RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 JPH4Q96JJ6 628 aa35.65■■■■□ 3.3
CCDC78-208ENST00000471861 ABCC10Q5T3U5 1492 aa35.55■■■■□ 3.28
CCDC78-208ENST00000471861 MAPKBP1O60336 1514 aa35.52■■■■□ 3.28
CCDC78-208ENST00000471861 ADCY10Q96PN6 1610 aa35.5■■■■□ 3.27
CCDC78-208ENST00000471861 DIP2BQ9P265 1576 aa35.49■■■■□ 3.27
CCDC78-208ENST00000471861 FAM69CQ0P6D2 419 aa35.47■■■■□ 3.27
CCDC78-208ENST00000471861 KIAA0586Q9BVV6 1533 aa35.36■■■■□ 3.25
CCDC78-208ENST00000471861 NPM1P06748 294 aaKnown RBP eCLIP35.35■■■■□ 3.25
CCDC78-208ENST00000471861 IGF1RP08069 1367 aa35.3■■■■□ 3.24
CCDC78-208ENST00000471861 KDM6BO15054 1643 aa35.27■■■■□ 3.24
CCDC78-208ENST00000471861 CUL7Q14999 1698 aa35.26■■■■□ 3.23
CCDC78-208ENST00000471861 KIF27Q86VH2 1401 aa35.21■■■■□ 3.23
CCDC78-208ENST00000471861 TSPOAP1O95153 1857 aa35.18■■■■□ 3.22
CCDC78-208ENST00000471861 KDM4FA0A1W2PPD8 638 aa35.17■■■■□ 3.22
CCDC78-208ENST00000471861 PTPRGP23470 1445 aa35.1■■■■□ 3.21
CCDC78-208ENST00000471861 ABCC2Q92887 1545 aa35.04■■■■□ 3.2
CCDC78-208ENST00000471861 CARMIL1Q5VZK9 1371 aa35.02■■■■□ 3.2
CCDC78-208ENST00000471861 TNIKQ9UKE5 1360 aa35■■■■□ 3.19
CCDC78-208ENST00000471861 PPRC1Q5VV67 1664 aaKnown RBP35■■■■□ 3.19
CCDC78-208ENST00000471861 TTBK1Q5TCY1 1321 aaPredicted RBP34.99■■■■□ 3.19
CCDC78-208ENST00000471861 ASXL2Q76L83 1435 aa34.98■■■■□ 3.19
CCDC78-208ENST00000471861 IQGAP2Q13576 1575 aa34.96■■■■□ 3.19
CCDC78-208ENST00000471861 CARMIL2Q6F5E8 1435 aa34.96■■■■□ 3.19
CCDC78-208ENST00000471861 GLI2P10070 1586 aa34.95■■■■□ 3.18
CCDC78-208ENST00000471861 UHRF1BP1LA0JNW5 1464 aa34.91■■■■□ 3.18
CCDC78-208ENST00000471861 PLB1Q6P1J6 1458 aa34.91■■■■□ 3.18
CCDC78-208ENST00000471861 DISP1Q96F81 1524 aa34.89■■■■□ 3.18
CCDC78-208ENST00000471861 UACAQ9BZF9 1416 aa34.84■■■■□ 3.17
CCDC78-208ENST00000471861 COL17A1Q9UMD9 1497 aaPredicted RBP34.81■■■■□ 3.16
CCDC78-208ENST00000471861 EPRSP07814 1512 aaKnown RBP34.78■■■■□ 3.16
CCDC78-208ENST00000471861 KDM5BQ9UGL1 1544 aa34.78■■■■□ 3.16
CCDC78-208ENST00000471861 ADGRL1O94910 1474 aa34.78■■■■□ 3.16
CCDC78-208ENST00000471861 MAP3K4Q9Y6R4 1608 aa34.77■■■■□ 3.16
CCDC78-208ENST00000471861 UGGT2Q9NYU1 1516 aa34.74■■■■□ 3.15
CCDC78-208ENST00000471861 ZCCHC11Q5TAX3 1644 aaKnown RBP34.71■■■■□ 3.15
CCDC78-208ENST00000471861 KIAA0556O60303 1618 aa34.69■■■■□ 3.14
CCDC78-208ENST00000471861 RAPGEF2Q9Y4G8 1499 aa34.65■■■■□ 3.14
CCDC78-208ENST00000471861 TEX14Q8IWB6 1497 aa34.61■■■■□ 3.13
CCDC78-208ENST00000471861 ILDR1Q86SU0 546 aaPredicted RBP34.61■■■■□ 3.13
CCDC78-208ENST00000471861 WDR7Q9Y4E6 1490 aa34.55■■■■□ 3.12
CCDC78-208ENST00000471861 HECW2Q9P2P5 1572 aa34.49■■■■□ 3.11
CCDC78-208ENST00000471861 CTTNBP2Q8WZ74 1663 aa34.43■■■■□ 3.1
CCDC78-208ENST00000471861 ABCA8O94911 1581 aa34.4■■■■□ 3.1
CCDC78-208ENST00000471861 MAGI3Q5TCQ9 1506 aa34.39■■■■□ 3.1
CCDC78-208ENST00000471861 CFAP43Q8NDM7 1665 aa34.38■■■■□ 3.09
CCDC78-208ENST00000471861 CD109Q6YHK3 1445 aa34.35■■■■□ 3.09
CCDC78-208ENST00000471861 GOLGA3Q08378 1498 aa34.32■■■■□ 3.08
CCDC78-208ENST00000471861 KCNH8Q96L42 1107 aa34.25■■■■□ 3.07
CCDC78-208ENST00000471861 PRXQ9BXM0 1461 aa34.22■■■■□ 3.07
CCDC78-208ENST00000471861 KIF21BO75037 1637 aa34.22■■■■□ 3.07
CCDC78-208ENST00000471861 ARAP3Q8WWN8 1544 aa34.14■■■■□ 3.06
CCDC78-208ENST00000471861 ATP10BO94823 1461 aa34.08■■■■□ 3.05
CCDC78-208ENST00000471861 ARID3CA6NKF2 412 aa34.06■■■■□ 3.04
CCDC78-208ENST00000471861 ABCA9Q8IUA7 1624 aa34.04■■■■□ 3.04
CCDC78-208ENST00000471861 P3H3Q8IVL6 736 aa33.98■■■■□ 3.03
CCDC78-208ENST00000471861 ADAMTSL3P82987 1691 aa33.96■■■■□ 3.03
CCDC78-208ENST00000471861 SAMD9Q5K651 1589 aa33.96■■■■□ 3.03
CCDC78-208ENST00000471861 PTPRMP28827 1452 aa33.93■■■■□ 3.02
CCDC78-208ENST00000471861 FRMPD1Q5SYB0 1578 aa33.92■■■■□ 3.02
CCDC78-208ENST00000471861 PHLDB1Q86UU1 1377 aa33.91■■■■□ 3.02
CCDC78-208ENST00000471861 RAPGEF6Q8TEU7 1601 aa33.9■■■■□ 3.02
CCDC78-208ENST00000471861 RAPGEF3O95398 923 aa33.89■■■■□ 3.02
CCDC78-208ENST00000471861 NEO1Q92859 1461 aa33.88■■■■□ 3.01
CCDC78-208ENST00000471861 BCORL1Q5H9F3 1711 aa33.83■■■■□ 3.01
CCDC78-208ENST00000471861 NUP153P49790 1475 aaKnown RBP33.82■■■■□ 3
CCDC78-208ENST00000471861 MADDQ8WXG6 1647 aa33.8■■■■□ 3
CCDC78-208ENST00000471861 FAM9AQ8IZU1 332 aaPredicted RBP33.78■■■■□ 3
CCDC78-208ENST00000471861 FBXO41Q8TF61 875 aa33.77■■■■□ 3
CCDC78-208ENST00000471861 ARHGEF40Q8TER5 1519 aa33.73■■■□□ 2.99
CCDC78-208ENST00000471861 PCF11O94913 1555 aaKnown RBP33.72■■■□□ 2.99
CCDC78-208ENST00000471861 LMTK3Q96Q04 1460 aa33.71■■■□□ 2.99
CCDC78-208ENST00000471861 CSRNP3Q8WYN3 585 aa33.7■■■□□ 2.99
CCDC78-208ENST00000471861 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.69■■■□□ 2.98
CCDC78-208ENST00000471861 HNRNPUL2Q1KMD3 747 aaKnown RBP33.69■■■□□ 2.98
CCDC78-208ENST00000471861 FHOD3Q2V2M9 1422 aa33.69■■■□□ 2.98
CCDC78-208ENST00000471861 RICTORQ6R327 1708 aa33.67■■■□□ 2.98
CCDC78-208ENST00000471861 ARID4BQ4LE39 1312 aaPredicted RBP33.65■■■□□ 2.98
CCDC78-208ENST00000471861 RIMS1Q86UR5 1692 aaKnown RBP33.64■■■□□ 2.98
CCDC78-208ENST00000471861 DENND4BO75064 1496 aaPredicted RBP33.63■■■□□ 2.97
CCDC78-208ENST00000471861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.59■■■□□ 2.97
CCDC78-208ENST00000471861 AKNAQ7Z591 1439 aa33.59■■■□□ 2.97
CCDC78-208ENST00000471861 SIGLEC1Q9BZZ2 1709 aa33.59■■■□□ 2.97
CCDC78-208ENST00000471861 TTC37Q6PGP7 1564 aa33.58■■■□□ 2.97
CCDC78-208ENST00000471861 FANCAO15360 1455 aa33.57■■■□□ 2.97
CCDC78-208ENST00000471861 RANGAP1P46060 587 aaPredicted RBP33.56■■■□□ 2.96
CCDC78-208ENST00000471861 ZMYM4Q5VZL5 1548 aa33.56■■■□□ 2.96
CCDC78-208ENST00000471861 CFAP74Q9C0B2 1584 aa33.55■■■□□ 2.96
CCDC78-208ENST00000471861 PLEKHD1A6NEE1 506 aa33.51■■■□□ 2.95
CCDC78-208ENST00000471861 YEATS2Q9ULM3 1422 aa33.51■■■□□ 2.95
CCDC78-208ENST00000471861 ZFYVE16Q7Z3T8 1539 aa33.48■■■□□ 2.95
CCDC78-208ENST00000471861 EEA1Q15075 1411 aa33.47■■■□□ 2.95
CCDC78-208ENST00000471861 EFCAB5A4FU69 1503 aa33.45■■■□□ 2.95
CCDC78-208ENST00000471861 HSPA2P54652 639 aa33.44■■■□□ 2.94
CCDC78-208ENST00000471861 CDK13Q14004 1512 aaKnown RBP33.43■■■□□ 2.94
CCDC78-208ENST00000471861 HECW1Q76N89 1606 aa33.42■■■□□ 2.94
CCDC78-208ENST00000471861 POGZQ7Z3K3 1410 aa33.41■■■□□ 2.94
CCDC78-208ENST00000471861 MAGI2Q86UL8 1455 aa33.39■■■□□ 2.94
CCDC78-208ENST00000471861 PLPPR3Q6T4P5 718 aa33.37■■■□□ 2.93
CCDC78-208ENST00000471861 FER1L4A9Z1Z3 1794 aa33.34■■■□□ 2.93
CCDC78-208ENST00000471861 PLCH2O75038 1416 aa33.33■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms