RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 CANXP27824 592 aaKnown RBP16.87■□□□□ 0.29
IRF1-208ENST00000472045 C14orf37Q86TY3 774 aa16.87■□□□□ 0.29
IRF1-208ENST00000472045 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
IRF1-208ENST00000472045 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
IRF1-208ENST00000472045 CADPSQ9ULU8 1353 aa16.86■□□□□ 0.29
IRF1-208ENST00000472045 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
IRF1-208ENST00000472045 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
IRF1-208ENST00000472045 CARMIL2Q6F5E8 1435 aa16.81■□□□□ 0.28
IRF1-208ENST00000472045 ATAD2BQ9ULI0 1458 aa16.78■□□□□ 0.28
IRF1-208ENST00000472045 CCNB3Q8WWL7 1395 aa16.77■□□□□ 0.27
IRF1-208ENST00000472045 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.27
IRF1-208ENST00000472045 FHAD1B1AJZ9 1412 aa16.75■□□□□ 0.27
IRF1-208ENST00000472045 BCL11AQ9H165 835 aa16.75■□□□□ 0.27
IRF1-208ENST00000472045 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
IRF1-208ENST00000472045 RGL3Q3MIN7 710 aa16.73■□□□□ 0.27
IRF1-208ENST00000472045 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
IRF1-208ENST00000472045 MLECQ14165 292 aa16.72■□□□□ 0.27
IRF1-208ENST00000472045 ZBTB7CA1YPR0 619 aa16.69■□□□□ 0.26
IRF1-208ENST00000472045 WIZO95785 1651 aa16.69■□□□□ 0.26
IRF1-208ENST00000472045 A0A0G2JS52 829 aa16.68■□□□□ 0.26
IRF1-208ENST00000472045 HAP1P54257 671 aaPredicted RBP16.67■□□□□ 0.26
IRF1-208ENST00000472045 ABCC8Q09428 1581 aa16.67■□□□□ 0.26
IRF1-208ENST00000472045 SMARCA4P51532 1647 aa16.66■□□□□ 0.26
IRF1-208ENST00000472045 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
IRF1-208ENST00000472045 KANK1Q14678 1352 aa16.63■□□□□ 0.25
IRF1-208ENST00000472045 TMC1Q8TDI8 760 aa16.62■□□□□ 0.25
IRF1-208ENST00000472045 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
IRF1-208ENST00000472045 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
IRF1-208ENST00000472045 EIF4G2P78344 907 aaKnown RBP eCLIP16.58■□□□□ 0.24
IRF1-208ENST00000472045 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
IRF1-208ENST00000472045 EFCAB2Q5VUJ9 269 aa16.57■□□□□ 0.24
IRF1-208ENST00000472045 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
IRF1-208ENST00000472045 MYT1Q01538 1121 aa16.56■□□□□ 0.24
IRF1-208ENST00000472045 GGT6Q6P531 493 aa16.56■□□□□ 0.24
IRF1-208ENST00000472045 POGKQ9P215 609 aa16.56■□□□□ 0.24
IRF1-208ENST00000472045 JPH4Q96JJ6 628 aa16.56■□□□□ 0.24
IRF1-208ENST00000472045 NPM2Q86SE8 214 aaKnown RBP16.55■□□□□ 0.24
IRF1-208ENST00000472045 FAM9BQ8IZU0 186 aa16.55■□□□□ 0.24
IRF1-208ENST00000472045 FMN1Q68DA7 1419 aa16.53■□□□□ 0.24
IRF1-208ENST00000472045 CDCA8Q53HL2 280 aa16.52■□□□□ 0.24
IRF1-208ENST00000472045 LMOD2Q6P5Q4 547 aa16.52■□□□□ 0.24
IRF1-208ENST00000472045 SALL2Q9Y467 1007 aaPredicted RBP16.52■□□□□ 0.24
IRF1-208ENST00000472045 CYB5RLQ6IPT4 315 aa16.52■□□□□ 0.23
IRF1-208ENST00000472045 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
IRF1-208ENST00000472045 CARD11Q9BXL7 1154 aa16.49■□□□□ 0.23
IRF1-208ENST00000472045 HIRIP3Q9BW71 556 aaPredicted RBP16.48■□□□□ 0.23
IRF1-208ENST00000472045 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.23
IRF1-208ENST00000472045 ARHGAP35Q9NRY4 1499 aa16.46■□□□□ 0.22
IRF1-208ENST00000472045 MRS2Q9HD23 443 aa16.44■□□□□ 0.22
IRF1-208ENST00000472045 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
IRF1-208ENST00000472045 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
IRF1-208ENST00000472045 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
IRF1-208ENST00000472045 VPS8Q8N3P4 1428 aa16.42■□□□□ 0.22
IRF1-208ENST00000472045 KNSTRNQ9Y448 316 aa16.41■□□□□ 0.22
IRF1-208ENST00000472045 PTPRGP23470 1445 aa16.4■□□□□ 0.22
IRF1-208ENST00000472045 FHOD3Q2V2M9 1422 aa16.39■□□□□ 0.21
IRF1-208ENST00000472045 DCAF11Q8TEB1 546 aa16.37■□□□□ 0.21
IRF1-208ENST00000472045 KIF3BO15066 747 aa16.36■□□□□ 0.21
IRF1-208ENST00000472045 SPAG9O60271 1321 aaKnown RBP16.36■□□□□ 0.21
IRF1-208ENST00000472045 RTL5Q5HYW3 569 aaPredicted RBP16.36■□□□□ 0.21
IRF1-208ENST00000472045 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
IRF1-208ENST00000472045 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
IRF1-208ENST00000472045 ANKRD30AQ9BXX3 1397 aa16.34■□□□□ 0.21
IRF1-208ENST00000472045 HNRNPMP52272 730 aaKnown RBP eCLIP16.34■□□□□ 0.21
IRF1-208ENST00000472045 FGD5Q6ZNL6 1462 aa16.34■□□□□ 0.21
IRF1-208ENST00000472045 KANK4Q5T7N3 995 aaPredicted RBP16.33■□□□□ 0.21
IRF1-208ENST00000472045 SIN3AQ96ST3 1273 aa16.33■□□□□ 0.21
IRF1-208ENST00000472045 CCDC18Q5T9S5 1454 aa16.33■□□□□ 0.2
IRF1-208ENST00000472045 PKD2Q13563 968 aa16.32■□□□□ 0.2
IRF1-208ENST00000472045 RSPH4AQ5TD94 716 aa16.32■□□□□ 0.2
IRF1-208ENST00000472045 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
IRF1-208ENST00000472045 RAD54L2Q9Y4B4 1467 aa16.3■□□□□ 0.2
IRF1-208ENST00000472045 SAFB2Q14151 953 aaKnown RBP eCLIP16.3■□□□□ 0.2
IRF1-208ENST00000472045 ARXQ96QS3 562 aa16.3■□□□□ 0.2
IRF1-208ENST00000472045 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
IRF1-208ENST00000472045 WASHC2CQ9Y4E1 1318 aa16.29■□□□□ 0.2
IRF1-208ENST00000472045 STK26Q9P289 416 aa16.29■□□□□ 0.2
IRF1-208ENST00000472045 NUP155O75694 1391 aa16.29■□□□□ 0.2
IRF1-208ENST00000472045 EID1Q9Y6B2 187 aa16.28■□□□□ 0.2
IRF1-208ENST00000472045 NUDCQ9Y266 331 aa16.28■□□□□ 0.2
IRF1-208ENST00000472045 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.2
IRF1-208ENST00000472045 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■■■■■ 27.8
IRF1-208ENST00000472045 TMF1P82094 1093 aa16.26■□□□□ 0.19
IRF1-208ENST00000472045 SETD5Q9C0A6 1442 aa16.25■□□□□ 0.19
IRF1-208ENST00000472045 FAM69CQ0P6D2 419 aa16.25■□□□□ 0.19
IRF1-208ENST00000472045 MAPK8IP3Q9UPT6 1336 aa16.24■□□□□ 0.19
IRF1-208ENST00000472045 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
IRF1-208ENST00000472045 TNNT2P45379 298 aaPredicted RBP16.24■□□□□ 0.19
IRF1-208ENST00000472045 SOX12O15370 315 aa16.23■□□□□ 0.19
IRF1-208ENST00000472045 MRC2Q9UBG0 1479 aa16.21■□□□□ 0.19
IRF1-208ENST00000472045 FOXD1Q16676 465 aa16.2■□□□□ 0.18
IRF1-208ENST00000472045 NESP48681 1621 aa16.19■□□□□ 0.18
IRF1-208ENST00000472045 AEBP2Q6ZN18 517 aaPredicted RBP16.18■□□□□ 0.18
IRF1-208ENST00000472045 IGF1RP08069 1367 aa16.18■□□□□ 0.18
IRF1-208ENST00000472045 UPF2Q9HAU5 1272 aaKnown RBP16.18■□□□□ 0.18
IRF1-208ENST00000472045 FKBP8Q14318 412 aa16.18■□□□□ 0.18
IRF1-208ENST00000472045 MPHOSPH9Q99550 1183 aa16.17■□□□□ 0.18
IRF1-208ENST00000472045 GRIN2BQ13224 1484 aa16.17■□□□□ 0.18
IRF1-208ENST00000472045 U2SURPO15042 1029 aaKnown RBP16.17■□□□□ 0.18
IRF1-208ENST00000472045 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1142.8 ms