000473643 RAPGEF3O95398 923 aa14.36□□□□□ -0.11
SMG5-203ENST00000473643 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMG5-203ENST00000473643 HECW1Q76N89 1606 aa14.33□□□□□ -0.11
SMG5-203ENST00000473643 PLCH2O75038 1416 aa14.32□□□□□ -0.12
SMG5-203ENST00000473643 TROQ12816 1431 aaPredicted RBP14.32□□□□□ -0.12
SMG5-203ENST00000473643 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
SMG5-203ENST00000473643 FYCO1Q9BQS8 1478 aa14.31□□□□□ -0.12
SMG5-203ENST00000473643 FANCAO15360 1455 aa14.31□□□□□ -0.12
SMG5-203ENST00000473643 EFCAB2Q5VUJ9 269 aa14.29□□□□□ -0.12
SMG5-203ENST00000473643 TTC37Q6PGP7 1564 aa14.28□□□□□ -0.12
SMG5-203ENST00000473643 PCF11O94913 1555 aaKnown RBP14.27□□□□□ -0.12
SMG5-203ENST00000473643 DENND4BO75064 1496 aaPredicted RBP14.27□□□□□ -0.12
SMG5-203ENST00000473643 ADGRL1O94910 1474 aa14.27□□□□□ -0.12
SMG5-203ENST00000473643 CCDC18Q5T9S5 1454 aa14.27□□□□□ -0.12
SMG5-203ENST00000473643 MAP3K1Q13233 1512 aa14.25□□□□□ -0.13
SMG5-203ENST00000473643 SCAPERQ9BY12 1400 aa14.24□□□□□ -0.13
SMG5-203ENST00000473643 KIF14Q15058 1648 aa14.23□□□□□ -0.13
SMG5-203ENST00000473643 FRMPD1Q5SYB0 1578 aa14.22□□□□□ -0.13
SMG5-203ENST00000473643 LRRIQ1Q96JM4 1722 aa14.22□□□□□ -0.13
SMG5-203ENST00000473643 APLP2Q06481 763 aa14.22□□□□□ -0.13
SMG5-203ENST00000473643 CFAP74Q9C0B2 1584 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms