RNA–Protein interactions for RNA: ENST00000469380.1

CSF3R-209, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 321 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-209ENST00000469380 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
CSF3R-209ENST00000469380 CTTNBP2Q8WZ74 1663 aa17.93■□□□□ 0.46
CSF3R-209ENST00000469380 MAP3K1Q13233 1512 aa17.92■□□□□ 0.46
CSF3R-209ENST00000469380 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
CSF3R-209ENST00000469380 ZNF608Q9ULD9 1512 aaPredicted RBP17.9■□□□□ 0.46
CSF3R-209ENST00000469380 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
CSF3R-209ENST00000469380 EIF4G3O43432 1585 aaKnown RBP17.83■□□□□ 0.45
CSF3R-209ENST00000469380 MAGI1Q96QZ7 1491 aaPredicted RBP17.83■□□□□ 0.45
CSF3R-209ENST00000469380 SAMD9Q5K651 1589 aa17.83■□□□□ 0.44
CSF3R-209ENST00000469380 FMN1Q68DA7 1419 aa17.82■□□□□ 0.44
CSF3R-209ENST00000469380 CASKIN1Q8WXD9 1431 aa17.81■□□□□ 0.44
CSF3R-209ENST00000469380 TTBK1Q5TCY1 1321 aaPredicted RBP17.8■□□□□ 0.44
CSF3R-209ENST00000469380 SNAPC4Q5SXM2 1469 aa17.8■□□□□ 0.44
CSF3R-209ENST00000469380 FYCO1Q9BQS8 1478 aa17.79■□□□□ 0.44
CSF3R-209ENST00000469380 FHOD3Q2V2M9 1422 aa17.79■□□□□ 0.44
CSF3R-209ENST00000469380 KANK4Q5T7N3 995 aaPredicted RBP17.78■□□□□ 0.44
CSF3R-209ENST00000469380 TIAM1Q13009 1591 aa17.77■□□□□ 0.44
CSF3R-209ENST00000469380 KIAA0586Q9BVV6 1533 aa17.77■□□□□ 0.43
CSF3R-209ENST00000469380 IQGAP2Q13576 1575 aa17.76■□□□□ 0.43
CSF3R-209ENST00000469380 SYNJ2O15056 1496 aa17.75■□□□□ 0.43
CSF3R-209ENST00000469380 GRIN2AQ12879 1464 aa17.75■□□□□ 0.43
CSF3R-209ENST00000469380 P3H3Q8IVL6 736 aa17.75■□□□□ 0.43
CSF3R-209ENST00000469380 UGGT2Q9NYU1 1516 aa17.74■□□□□ 0.43
CSF3R-209ENST00000469380 PCF11O94913 1555 aaKnown RBP17.72■□□□□ 0.43
CSF3R-209ENST00000469380 LRRC9Q6ZRR7 1453 aa17.72■□□□□ 0.43
CSF3R-209ENST00000469380 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
CSF3R-209ENST00000469380 CFAP43Q8NDM7 1665 aa17.69■□□□□ 0.42
CSF3R-209ENST00000469380 CHMP7Q8WUX9 453 aaPredicted RBP17.69■□□□□ 0.42
CSF3R-209ENST00000469380 NUP160Q12769 1436 aa17.65■□□□□ 0.42
CSF3R-209ENST00000469380 CCNB3Q8WWL7 1395 aa17.62■□□□□ 0.41
CSF3R-209ENST00000469380 ATP1B4Q9UN42 357 aaPredicted RBP17.6■□□□□ 0.41
CSF3R-209ENST00000469380 DISP1Q96F81 1524 aa17.6■□□□□ 0.41
CSF3R-209ENST00000469380 CEP170Q5SW79 1584 aa17.59■□□□□ 0.41
CSF3R-209ENST00000469380 CCDC18Q5T9S5 1454 aa17.59■□□□□ 0.41
CSF3R-209ENST00000469380 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
CSF3R-209ENST00000469380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.57■□□□□ 0.4
CSF3R-209ENST00000469380 HNRNPUL2Q1KMD3 747 aaKnown RBP17.57■□□□□ 0.4
CSF3R-209ENST00000469380 KIAA0556O60303 1618 aa17.57■□□□□ 0.4
CSF3R-209ENST00000469380 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.55■□□□□ 0.4
CSF3R-209ENST00000469380 HECW1Q76N89 1606 aa17.55■□□□□ 0.4
CSF3R-209ENST00000469380 FBLN2P98095 1184 aa17.54■□□□□ 0.4
CSF3R-209ENST00000469380 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
CSF3R-209ENST00000469380 MTUS2Q5JR59 1369 aa17.53■□□□□ 0.4
CSF3R-209ENST00000469380 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
CSF3R-209ENST00000469380 JPH4Q96JJ6 628 aa17.53■□□□□ 0.4
CSF3R-209ENST00000469380 EPRSP07814 1512 aaKnown RBP17.5■□□□□ 0.39
CSF3R-209ENST00000469380 EHBP1L1Q8N3D4 1523 aa17.5■□□□□ 0.39
CSF3R-209ENST00000469380 LRRIQ1Q96JM4 1722 aa17.48■□□□□ 0.39
CSF3R-209ENST00000469380 ARHGEF11O15085 1522 aa17.45■□□□□ 0.38
CSF3R-209ENST00000469380 CLSPNQ9HAW4 1339 aa17.44■□□□□ 0.38
CSF3R-209ENST00000469380 NCOA2Q15596 1464 aa17.44■□□□□ 0.38
CSF3R-209ENST00000469380 FGD6Q6ZV73 1430 aa17.43■□□□□ 0.38
CSF3R-209ENST00000469380 SUPT6HQ7KZ85 1726 aaKnown RBP17.43■□□□□ 0.38
CSF3R-209ENST00000469380 RAPGEF6Q8TEU7 1601 aa17.43■□□□□ 0.38
CSF3R-209ENST00000469380 MYOM3Q5VTT5 1437 aa17.41■□□□□ 0.38
CSF3R-209ENST00000469380 CDK11AQ9UQ88 783 aaPredicted RBP17.41■□□□□ 0.38
CSF3R-209ENST00000469380 NUP153P49790 1475 aaKnown RBP17.41■□□□□ 0.38
CSF3R-209ENST00000469380 MAGI3Q5TCQ9 1506 aa17.39■□□□□ 0.37
CSF3R-209ENST00000469380 DNAJC5Q9H3Z4 198 aa17.39■□□□□ 0.37
CSF3R-209ENST00000469380 FAM50AQ14320 339 aaKnown RBP17.37■□□□□ 0.37
CSF3R-209ENST00000469380 CHD1O14646 1710 aa17.37■□□□□ 0.37
CSF3R-209ENST00000469380 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
CSF3R-209ENST00000469380 PRG4Q92954 1404 aaPredicted RBP17.36■□□□□ 0.37
CSF3R-209ENST00000469380 MIA2Q96PC5 1412 aa17.35■□□□□ 0.37
CSF3R-209ENST00000469380 SHROOM2Q13796 1616 aa17.35■□□□□ 0.37
CSF3R-209ENST00000469380 ABCA8O94911 1581 aa17.34■□□□□ 0.37
CSF3R-209ENST00000469380 SETD5Q9C0A6 1442 aa17.34■□□□□ 0.37
CSF3R-209ENST00000469380 TCOF1Q13428 1488 aaKnown RBP17.33■□□□□ 0.37
CSF3R-209ENST00000469380 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.37
CSF3R-209ENST00000469380 DHX57Q6P158 1386 aaKnown RBP17.32■□□□□ 0.36
CSF3R-209ENST00000469380 PTPRGP23470 1445 aa17.31■□□□□ 0.36
CSF3R-209ENST00000469380 TROQ12816 1431 aaPredicted RBP17.3■□□□□ 0.36
CSF3R-209ENST00000469380 ITGAEP38570 1179 aa17.3■□□□□ 0.36
CSF3R-209ENST00000469380 RAB3GAP2Q9H2M9 1393 aa17.28■□□□□ 0.36
CSF3R-209ENST00000469380 CLASP1Q7Z460 1538 aa17.27■□□□□ 0.36
CSF3R-209ENST00000469380 PTPN23Q9H3S7 1636 aa17.27■□□□□ 0.36
CSF3R-209ENST00000469380 ATP10BO94823 1461 aa17.24■□□□□ 0.35
CSF3R-209ENST00000469380 ADCY10Q96PN6 1610 aa17.23■□□□□ 0.35
CSF3R-209ENST00000469380 HFM1A2PYH4 1435 aa17.22■□□□□ 0.35
CSF3R-209ENST00000469380 PLEKHD1A6NEE1 506 aa17.22■□□□□ 0.35
CSF3R-209ENST00000469380 ARID3CA6NKF2 412 aa17.22■□□□□ 0.35
CSF3R-209ENST00000469380 UACAQ9BZF9 1416 aa17.21■□□□□ 0.35
CSF3R-209ENST00000469380 PTPRKQ15262 1439 aa17.21■□□□□ 0.34
CSF3R-209ENST00000469380 AKNAQ7Z591 1439 aa17.21■□□□□ 0.34
CSF3R-209ENST00000469380 ACIN1Q9UKV3 1341 aaKnown RBP17.2■□□□□ 0.34
CSF3R-209ENST00000469380 GPATCH8Q9UKJ3 1502 aaKnown RBP17.16■□□□□ 0.34
CSF3R-209ENST00000469380 NAIPQ13075 1403 aa17.15■□□□□ 0.34
CSF3R-209ENST00000469380 UHRF1BP1LA0JNW5 1464 aa17.14■□□□□ 0.33
CSF3R-209ENST00000469380 ABCC2Q92887 1545 aa17.14■□□□□ 0.33
CSF3R-209ENST00000469380 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
CSF3R-209ENST00000469380 ITSN2Q9NZM3 1697 aa17.13■□□□□ 0.33
CSF3R-209ENST00000469380 ABCC10Q5T3U5 1492 aa17.13■□□□□ 0.33
CSF3R-209ENST00000469380 KIF14Q15058 1648 aa17.12■□□□□ 0.33
CSF3R-209ENST00000469380 CFDP1Q9UEE9 299 aaPredicted RBP17.12■□□□□ 0.33
CSF3R-209ENST00000469380 ERCC6L2Q5T890 1561 aa17.11■□□□□ 0.33
CSF3R-209ENST00000469380 DAPK1P53355 1430 aa17.1■□□□□ 0.33
CSF3R-209ENST00000469380 ABCC5O15440 1437 aa17.09■□□□□ 0.33
CSF3R-209ENST00000469380 MAPKBP1O60336 1514 aa17.09■□□□□ 0.33
CSF3R-209ENST00000469380 DNMT1P26358 1616 aaKnown RBP17.09■□□□□ 0.33
CSF3R-209ENST00000469380 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms