RNA–Protein interactions for RNA: ENST00000471427.1

POLR1A-206, Transcript of RNA polymerase I subunit A, humanhuman

TSL 2

Gene POLR1A, Length 290 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-206ENST00000471427 PRG4Q92954 1404 aaPredicted RBP16.49■□□□□ 0.23
POLR1A-206ENST00000471427 KIAA0586Q9BVV6 1533 aa16.47■□□□□ 0.23
POLR1A-206ENST00000471427 CUL7Q14999 1698 aa16.46■□□□□ 0.23
POLR1A-206ENST00000471427 RUSC2Q8N2Y8 1516 aa16.41■□□□□ 0.22
POLR1A-206ENST00000471427 RAPGEF2Q9Y4G8 1499 aa16.34■□□□□ 0.21
POLR1A-206ENST00000471427 NPM1P06748 294 aaKnown RBP eCLIP16.32■□□□□ 0.2
POLR1A-206ENST00000471427 CARMIL2Q6F5E8 1435 aa16.3■□□□□ 0.2
POLR1A-206ENST00000471427 PTPRGP23470 1445 aa16.29■□□□□ 0.2
POLR1A-206ENST00000471427 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
POLR1A-206ENST00000471427 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
POLR1A-206ENST00000471427 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
POLR1A-206ENST00000471427 UGGT2Q9NYU1 1516 aa16.22■□□□□ 0.19
POLR1A-206ENST00000471427 MAPKBP1O60336 1514 aa16.21■□□□□ 0.19
POLR1A-206ENST00000471427 DISP1Q96F81 1524 aa16.21■□□□□ 0.19
POLR1A-206ENST00000471427 CSRNP3Q8WYN3 585 aa16.21■□□□□ 0.19
POLR1A-206ENST00000471427 ADCY10Q96PN6 1610 aa16.2■□□□□ 0.18
POLR1A-206ENST00000471427 FAM69CQ0P6D2 419 aa16.2■□□□□ 0.18
POLR1A-206ENST00000471427 ABCC10Q5T3U5 1492 aa16.2■□□□□ 0.18
POLR1A-206ENST00000471427 UHRF1BP1LA0JNW5 1464 aa16.17■□□□□ 0.18
POLR1A-206ENST00000471427 UACAQ9BZF9 1416 aa16.16■□□□□ 0.18
POLR1A-206ENST00000471427 TTBK1Q5TCY1 1321 aaPredicted RBP16.15■□□□□ 0.18
POLR1A-206ENST00000471427 ABCC2Q92887 1545 aa16.14■□□□□ 0.18
POLR1A-206ENST00000471427 EEA1Q15075 1411 aa16.14■□□□□ 0.17
POLR1A-206ENST00000471427 GOLGA3Q08378 1498 aa16.12■□□□□ 0.17
POLR1A-206ENST00000471427 KIF13AQ9H1H9 1805 aa16.12■□□□□ 0.17
POLR1A-206ENST00000471427 PLB1Q6P1J6 1458 aa16.1■□□□□ 0.17
POLR1A-206ENST00000471427 KIAA0556O60303 1618 aa16.09■□□□□ 0.17
POLR1A-206ENST00000471427 KDM5BQ9UGL1 1544 aa16.08■□□□□ 0.16
POLR1A-206ENST00000471427 DIP2BQ9P265 1576 aa16.08■□□□□ 0.16
POLR1A-206ENST00000471427 ASXL2Q76L83 1435 aa16.07■□□□□ 0.16
POLR1A-206ENST00000471427 CTTNBP2Q8WZ74 1663 aa16.06■□□□□ 0.16
POLR1A-206ENST00000471427 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
POLR1A-206ENST00000471427 FAM9AQ8IZU1 332 aaPredicted RBP16.06■□□□□ 0.16
POLR1A-206ENST00000471427 GLI2P10070 1586 aa16.01■□□□□ 0.15
POLR1A-206ENST00000471427 ABCA8O94911 1581 aa15.98■□□□□ 0.15
POLR1A-206ENST00000471427 EPRSP07814 1512 aaKnown RBP15.97■□□□□ 0.15
POLR1A-206ENST00000471427 P3H3Q8IVL6 736 aa15.96■□□□□ 0.15
POLR1A-206ENST00000471427 ZCCHC11Q5TAX3 1644 aaKnown RBP15.94■□□□□ 0.14
POLR1A-206ENST00000471427 WDR7Q9Y4E6 1490 aa15.93■□□□□ 0.14
POLR1A-206ENST00000471427 SAMD9Q5K651 1589 aa15.92■□□□□ 0.14
POLR1A-206ENST00000471427 KIF21BO75037 1637 aa15.9■□□□□ 0.14
POLR1A-206ENST00000471427 TSPOAP1O95153 1857 aa15.9■□□□□ 0.14
POLR1A-206ENST00000471427 ATP10BO94823 1461 aa15.9■□□□□ 0.14
POLR1A-206ENST00000471427 AEBP2Q6ZN18 517 aaPredicted RBP15.89■□□□□ 0.13
POLR1A-206ENST00000471427 KCNH8Q96L42 1107 aa15.89■□□□□ 0.13
POLR1A-206ENST00000471427 KDM6BO15054 1643 aa15.87■□□□□ 0.13
POLR1A-206ENST00000471427 TEX14Q8IWB6 1497 aa15.86■□□□□ 0.13
POLR1A-206ENST00000471427 UBTFP17480 764 aaKnown RBP15.86■□□□□ 0.13
POLR1A-206ENST00000471427 MAP3K4Q9Y6R4 1608 aa15.86■□□□□ 0.13
POLR1A-206ENST00000471427 PPRC1Q5VV67 1664 aaKnown RBP15.86■□□□□ 0.13
POLR1A-206ENST00000471427 CD109Q6YHK3 1445 aa15.85■□□□□ 0.13
POLR1A-206ENST00000471427 RANGAP1P46060 587 aaPredicted RBP15.84■□□□□ 0.13
POLR1A-206ENST00000471427 MAGI3Q5TCQ9 1506 aa15.84■□□□□ 0.13
POLR1A-206ENST00000471427 COL17A1Q9UMD9 1497 aaPredicted RBP15.83■□□□□ 0.12
POLR1A-206ENST00000471427 EFCAB5A4FU69 1503 aa15.82■□□□□ 0.12
POLR1A-206ENST00000471427 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
POLR1A-206ENST00000471427 RAPGEF6Q8TEU7 1601 aa15.8■□□□□ 0.12
POLR1A-206ENST00000471427 ARID3CA6NKF2 412 aa15.8■□□□□ 0.12
POLR1A-206ENST00000471427 NUP153P49790 1475 aaKnown RBP15.79■□□□□ 0.12
POLR1A-206ENST00000471427 PLEKHD1A6NEE1 506 aa15.79■□□□□ 0.12
POLR1A-206ENST00000471427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
POLR1A-206ENST00000471427 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
POLR1A-206ENST00000471427 PHLDB1Q86UU1 1377 aa15.78■□□□□ 0.12
POLR1A-206ENST00000471427 CFAP43Q8NDM7 1665 aa15.77■□□□□ 0.12
POLR1A-206ENST00000471427 KDM4FA0A1W2PPD8 638 aa15.76■□□□□ 0.11
POLR1A-206ENST00000471427 EHMT2Q96KQ7 1210 aa15.73■□□□□ 0.11
POLR1A-206ENST00000471427 FMN1Q68DA7 1419 aa15.72■□□□□ 0.11
POLR1A-206ENST00000471427 ABCA9Q8IUA7 1624 aa15.72■□□□□ 0.11
POLR1A-206ENST00000471427 ARHGAP35Q9NRY4 1499 aa15.71■□□□□ 0.11
POLR1A-206ENST00000471427 ARAP3Q8WWN8 1544 aa15.71■□□□□ 0.11
POLR1A-206ENST00000471427 NEO1Q92859 1461 aa15.67■□□□□ 0.1
POLR1A-206ENST00000471427 CDK11AQ9UQ88 783 aaPredicted RBP15.67■□□□□ 0.1
POLR1A-206ENST00000471427 ATP1B4Q9UN42 357 aaPredicted RBP15.63■□□□□ 0.09
POLR1A-206ENST00000471427 RAPGEF3O95398 923 aa15.62■□□□□ 0.09
POLR1A-206ENST00000471427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.6■□□□□ 0.09
POLR1A-206ENST00000471427 CDK13Q14004 1512 aaKnown RBP15.59■□□□□ 0.09
POLR1A-206ENST00000471427 AKNAQ7Z591 1439 aa15.59■□□□□ 0.09
POLR1A-206ENST00000471427 ADGRL1O94910 1474 aa15.59■□□□□ 0.09
POLR1A-206ENST00000471427 HECW1Q76N89 1606 aa15.58■□□□□ 0.09
POLR1A-206ENST00000471427 PLCH2O75038 1416 aa15.58■□□□□ 0.08
POLR1A-206ENST00000471427 CASKIN1Q8WXD9 1431 aa15.57■□□□□ 0.08
POLR1A-206ENST00000471427 FANCAO15360 1455 aa15.56■□□□□ 0.08
POLR1A-206ENST00000471427 DENND4BO75064 1496 aaPredicted RBP15.55■□□□□ 0.08
POLR1A-206ENST00000471427 TROQ12816 1431 aaPredicted RBP15.55■□□□□ 0.08
POLR1A-206ENST00000471427 EFCAB2Q5VUJ9 269 aa15.55■□□□□ 0.08
POLR1A-206ENST00000471427 CLIP1P30622 1438 aa15.54■□□□□ 0.08
POLR1A-206ENST00000471427 TTC37Q6PGP7 1564 aa15.51■□□□□ 0.07
POLR1A-206ENST00000471427 CCDC18Q5T9S5 1454 aa15.51■□□□□ 0.07
POLR1A-206ENST00000471427 CFAP74Q9C0B2 1584 aa15.5■□□□□ 0.07
POLR1A-206ENST00000471427 SCAPERQ9BY12 1400 aa15.49■□□□□ 0.07
POLR1A-206ENST00000471427 MAGI2Q86UL8 1455 aa15.48■□□□□ 0.07
POLR1A-206ENST00000471427 FRMPD1Q5SYB0 1578 aa15.48■□□□□ 0.07
POLR1A-206ENST00000471427 FYCO1Q9BQS8 1478 aa15.47■□□□□ 0.07
POLR1A-206ENST00000471427 RICTORQ6R327 1708 aa15.45■□□□□ 0.06
POLR1A-206ENST00000471427 ZMYM4Q5VZL5 1548 aa15.44■□□□□ 0.06
POLR1A-206ENST00000471427 KIF14Q15058 1648 aa15.44■□□□□ 0.06
POLR1A-206ENST00000471427 LRRIQ1Q96JM4 1722 aa15.44■□□□□ 0.06
POLR1A-206ENST00000471427 PCF11O94913 1555 aaKnown RBP15.44■□□□□ 0.06
POLR1A-206ENST00000471427 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
POLR1A-206ENST00000471427 ARID4BQ4LE39 1312 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms