RNA–Protein interactions for RNA: ENST00000471654.1

KLHL29-202, Transcript of kelch like family member 29, humanhuman

TSL 1 (best)

Gene KLHL29, Length 6,385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL29-202ENST00000471654 ANP32EQ9BTT0 268 aa17.57■□□□□ 0.4
KLHL29-202ENST00000471654 TONSLQ96HA7 1378 aa17.56■□□□□ 0.4
KLHL29-202ENST00000471654 FAM9BQ8IZU0 186 aa17.56■□□□□ 0.4
KLHL29-202ENST00000471654 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
KLHL29-202ENST00000471654 MYH16Q9H6N6 1097 aa17.54■□□□□ 0.4
KLHL29-202ENST00000471654 CHMP7Q8WUX9 453 aaPredicted RBP17.52■□□□□ 0.39
KLHL29-202ENST00000471654 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
KLHL29-202ENST00000471654 IRX6P78412 446 aaPredicted RBP17.49■□□□□ 0.39
KLHL29-202ENST00000471654 ZCCHC6Q5VYS8 1495 aaKnown RBP17.49■□□□□ 0.39
KLHL29-202ENST00000471654 TMC1Q8TDI8 760 aa17.48■□□□□ 0.39
KLHL29-202ENST00000471654 PPM1GO15355 546 aaPredicted RBP17.48■□□□□ 0.39
KLHL29-202ENST00000471654 TPRNQ4KMQ1 711 aa17.48■□□□□ 0.39
KLHL29-202ENST00000471654 GLIPR1L2Q4G1C9 344 aa17.47■□□□□ 0.39
KLHL29-202ENST00000471654 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.46■□□□□ 0.39
KLHL29-202ENST00000471654 TSPY4P0CV99 314 aa17.45■□□□□ 0.38
KLHL29-202ENST00000471654 TSPY10P0CW01 314 aa17.45■□□□□ 0.38
KLHL29-202ENST00000471654 CLSTN1O94985 981 aa17.45■□□□□ 0.38
KLHL29-202ENST00000471654 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
KLHL29-202ENST00000471654 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
KLHL29-202ENST00000471654 MRS2Q9HD23 443 aa17.36■□□□□ 0.37
KLHL29-202ENST00000471654 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
KLHL29-202ENST00000471654 HIRIP3Q9BW71 556 aaPredicted RBP17.35■□□□□ 0.37
KLHL29-202ENST00000471654 LAS1LQ9Y4W2 734 aaKnown RBP17.33■□□□□ 0.36
KLHL29-202ENST00000471654 MLECQ14165 292 aa17.31■□□□□ 0.36
KLHL29-202ENST00000471654 ZRSR1Q15695 479 aaKnown RBP17.31■□□□□ 0.36
KLHL29-202ENST00000471654 SUPT16HQ9Y5B9 1047 aaKnown RBP17.31■□□□□ 0.36
KLHL29-202ENST00000471654 NCLP19338 710 aaKnown RBP17.29■□□□□ 0.36
KLHL29-202ENST00000471654 RGL3Q3MIN7 710 aa17.28■□□□□ 0.36
KLHL29-202ENST00000471654 SOX12O15370 315 aa17.25■□□□□ 0.35
KLHL29-202ENST00000471654 NAP1L2Q9ULW6 460 aaPredicted RBP17.25■□□□□ 0.35
KLHL29-202ENST00000471654 CLIP1P30622 1438 aa17.25■□□□□ 0.35
KLHL29-202ENST00000471654 CCDC9Q9Y3X0 531 aaKnown RBP17.24■□□□□ 0.35
KLHL29-202ENST00000471654 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
KLHL29-202ENST00000471654 POGKQ9P215 609 aa17.22■□□□□ 0.35
KLHL29-202ENST00000471654 SENP3-EIF4A1A0A087X0R7 540 aa17.22■□□□□ 0.35
KLHL29-202ENST00000471654 DDRGK1Q96HY6 314 aa17.22■□□□□ 0.35
KLHL29-202ENST00000471654 OS9Q13438 667 aaPredicted RBP17.21■□□□□ 0.35
KLHL29-202ENST00000471654 PRM3Q9NNZ6 103 aa17.19■□□□□ 0.34
KLHL29-202ENST00000471654 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.18■□□□□ 0.34
KLHL29-202ENST00000471654 NEUROD2Q15784 382 aa17.16■□□□□ 0.34
KLHL29-202ENST00000471654 EIF4G2P78344 907 aaKnown RBP eCLIP17.16■□□□□ 0.34
KLHL29-202ENST00000471654 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
KLHL29-202ENST00000471654 FGD1P98174 961 aa17.15■□□□□ 0.34
KLHL29-202ENST00000471654 RRP7BPQ9NSQ0 103 aa17.15■□□□□ 0.34
KLHL29-202ENST00000471654 TNNT2P45379 298 aaPredicted RBP17.15■□□□□ 0.34
KLHL29-202ENST00000471654 ZNF330Q9Y3S2 320 aaPredicted RBP17.14■□□□□ 0.33
KLHL29-202ENST00000471654 GOLGA3Q08378 1498 aa17.14■□□□□ 0.33
KLHL29-202ENST00000471654 CASC1Q6TDU7 716 aa17.14■□□□□ 0.33
KLHL29-202ENST00000471654 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
KLHL29-202ENST00000471654 PLEKHD1A6NEE1 506 aa17.13■□□□□ 0.33
KLHL29-202ENST00000471654 NOP58Q9Y2X3 529 aaKnown RBP17.12■□□□□ 0.33
KLHL29-202ENST00000471654 TMX4Q9H1E5 349 aaPredicted RBP17.12■□□□□ 0.33
KLHL29-202ENST00000471654 MTUS2Q5JR59 1369 aa17.12■□□□□ 0.33
KLHL29-202ENST00000471654 RTN4Q9NQC3 1192 aaKnown RBP17.11■□□□□ 0.33
KLHL29-202ENST00000471654 PPP4R2Q9NY27 417 aa17.11■□□□□ 0.33
KLHL29-202ENST00000471654 AMER1Q5JTC6 1135 aaPredicted RBP17.09■□□□□ 0.33
KLHL29-202ENST00000471654 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
KLHL29-202ENST00000471654 MAPK8IP3Q9UPT6 1336 aa17.09■□□□□ 0.33
KLHL29-202ENST00000471654 BECN1Q14457 450 aa17.08■□□□□ 0.32
KLHL29-202ENST00000471654 KCNJ4P48050 445 aa17.07■□□□□ 0.32
KLHL29-202ENST00000471654 PTMAP06454 111 aaKnown RBP17.07■□□□□ 0.32
KLHL29-202ENST00000471654 EEA1Q15075 1411 aa17.06■□□□□ 0.32
KLHL29-202ENST00000471654 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
KLHL29-202ENST00000471654 PLCB2Q00722 1185 aa17.05■□□□□ 0.32
KLHL29-202ENST00000471654 RBM19Q9Y4C8 960 aaKnown RBP17.05■□□□□ 0.32
KLHL29-202ENST00000471654 TNIKQ9UKE5 1360 aa17.04■□□□□ 0.32
KLHL29-202ENST00000471654 RSF1Q96T23 1441 aaPredicted RBP17.04■□□□□ 0.32
KLHL29-202ENST00000471654 PAK3O75914 559 aaPredicted RBP17.04■□□□□ 0.32
KLHL29-202ENST00000471654 KRI1Q8N9T8 703 aaKnown RBP17.03■□□□□ 0.32
KLHL29-202ENST00000471654 TRIM44Q96DX7 344 aaPredicted RBP17.03■□□□□ 0.32
KLHL29-202ENST00000471654 G3V3G9 751 aa17.03■□□□□ 0.32
KLHL29-202ENST00000471654 DCAF8Q5TAQ9 597 aa17.03■□□□□ 0.32
KLHL29-202ENST00000471654 DEKP35659 375 aaKnown RBP17.03■□□□□ 0.32
KLHL29-202ENST00000471654 U2SURPO15042 1029 aaKnown RBP17.02■□□□□ 0.32
KLHL29-202ENST00000471654 GOLGA6L22H0YM25 854 aa17.02■□□□□ 0.32
KLHL29-202ENST00000471654 KNSTRNQ9Y448 316 aa17.02■□□□□ 0.32
KLHL29-202ENST00000471654 SAFB2Q14151 953 aaKnown RBP eCLIP17■□□□□ 0.31
KLHL29-202ENST00000471654 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
KLHL29-202ENST00000471654 DNTTIP2Q5QJE6 756 aaKnown RBP16.99■□□□□ 0.31
KLHL29-202ENST00000471654 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
KLHL29-202ENST00000471654 ERICH6BQ5W0A0 696 aa16.98■□□□□ 0.31
KLHL29-202ENST00000471654 NUDCQ9Y266 331 aa16.98■□□□□ 0.31
KLHL29-202ENST00000471654 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.31
KLHL29-202ENST00000471654 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
KLHL29-202ENST00000471654 FRAT1Q92837 279 aaPredicted RBP16.94■□□□□ 0.3
KLHL29-202ENST00000471654 PDE4CQ08493 712 aa16.94■□□□□ 0.3
KLHL29-202ENST00000471654 TSHZ2Q9NRE2 1034 aa16.94■□□□□ 0.3
KLHL29-202ENST00000471654 HDGFP51858 240 aaKnown RBP16.93■□□□□ 0.3
KLHL29-202ENST00000471654 NAP1L5Q96NT1 182 aaPredicted RBP16.93■□□□□ 0.3
KLHL29-202ENST00000471654 MSH5O43196 834 aa16.92■□□□□ 0.3
KLHL29-202ENST00000471654 CFDP1Q9UEE9 299 aaPredicted RBP16.92■□□□□ 0.3
KLHL29-202ENST00000471654 CDCA8Q53HL2 280 aa16.91■□□□□ 0.3
KLHL29-202ENST00000471654 SRPK2P78362 688 aaKnown RBP16.91■□□□□ 0.3
KLHL29-202ENST00000471654 ANO8Q9HCE9 1232 aaPredicted RBP16.91■□□□□ 0.3
KLHL29-202ENST00000471654 CEP164Q9UPV0 1460 aa16.9■□□□□ 0.3
KLHL29-202ENST00000471654 GNL2Q13823 731 aaKnown RBP16.89■□□□□ 0.3
KLHL29-202ENST00000471654 KLHL34Q8N239 644 aa16.89■□□□□ 0.3
KLHL29-202ENST00000471654 STK26Q9P289 416 aa16.89■□□□□ 0.29
KLHL29-202ENST00000471654 CCER2I3L3R5 266 aa16.88■□□□□ 0.29
KLHL29-202ENST00000471654 GOLGA6L6A8MZA4 724 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms