RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 BAZ1AQ9NRL2 1556 aaPredicted RBP9.32□□□□□ -0.92
ITGA6-208ENST00000469534 RSF1Q96T23 1441 aaPredicted RBP9.31□□□□□ -0.92
ITGA6-208ENST00000469534 EIF4G1Q04637 1599 aaKnown RBP9.3□□□□□ -0.92
ITGA6-208ENST00000469534 CLCN6P51797 869 aa9.3□□□□□ -0.92
ITGA6-208ENST00000469534 LHX8Q68G74 356 aa9.3□□□□□ -0.92
ITGA6-208ENST00000469534 POTEIP0CG38 1075 aa9.25□□□□□ -0.93
ITGA6-208ENST00000469534 ZNF579Q8NAF0 562 aaKnown RBP9.24□□□□□ -0.93
ITGA6-208ENST00000469534 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
ITGA6-208ENST00000469534 CC2D2AQ9P2K1 1620 aa9.23□□□□□ -0.93
ITGA6-208ENST00000469534 MNX1P50219 401 aaPredicted RBP9.21□□□□□ -0.94
ITGA6-208ENST00000469534 DCBLD2Q96PD2 775 aa9.2□□□□□ -0.94
ITGA6-208ENST00000469534 ATAD2BQ9ULI0 1458 aa9.19□□□□□ -0.94
ITGA6-208ENST00000469534 SMARCA2P51531 1590 aa9.16□□□□□ -0.94
ITGA6-208ENST00000469534 TOP2AP11388 1531 aaKnown RBP9.15□□□□□ -0.94
ITGA6-208ENST00000469534 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.94
ITGA6-208ENST00000469534 PAK3O75914 559 aaPredicted RBP9.15□□□□□ -0.94
ITGA6-208ENST00000469534 PEG3Q9GZU2 1588 aa9.15□□□□□ -0.95
ITGA6-208ENST00000469534 GALR2O43603 387 aaPredicted RBP9.13□□□□□ -0.95
ITGA6-208ENST00000469534 NPM1P06748 294 aaKnown RBP eCLIP9.12□□□□□ -0.95
ITGA6-208ENST00000469534 FKBP8Q14318 412 aa9.1□□□□□ -0.95
ITGA6-208ENST00000469534 PHF12Q96QT6 1004 aa9.09□□□□□ -0.95
ITGA6-208ENST00000469534 NCAPD3P42695 1498 aa9.08□□□□□ -0.96
ITGA6-208ENST00000469534 HMGXB3Q12766 1538 aa9.08□□□□□ -0.96
ITGA6-208ENST00000469534 CCDC88BA6NC98 1476 aa9.08□□□□□ -0.96
ITGA6-208ENST00000469534 MIER1Q8N108 512 aa9.03□□□□□ -0.96
ITGA6-208ENST00000469534 PLEKHG5O94827 1062 aa8.97□□□□□ -0.97
ITGA6-208ENST00000469534 MS4A3Q96HJ5 214 aa8.97□□□□□ -0.97
ITGA6-208ENST00000469534 CCDC61Q9Y6R9 512 aa8.96□□□□□ -0.98
ITGA6-208ENST00000469534 PLCD3Q8N3E9 789 aa8.95□□□□□ -0.98
ITGA6-208ENST00000469534 TSPYL2Q9H2G4 693 aaPredicted RBP8.95□□□□□ -0.98
ITGA6-208ENST00000469534 NESP48681 1621 aa8.94□□□□□ -0.98
ITGA6-208ENST00000469534 POTEB2H3BUK9 544 aa8.94□□□□□ -0.98
ITGA6-208ENST00000469534 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
ITGA6-208ENST00000469534 OTUD5Q96G74 571 aa8.94□□□□□ -0.98
ITGA6-208ENST00000469534 ASTLQ6HA08 431 aaPredicted RBP8.93□□□□□ -0.98
ITGA6-208ENST00000469534 RASEFQ8IZ41 740 aa8.93□□□□□ -0.98
ITGA6-208ENST00000469534 ABCC8Q09428 1581 aa8.92□□□□□ -0.98
ITGA6-208ENST00000469534 PRDM2Q13029 1718 aa8.91□□□□□ -0.98
ITGA6-208ENST00000469534 ATMINO43313 823 aaPredicted RBP8.91□□□□□ -0.98
ITGA6-208ENST00000469534 METRNQ9UJH8 293 aa8.9□□□□□ -0.98
ITGA6-208ENST00000469534 NUBP1P53384 320 aa8.89□□□□□ -0.99
ITGA6-208ENST00000469534 SLC39A7Q92504 469 aa8.89□□□□□ -0.99
ITGA6-208ENST00000469534 KIF12Q96FN5 646 aa8.89□□□□□ -0.99
ITGA6-208ENST00000469534 ZBTB47Q9UFB7 747 aaPredicted RBP8.89□□□□□ -0.99
ITGA6-208ENST00000469534 FBXO3Q9UK99 471 aa8.89□□□□□ -0.99
ITGA6-208ENST00000469534 C7P10643 843 aa8.88□□□□□ -0.99
ITGA6-208ENST00000469534 CADPSQ9ULU8 1353 aa8.86□□□□□ -0.99
ITGA6-208ENST00000469534 KIF21AQ7Z4S6 1674 aa8.86□□□□□ -0.99
ITGA6-208ENST00000469534 CFTRP13569 1480 aa8.86□□□□□ -0.99
ITGA6-208ENST00000469534 LAMC3Q9Y6N6 1575 aa8.83□□□□□ -1
ITGA6-208ENST00000469534 MAP3K13O43283 966 aa8.83□□□□□ -1
ITGA6-208ENST00000469534 ATN1P54259 1190 aaPredicted RBP8.82□□□□□ -1
ITGA6-208ENST00000469534 TRIM41Q8WV44 630 aa8.81□□□□□ -1
ITGA6-208ENST00000469534 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
ITGA6-208ENST00000469534 SYNJ1O43426 1573 aa8.81□□□□□ -1
ITGA6-208ENST00000469534 MAMSTRQ6ZN01 415 aa8.8□□□□□ -1
ITGA6-208ENST00000469534 PLSCR2Q9NRY7 297 aa8.8□□□□□ -1
ITGA6-208ENST00000469534 BMP2KQ9NSY1 1161 aaPredicted RBP8.8□□□□□ -1
ITGA6-208ENST00000469534 POTEJP0CG39 1038 aa8.79□□□□□ -1
ITGA6-208ENST00000469534 VASPP50552 380 aaPredicted RBP8.79□□□□□ -1
ITGA6-208ENST00000469534 SGIP1Q9BQI5 828 aa8.79□□□□□ -1
ITGA6-208ENST00000469534 TRPC6Q9Y210 931 aa8.79□□□□□ -1
ITGA6-208ENST00000469534 WRNQ14191 1432 aaPredicted RBP eCLIP8.79□□□□□ -1
ITGA6-208ENST00000469534 TIE1P35590 1138 aa8.78□□□□□ -1
ITGA6-208ENST00000469534 CEP164Q9UPV0 1460 aa8.77□□□□□ -1
ITGA6-208ENST00000469534 CUX1P39880 1505 aa8.77□□□□□ -1.01
ITGA6-208ENST00000469534 POTEMA6NI47 508 aa8.77□□□□□ -1.01
ITGA6-208ENST00000469534 ERCC6Q03468 1493 aa8.77□□□□□ -1.01
ITGA6-208ENST00000469534 FAM9AQ8IZU1 332 aaPredicted RBP8.76□□□□□ -1.01
ITGA6-208ENST00000469534 FAM212AQ96EL1 285 aa8.76□□□□□ -1.01
ITGA6-208ENST00000469534 PDS5BQ9NTI5 1447 aa8.75□□□□□ -1.01
ITGA6-208ENST00000469534 SCUBE2Q9NQ36 999 aa8.75□□□□□ -1.01
ITGA6-208ENST00000469534 BIVM-ERCC5R4GMW8 1640 aa8.74□□□□□ -1.01
ITGA6-208ENST00000469534 POTEGQ6S5H5 508 aa8.74□□□□□ -1.01
ITGA6-208ENST00000469534 PCDHB13Q9Y5F0 798 aa8.73□□□□□ -1.01
ITGA6-208ENST00000469534 URB2Q14146 1524 aaKnown RBP8.73□□□□□ -1.01
ITGA6-208ENST00000469534 TOP2BQ02880 1626 aa8.72□□□□□ -1.01
ITGA6-208ENST00000469534 POTEFA5A3E0 1075 aa8.72□□□□□ -1.01
ITGA6-208ENST00000469534 TTLL13PA6NNM8 815 aa8.72□□□□□ -1.01
ITGA6-208ENST00000469534 TOPBP1Q92547 1522 aa8.71□□□□□ -1.01
ITGA6-208ENST00000469534 DNMBPQ6XZF7 1577 aa8.71□□□□□ -1.02
ITGA6-208ENST00000469534 DCAF8Q5TAQ9 597 aa8.71□□□□□ -1.02
ITGA6-208ENST00000469534 IFNL1Q8IU54 200 aa8.71□□□□□ -1.02
ITGA6-208ENST00000469534 FGD5Q6ZNL6 1462 aa8.7□□□□□ -1.02
ITGA6-208ENST00000469534 MRC2Q9UBG0 1479 aa8.7□□□□□ -1.02
ITGA6-208ENST00000469534 THOC2Q8NI27 1593 aaKnown RBP8.69□□□□□ -1.02
ITGA6-208ENST00000469534 KLHL34Q8N239 644 aa8.69□□□□□ -1.02
ITGA6-208ENST00000469534 RUSC2Q8N2Y8 1516 aa8.69□□□□□ -1.02
ITGA6-208ENST00000469534 SOGA1O94964 1423 aa8.68□□□□□ -1.02
ITGA6-208ENST00000469534 RAD54L2Q9Y4B4 1467 aa8.68□□□□□ -1.02
ITGA6-208ENST00000469534 SEC24BO95487 1268 aa8.67□□□□□ -1.02
ITGA6-208ENST00000469534 IER5LQ5T953 404 aa8.67□□□□□ -1.02
ITGA6-208ENST00000469534 IFNLR1Q8IU57 520 aaPredicted RBP8.67□□□□□ -1.02
ITGA6-208ENST00000469534 TRIM35Q9UPQ4 493 aa8.67□□□□□ -1.02
ITGA6-208ENST00000469534 PYGBP11216 843 aa8.66□□□□□ -1.02
ITGA6-208ENST00000469534 COLQQ9Y215 455 aaPredicted RBP8.66□□□□□ -1.02
ITGA6-208ENST00000469534 POLA1P09884 1462 aaPredicted RBP8.65□□□□□ -1.02
ITGA6-208ENST00000469534 GSE1Q14687 1217 aa8.64□□□□□ -1.03
ITGA6-208ENST00000469534 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
ITGA6-208ENST00000469534 PCDH10Q9P2E7 1040 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms