RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 PRG4Q92954 1404 aaPredicted RBP15.07■□□□□ 0
PTPRE-207ENST00000471218 ERCC6L2Q5T890 1561 aa15.04■□□□□ -0
PTPRE-207ENST00000471218 FAM69CQ0P6D2 419 aa15□□□□□ -0.01
PTPRE-207ENST00000471218 ABCC10Q5T3U5 1492 aa14.96□□□□□ -0.01
PTPRE-207ENST00000471218 KIF27Q86VH2 1401 aa14.94□□□□□ -0.02
PTPRE-207ENST00000471218 MAPKBP1O60336 1514 aa14.94□□□□□ -0.02
PTPRE-207ENST00000471218 KIAA0586Q9BVV6 1533 aa14.94□□□□□ -0.02
PTPRE-207ENST00000471218 IGF1RP08069 1367 aa14.91□□□□□ -0.02
PTPRE-207ENST00000471218 KIF13AQ9H1H9 1805 aa14.9□□□□□ -0.02
PTPRE-207ENST00000471218 RUSC2Q8N2Y8 1516 aa14.9□□□□□ -0.02
PTPRE-207ENST00000471218 CARMIL2Q6F5E8 1435 aa14.88□□□□□ -0.03
PTPRE-207ENST00000471218 PTPRGP23470 1445 aa14.87□□□□□ -0.03
PTPRE-207ENST00000471218 CUL7Q14999 1698 aa14.86□□□□□ -0.03
PTPRE-207ENST00000471218 CARMIL1Q5VZK9 1371 aa14.84□□□□□ -0.03
PTPRE-207ENST00000471218 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.04
PTPRE-207ENST00000471218 DIP2BQ9P265 1576 aa14.82□□□□□ -0.04
PTPRE-207ENST00000471218 CSRNP3Q8WYN3 585 aa14.82□□□□□ -0.04
PTPRE-207ENST00000471218 ADCY10Q96PN6 1610 aa14.81□□□□□ -0.04
PTPRE-207ENST00000471218 KDM6BO15054 1643 aa14.79□□□□□ -0.04
PTPRE-207ENST00000471218 PLB1Q6P1J6 1458 aa14.79□□□□□ -0.04
PTPRE-207ENST00000471218 KIF21BO75037 1637 aa14.78□□□□□ -0.04
PTPRE-207ENST00000471218 ABCC2Q92887 1545 aa14.76□□□□□ -0.05
PTPRE-207ENST00000471218 GOLGA3Q08378 1498 aa14.75□□□□□ -0.05
PTPRE-207ENST00000471218 KDM4FA0A1W2PPD8 638 aa14.74□□□□□ -0.05
PTPRE-207ENST00000471218 UHRF1BP1LA0JNW5 1464 aa14.74□□□□□ -0.05
PTPRE-207ENST00000471218 TTBK1Q5TCY1 1321 aaPredicted RBP14.73□□□□□ -0.05
PTPRE-207ENST00000471218 FAM9AQ8IZU1 332 aaPredicted RBP14.73□□□□□ -0.05
PTPRE-207ENST00000471218 PRXQ9BXM0 1461 aa14.73□□□□□ -0.05
PTPRE-207ENST00000471218 UACAQ9BZF9 1416 aa14.73□□□□□ -0.05
PTPRE-207ENST00000471218 ASXL2Q76L83 1435 aa14.72□□□□□ -0.05
PTPRE-207ENST00000471218 GLI2P10070 1586 aa14.71□□□□□ -0.05
PTPRE-207ENST00000471218 IQGAP2Q13576 1575 aa14.71□□□□□ -0.05
PTPRE-207ENST00000471218 TSPOAP1O95153 1857 aa14.69□□□□□ -0.06
PTPRE-207ENST00000471218 TEX14Q8IWB6 1497 aa14.68□□□□□ -0.06
PTPRE-207ENST00000471218 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
PTPRE-207ENST00000471218 LOC105371045A0A1W2PR82 267 aa14.66□□□□□ -0.06
PTPRE-207ENST00000471218 KDM5BQ9UGL1 1544 aa14.65□□□□□ -0.06
PTPRE-207ENST00000471218 UGGT2Q9NYU1 1516 aa14.63□□□□□ -0.07
PTPRE-207ENST00000471218 DISP1Q96F81 1524 aa14.62□□□□□ -0.07
PTPRE-207ENST00000471218 EPRSP07814 1512 aaKnown RBP14.61□□□□□ -0.07
PTPRE-207ENST00000471218 WDR7Q9Y4E6 1490 aa14.56□□□□□ -0.08
PTPRE-207ENST00000471218 MAP3K4Q9Y6R4 1608 aa14.55□□□□□ -0.08
PTPRE-207ENST00000471218 CEP162Q5TB80 1403 aa14.55□□□□□ -0.08
PTPRE-207ENST00000471218 ADGRL1O94910 1474 aa14.55□□□□□ -0.08
PTPRE-207ENST00000471218 KIAA0556O60303 1618 aa14.54□□□□□ -0.08
PTPRE-207ENST00000471218 PPRC1Q5VV67 1664 aaKnown RBP14.54□□□□□ -0.08
PTPRE-207ENST00000471218 CD109Q6YHK3 1445 aa14.53□□□□□ -0.08
PTPRE-207ENST00000471218 UBTFP17480 764 aaKnown RBP14.53□□□□□ -0.08
PTPRE-207ENST00000471218 ZCCHC11Q5TAX3 1644 aaKnown RBP14.52□□□□□ -0.08
PTPRE-207ENST00000471218 MAGI3Q5TCQ9 1506 aa14.51□□□□□ -0.09
PTPRE-207ENST00000471218 COL17A1Q9UMD9 1497 aaPredicted RBP14.51□□□□□ -0.09
PTPRE-207ENST00000471218 KCNH8Q96L42 1107 aa14.51□□□□□ -0.09
PTPRE-207ENST00000471218 PHLDB1Q86UU1 1377 aa14.5□□□□□ -0.09
PTPRE-207ENST00000471218 ILDR1Q86SU0 546 aaPredicted RBP14.49□□□□□ -0.09
PTPRE-207ENST00000471218 CLIP1P30622 1438 aa14.47□□□□□ -0.09
PTPRE-207ENST00000471218 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.1
PTPRE-207ENST00000471218 ABCA8O94911 1581 aa14.43□□□□□ -0.1
PTPRE-207ENST00000471218 CTTNBP2Q8WZ74 1663 aa14.43□□□□□ -0.1
PTPRE-207ENST00000471218 ARAP3Q8WWN8 1544 aa14.41□□□□□ -0.1
PTPRE-207ENST00000471218 EFCAB5A4FU69 1503 aa14.4□□□□□ -0.1
PTPRE-207ENST00000471218 HECW2Q9P2P5 1572 aa14.38□□□□□ -0.11
PTPRE-207ENST00000471218 VPS8Q8N3P4 1428 aa14.37□□□□□ -0.11
PTPRE-207ENST00000471218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
PTPRE-207ENST00000471218 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
PTPRE-207ENST00000471218 ATP10BO94823 1461 aa14.35□□□□□ -0.11
PTPRE-207ENST00000471218 NEO1Q92859 1461 aa14.34□□□□□ -0.11
PTPRE-207ENST00000471218 PLEKHD1A6NEE1 506 aa14.33□□□□□ -0.12
PTPRE-207ENST00000471218 P3H3Q8IVL6 736 aa14.33□□□□□ -0.12
PTPRE-207ENST00000471218 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
PTPRE-207ENST00000471218 ARHGAP35Q9NRY4 1499 aa14.31□□□□□ -0.12
PTPRE-207ENST00000471218 ARID4BQ4LE39 1312 aaPredicted RBP14.3□□□□□ -0.12
PTPRE-207ENST00000471218 ABCA9Q8IUA7 1624 aa14.3□□□□□ -0.12
PTPRE-207ENST00000471218 ARID3CA6NKF2 412 aa14.29□□□□□ -0.12
PTPRE-207ENST00000471218 FBXO41Q8TF61 875 aa14.29□□□□□ -0.12
PTPRE-207ENST00000471218 RAPGEF3O95398 923 aa14.28□□□□□ -0.12
PTPRE-207ENST00000471218 SAMD9Q5K651 1589 aa14.26□□□□□ -0.13
PTPRE-207ENST00000471218 MAP3K1Q13233 1512 aa14.25□□□□□ -0.13
PTPRE-207ENST00000471218 PTPRMP28827 1452 aa14.25□□□□□ -0.13
PTPRE-207ENST00000471218 FMN1Q68DA7 1419 aa14.24□□□□□ -0.13
PTPRE-207ENST00000471218 POGZQ7Z3K3 1410 aa14.24□□□□□ -0.13
PTPRE-207ENST00000471218 RAPGEF6Q8TEU7 1601 aa14.24□□□□□ -0.13
PTPRE-207ENST00000471218 DENND4BO75064 1496 aaPredicted RBP14.22□□□□□ -0.13
PTPRE-207ENST00000471218 ADAMTSL3P82987 1691 aa14.2□□□□□ -0.14
PTPRE-207ENST00000471218 CDK11AQ9UQ88 783 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-207ENST00000471218 NUP153P49790 1475 aaKnown RBP14.19□□□□□ -0.14
PTPRE-207ENST00000471218 FYCO1Q9BQS8 1478 aa14.19□□□□□ -0.14
PTPRE-207ENST00000471218 FHOD3Q2V2M9 1422 aa14.19□□□□□ -0.14
PTPRE-207ENST00000471218 AKNAQ7Z591 1439 aa14.19□□□□□ -0.14
PTPRE-207ENST00000471218 MAGI2Q86UL8 1455 aa14.18□□□□□ -0.14
PTPRE-207ENST00000471218 CFAP74Q9C0B2 1584 aa14.18□□□□□ -0.14
PTPRE-207ENST00000471218 FANCAO15360 1455 aa14.18□□□□□ -0.14
PTPRE-207ENST00000471218 CASKIN1Q8WXD9 1431 aa14.17□□□□□ -0.14
PTPRE-207ENST00000471218 APLP2Q06481 763 aa14.17□□□□□ -0.14
PTPRE-207ENST00000471218 TRIM26Q12899 539 aaPredicted RBP14.17□□□□□ -0.14
PTPRE-207ENST00000471218 BCORL1Q5H9F3 1711 aa14.16□□□□□ -0.14
PTPRE-207ENST00000471218 RANGAP1P46060 587 aaPredicted RBP14.16□□□□□ -0.14
PTPRE-207ENST00000471218 PCF11O94913 1555 aaKnown RBP14.14□□□□□ -0.15
PTPRE-207ENST00000471218 EFCAB2Q5VUJ9 269 aa14.13□□□□□ -0.15
PTPRE-207ENST00000471218 ARHGEF40Q8TER5 1519 aa14.12□□□□□ -0.15
PTPRE-207ENST00000471218 FRMPD1Q5SYB0 1578 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms