RNA–Protein interactions for RNA: ENST00000470819.2

CDKN2A-204, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-204ENST00000470819 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
CDKN2A-204ENST00000470819 PRG4Q92954 1404 aaPredicted RBP24.74■■□□□ 1.55
CDKN2A-204ENST00000470819 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
CDKN2A-204ENST00000470819 CARMIL1Q5VZK9 1371 aa24.59■■□□□ 1.53
CDKN2A-204ENST00000470819 KIAA0586Q9BVV6 1533 aa24.58■■□□□ 1.53
CDKN2A-204ENST00000470819 CUL7Q14999 1698 aa24.55■■□□□ 1.52
CDKN2A-204ENST00000470819 NPM1P06748 294 aaKnown RBP eCLIP24.46■■□□□ 1.51
CDKN2A-204ENST00000470819 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
CDKN2A-204ENST00000470819 PTPRGP23470 1445 aa24.37■■□□□ 1.49
CDKN2A-204ENST00000470819 FAM69CQ0P6D2 419 aa24.37■■□□□ 1.49
CDKN2A-204ENST00000470819 ADCY10Q96PN6 1610 aa24.35■■□□□ 1.49
CDKN2A-204ENST00000470819 CARMIL2Q6F5E8 1435 aa24.34■■□□□ 1.49
CDKN2A-204ENST00000470819 RAPGEF2Q9Y4G8 1499 aa24.33■■□□□ 1.49
CDKN2A-204ENST00000470819 TNIKQ9UKE5 1360 aa24.32■■□□□ 1.48
CDKN2A-204ENST00000470819 IQGAP2Q13576 1575 aa24.31■■□□□ 1.48
CDKN2A-204ENST00000470819 ABCC10Q5T3U5 1492 aa24.31■■□□□ 1.48
CDKN2A-204ENST00000470819 MAPKBP1O60336 1514 aa24.3■■□□□ 1.48
CDKN2A-204ENST00000470819 KIF13AQ9H1H9 1805 aa24.27■■□□□ 1.48
CDKN2A-204ENST00000470819 DISP1Q96F81 1524 aa24.24■■□□□ 1.47
CDKN2A-204ENST00000470819 DIP2BQ9P265 1576 aa24.19■■□□□ 1.46
CDKN2A-204ENST00000470819 ABCC2Q92887 1545 aa24.18■■□□□ 1.46
CDKN2A-204ENST00000470819 UGGT2Q9NYU1 1516 aa24.18■■□□□ 1.46
CDKN2A-204ENST00000470819 UACAQ9BZF9 1416 aa24.17■■□□□ 1.46
CDKN2A-204ENST00000470819 UHRF1BP1LA0JNW5 1464 aa24.14■■□□□ 1.46
CDKN2A-204ENST00000470819 PRXQ9BXM0 1461 aa24.12■■□□□ 1.45
CDKN2A-204ENST00000470819 ASXL2Q76L83 1435 aa24.1■■□□□ 1.45
CDKN2A-204ENST00000470819 KIAA0556O60303 1618 aa24.08■■□□□ 1.45
CDKN2A-204ENST00000470819 PLB1Q6P1J6 1458 aa24.07■■□□□ 1.44
CDKN2A-204ENST00000470819 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
CDKN2A-204ENST00000470819 KDM5BQ9UGL1 1544 aa24.03■■□□□ 1.44
CDKN2A-204ENST00000470819 GOLGA3Q08378 1498 aa24■■□□□ 1.43
CDKN2A-204ENST00000470819 CTTNBP2Q8WZ74 1663 aa23.99■■□□□ 1.43
CDKN2A-204ENST00000470819 TSPOAP1O95153 1857 aa23.98■■□□□ 1.43
CDKN2A-204ENST00000470819 GLI2P10070 1586 aa23.96■■□□□ 1.43
CDKN2A-204ENST00000470819 KDM6BO15054 1643 aa23.95■■□□□ 1.43
CDKN2A-204ENST00000470819 P3H3Q8IVL6 736 aa23.95■■□□□ 1.42
CDKN2A-204ENST00000470819 EPRSP07814 1512 aaKnown RBP23.94■■□□□ 1.42
CDKN2A-204ENST00000470819 ZCCHC11Q5TAX3 1644 aaKnown RBP23.92■■□□□ 1.42
CDKN2A-204ENST00000470819 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
CDKN2A-204ENST00000470819 ABCA8O94911 1581 aa23.87■■□□□ 1.41
CDKN2A-204ENST00000470819 KCNH8Q96L42 1107 aa23.87■■□□□ 1.41
CDKN2A-204ENST00000470819 WDR7Q9Y4E6 1490 aa23.87■■□□□ 1.41
CDKN2A-204ENST00000470819 ARID3CA6NKF2 412 aa23.85■■□□□ 1.41
CDKN2A-204ENST00000470819 PPRC1Q5VV67 1664 aaKnown RBP23.85■■□□□ 1.41
CDKN2A-204ENST00000470819 EEA1Q15075 1411 aa23.84■■□□□ 1.41
CDKN2A-204ENST00000470819 RANGAP1P46060 587 aaPredicted RBP23.83■■□□□ 1.41
CDKN2A-204ENST00000470819 COL17A1Q9UMD9 1497 aaPredicted RBP23.81■■□□□ 1.4
CDKN2A-204ENST00000470819 KDM4FA0A1W2PPD8 638 aa23.81■■□□□ 1.4
CDKN2A-204ENST00000470819 MAP3K4Q9Y6R4 1608 aa23.81■■□□□ 1.4
CDKN2A-204ENST00000470819 TEX14Q8IWB6 1497 aa23.78■■□□□ 1.4
CDKN2A-204ENST00000470819 CD109Q6YHK3 1445 aa23.75■■□□□ 1.39
CDKN2A-204ENST00000470819 ATP10BO94823 1461 aa23.75■■□□□ 1.39
CDKN2A-204ENST00000470819 SAMD9Q5K651 1589 aa23.72■■□□□ 1.39
CDKN2A-204ENST00000470819 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
CDKN2A-204ENST00000470819 HNRNPUL2Q1KMD3 747 aaKnown RBP23.68■■□□□ 1.38
CDKN2A-204ENST00000470819 MAGI3Q5TCQ9 1506 aa23.68■■□□□ 1.38
CDKN2A-204ENST00000470819 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
CDKN2A-204ENST00000470819 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
CDKN2A-204ENST00000470819 CFAP43Q8NDM7 1665 aa23.62■■□□□ 1.37
CDKN2A-204ENST00000470819 RAPGEF6Q8TEU7 1601 aa23.62■■□□□ 1.37
CDKN2A-204ENST00000470819 KIF21BO75037 1637 aa23.61■■□□□ 1.37
CDKN2A-204ENST00000470819 NUP153P49790 1475 aaKnown RBP23.6■■□□□ 1.37
CDKN2A-204ENST00000470819 UBTFP17480 764 aaKnown RBP23.59■■□□□ 1.37
CDKN2A-204ENST00000470819 ADGRL1O94910 1474 aa23.56■■□□□ 1.36
CDKN2A-204ENST00000470819 PLEKHD1A6NEE1 506 aa23.53■■□□□ 1.36
CDKN2A-204ENST00000470819 EFCAB5A4FU69 1503 aa23.51■■□□□ 1.35
CDKN2A-204ENST00000470819 ABCA9Q8IUA7 1624 aa23.5■■□□□ 1.35
CDKN2A-204ENST00000470819 ARAP3Q8WWN8 1544 aa23.49■■□□□ 1.35
CDKN2A-204ENST00000470819 PHLDB1Q86UU1 1377 aa23.47■■□□□ 1.35
CDKN2A-204ENST00000470819 RAPGEF3O95398 923 aa23.46■■□□□ 1.35
CDKN2A-204ENST00000470819 ATP1B4Q9UN42 357 aaPredicted RBP23.43■■□□□ 1.34
CDKN2A-204ENST00000470819 NEO1Q92859 1461 aa23.42■■□□□ 1.34
CDKN2A-204ENST00000470819 ARHGAP35Q9NRY4 1499 aa23.39■■□□□ 1.34
CDKN2A-204ENST00000470819 CDK13Q14004 1512 aaKnown RBP23.37■■□□□ 1.33
CDKN2A-204ENST00000470819 FMN1Q68DA7 1419 aa23.36■■□□□ 1.33
CDKN2A-204ENST00000470819 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.33
CDKN2A-204ENST00000470819 AKNAQ7Z591 1439 aa23.32■■□□□ 1.32
CDKN2A-204ENST00000470819 FANCAO15360 1455 aa23.3■■□□□ 1.32
CDKN2A-204ENST00000470819 CDK11AQ9UQ88 783 aaPredicted RBP23.28■■□□□ 1.32
CDKN2A-204ENST00000470819 DENND4BO75064 1496 aaPredicted RBP23.28■■□□□ 1.32
CDKN2A-204ENST00000470819 TTC37Q6PGP7 1564 aa23.27■■□□□ 1.32
CDKN2A-204ENST00000470819 FRMPD1Q5SYB0 1578 aa23.27■■□□□ 1.32
CDKN2A-204ENST00000470819 ARID4BQ4LE39 1312 aaPredicted RBP23.25■■□□□ 1.31
CDKN2A-204ENST00000470819 HECW1Q76N89 1606 aa23.25■■□□□ 1.31
CDKN2A-204ENST00000470819 PLCH2O75038 1416 aa23.24■■□□□ 1.31
CDKN2A-204ENST00000470819 SCAPERQ9BY12 1400 aa23.18■■□□□ 1.3
CDKN2A-204ENST00000470819 EFCAB2Q5VUJ9 269 aa23.18■■□□□ 1.3
CDKN2A-204ENST00000470819 TROQ12816 1431 aaPredicted RBP23.17■■□□□ 1.3
CDKN2A-204ENST00000470819 CFAP74Q9C0B2 1584 aa23.17■■□□□ 1.3
CDKN2A-204ENST00000470819 HECW2Q9P2P5 1572 aa23.17■■□□□ 1.3
CDKN2A-204ENST00000470819 RICTORQ6R327 1708 aa23.14■■□□□ 1.3
CDKN2A-204ENST00000470819 YEATS2Q9ULM3 1422 aa23.14■■□□□ 1.29
CDKN2A-204ENST00000470819 PTPRMP28827 1452 aa23.13■■□□□ 1.29
CDKN2A-204ENST00000470819 CASKIN1Q8WXD9 1431 aa23.13■■□□□ 1.29
CDKN2A-204ENST00000470819 ADAMTSL3P82987 1691 aa23.13■■□□□ 1.29
CDKN2A-204ENST00000470819 KIF14Q15058 1648 aa23.12■■□□□ 1.29
CDKN2A-204ENST00000470819 CLIP1P30622 1438 aa23.12■■□□□ 1.29
CDKN2A-204ENST00000470819 ARHGEF40Q8TER5 1519 aa23.12■■□□□ 1.29
CDKN2A-204ENST00000470819 POGZQ7Z3K3 1410 aa23.1■■□□□ 1.29
CDKN2A-204ENST00000470819 ZMYM4Q5VZL5 1548 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms