RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 TOP2AP11388 1531 aaKnown RBP12.46□□□□□ -0.42
CCDC171-205ENST00000472806 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
CCDC171-205ENST00000472806 TRIM41Q8WV44 630 aa12.42□□□□□ -0.42
CCDC171-205ENST00000472806 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
CCDC171-205ENST00000472806 ZRANB1Q9UGI0 708 aa12.38□□□□□ -0.43
CCDC171-205ENST00000472806 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
CCDC171-205ENST00000472806 PEG3Q9GZU2 1588 aa12.35□□□□□ -0.43
CCDC171-205ENST00000472806 LHX8Q68G74 356 aa12.33□□□□□ -0.44
CCDC171-205ENST00000472806 SMARCA2P51531 1590 aa12.31□□□□□ -0.44
CCDC171-205ENST00000472806 ZNF579Q8NAF0 562 aaKnown RBP12.31□□□□□ -0.44
CCDC171-205ENST00000472806 EIF4G1Q04637 1599 aaKnown RBP12.3□□□□□ -0.44
CCDC171-205ENST00000472806 GALR2O43603 387 aaPredicted RBP12.29□□□□□ -0.44
CCDC171-205ENST00000472806 CCDC88BA6NC98 1476 aa12.28□□□□□ -0.44
CCDC171-205ENST00000472806 PROM2Q8N271 834 aa12.28□□□□□ -0.44
CCDC171-205ENST00000472806 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
CCDC171-205ENST00000472806 LOC105371045A0A1W2PR82 267 aa12.24□□□□□ -0.45
CCDC171-205ENST00000472806 DCBLD2Q96PD2 775 aa12.21□□□□□ -0.45
CCDC171-205ENST00000472806 ATAD2BQ9ULI0 1458 aa12.21□□□□□ -0.46
CCDC171-205ENST00000472806 BAZ1BQ9UIG0 1483 aaKnown RBP12.19□□□□□ -0.46
CCDC171-205ENST00000472806 NPM1P06748 294 aaKnown RBP eCLIP12.15□□□□□ -0.46
CCDC171-205ENST00000472806 CLCN6P51797 869 aa12.15□□□□□ -0.46
CCDC171-205ENST00000472806 EEA1Q15075 1411 aa12.14□□□□□ -0.47
CCDC171-205ENST00000472806 PAK3O75914 559 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-205ENST00000472806 FAM9AQ8IZU1 332 aaPredicted RBP12.12□□□□□ -0.47
CCDC171-205ENST00000472806 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
CCDC171-205ENST00000472806 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
CCDC171-205ENST00000472806 HMGXB3Q12766 1538 aa12.1□□□□□ -0.47
CCDC171-205ENST00000472806 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
CCDC171-205ENST00000472806 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
CCDC171-205ENST00000472806 TRIM26Q12899 539 aaPredicted RBP12.08□□□□□ -0.48
CCDC171-205ENST00000472806 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.48
CCDC171-205ENST00000472806 PCGF6Q9BYE7 350 aa12.08□□□□□ -0.48
CCDC171-205ENST00000472806 NCAPD3P42695 1498 aa12.07□□□□□ -0.48
CCDC171-205ENST00000472806 WRNQ14191 1432 aaPredicted RBP eCLIP12.06□□□□□ -0.48
CCDC171-205ENST00000472806 HRCP23327 699 aa12.03□□□□□ -0.48
CCDC171-205ENST00000472806 MIER1Q8N108 512 aa12.03□□□□□ -0.48
CCDC171-205ENST00000472806 CCDC61Q9Y6R9 512 aa12.01□□□□□ -0.49
CCDC171-205ENST00000472806 RASEFQ8IZ41 740 aa11.99□□□□□ -0.49
CCDC171-205ENST00000472806 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
CCDC171-205ENST00000472806 TRPC6Q9Y210 931 aa11.98□□□□□ -0.49
CCDC171-205ENST00000472806 FKBP8Q14318 412 aa11.96□□□□□ -0.49
CCDC171-205ENST00000472806 TNIKQ9UKE5 1360 aa11.95□□□□□ -0.5
CCDC171-205ENST00000472806 ATMINO43313 823 aaPredicted RBP11.95□□□□□ -0.5
CCDC171-205ENST00000472806 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
CCDC171-205ENST00000472806 KIF12Q96FN5 646 aa11.94□□□□□ -0.5
CCDC171-205ENST00000472806 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
CCDC171-205ENST00000472806 SOGA1O94964 1423 aa11.94□□□□□ -0.5
CCDC171-205ENST00000472806 SYNJ1O43426 1573 aa11.93□□□□□ -0.5
CCDC171-205ENST00000472806 POTEJP0CG39 1038 aa11.92□□□□□ -0.5
CCDC171-205ENST00000472806 CEP164Q9UPV0 1460 aa11.91□□□□□ -0.5
CCDC171-205ENST00000472806 TOP2BQ02880 1626 aa11.91□□□□□ -0.5
CCDC171-205ENST00000472806 BIVM-ERCC5R4GMW8 1640 aa11.9□□□□□ -0.5
CCDC171-205ENST00000472806 MAP3K13O43283 966 aa11.9□□□□□ -0.5
CCDC171-205ENST00000472806 KIF21BO75037 1637 aa11.89□□□□□ -0.51
CCDC171-205ENST00000472806 ATN1P54259 1190 aaPredicted RBP11.89□□□□□ -0.51
CCDC171-205ENST00000472806 PLCD3Q8N3E9 789 aa11.89□□□□□ -0.51
CCDC171-205ENST00000472806 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
CCDC171-205ENST00000472806 CFTRP13569 1480 aa11.88□□□□□ -0.51
CCDC171-205ENST00000472806 CEP162Q5TB80 1403 aa11.87□□□□□ -0.51
CCDC171-205ENST00000472806 ZEB1P37275 1124 aaPredicted RBP11.87□□□□□ -0.51
CCDC171-205ENST00000472806 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
CCDC171-205ENST00000472806 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
CCDC171-205ENST00000472806 UBTFP17480 764 aaKnown RBP11.84□□□□□ -0.51
CCDC171-205ENST00000472806 NUBP1P53384 320 aa11.84□□□□□ -0.51
CCDC171-205ENST00000472806 BMP2KQ9NSY1 1161 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-205ENST00000472806 RUSC2Q8N2Y8 1516 aa11.84□□□□□ -0.51
CCDC171-205ENST00000472806 POTEFA5A3E0 1075 aa11.82□□□□□ -0.52
CCDC171-205ENST00000472806 SLC39A7Q92504 469 aa11.8□□□□□ -0.52
CCDC171-205ENST00000472806 CC2D2AQ9P2K1 1620 aa11.79□□□□□ -0.52
CCDC171-205ENST00000472806 C7P10643 843 aa11.79□□□□□ -0.52
CCDC171-205ENST00000472806 CADPSQ9ULU8 1353 aa11.79□□□□□ -0.52
CCDC171-205ENST00000472806 ERICH3Q5RHP9 1530 aa11.78□□□□□ -0.52
CCDC171-205ENST00000472806 KIF27Q86VH2 1401 aa11.77□□□□□ -0.53
CCDC171-205ENST00000472806 CUX1P39880 1505 aa11.76□□□□□ -0.53
CCDC171-205ENST00000472806 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
CCDC171-205ENST00000472806 CLIP1P30622 1438 aa11.73□□□□□ -0.53
CCDC171-205ENST00000472806 COLQQ9Y215 455 aaPredicted RBP11.72□□□□□ -0.53
CCDC171-205ENST00000472806 PCDHB13Q9Y5F0 798 aa11.72□□□□□ -0.53
CCDC171-205ENST00000472806 PRXQ9BXM0 1461 aa11.71□□□□□ -0.53
CCDC171-205ENST00000472806 TIE1P35590 1138 aa11.71□□□□□ -0.53
CCDC171-205ENST00000472806 RAPGEF2Q9Y4G8 1499 aa11.7□□□□□ -0.54
CCDC171-205ENST00000472806 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
CCDC171-205ENST00000472806 VPS8Q8N3P4 1428 aa11.69□□□□□ -0.54
CCDC171-205ENST00000472806 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
CCDC171-205ENST00000472806 TRIM35Q9UPQ4 493 aa11.65□□□□□ -0.54
CCDC171-205ENST00000472806 FANCD2Q9BXW9 1451 aa11.64□□□□□ -0.55
CCDC171-205ENST00000472806 FAM212AQ96EL1 285 aa11.64□□□□□ -0.55
CCDC171-205ENST00000472806 LAMC3Q9Y6N6 1575 aa11.63□□□□□ -0.55
CCDC171-205ENST00000472806 PYGBP11216 843 aa11.63□□□□□ -0.55
CCDC171-205ENST00000472806 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
CCDC171-205ENST00000472806 POTEMA6NI47 508 aa11.62□□□□□ -0.55
CCDC171-205ENST00000472806 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
CCDC171-205ENST00000472806 PPARGC1BQ86YN6 1023 aaKnown RBP11.62□□□□□ -0.55
CCDC171-205ENST00000472806 CUX2O14529 1486 aa11.62□□□□□ -0.55
CCDC171-205ENST00000472806 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
CCDC171-205ENST00000472806 PLSCR2Q9NRY7 297 aa11.61□□□□□ -0.55
CCDC171-205ENST00000472806 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
CCDC171-205ENST00000472806 SGIP1Q9BQI5 828 aa11.6□□□□□ -0.55
CCDC171-205ENST00000472806 POTEGQ6S5H5 508 aa11.59□□□□□ -0.55
CCDC171-205ENST00000472806 TMEM106CQ9BVX2 250 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms