RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 RUSC2Q8N2Y8 1516 aa34.86■■■■□ 3.17
UPK3B-204ENST00000469114 NPM1P06748 294 aaKnown RBP eCLIP34.78■■■■□ 3.16
UPK3B-204ENST00000469114 ABCC10Q5T3U5 1492 aa34.77■■■■□ 3.16
UPK3B-204ENST00000469114 FAM69CQ0P6D2 419 aa34.75■■■■□ 3.15
UPK3B-204ENST00000469114 MAPKBP1O60336 1514 aa34.74■■■■□ 3.15
UPK3B-204ENST00000469114 ADCY10Q96PN6 1610 aa34.67■■■■□ 3.14
UPK3B-204ENST00000469114 DIP2BQ9P265 1576 aa34.67■■■■□ 3.14
UPK3B-204ENST00000469114 KIAA0586Q9BVV6 1533 aa34.63■■■■□ 3.13
UPK3B-204ENST00000469114 CUL7Q14999 1698 aa34.57■■■■□ 3.13
UPK3B-204ENST00000469114 IGF1RP08069 1367 aa34.54■■■■□ 3.12
UPK3B-204ENST00000469114 KIF27Q86VH2 1401 aa34.53■■■■□ 3.12
UPK3B-204ENST00000469114 KDM6BO15054 1643 aa34.52■■■■□ 3.12
UPK3B-204ENST00000469114 TSPOAP1O95153 1857 aa34.46■■■■□ 3.11
UPK3B-204ENST00000469114 PTPRGP23470 1445 aa34.4■■■■□ 3.1
UPK3B-204ENST00000469114 CARMIL2Q6F5E8 1435 aa34.33■■■■□ 3.09
UPK3B-204ENST00000469114 KDM4FA0A1W2PPD8 638 aa34.32■■■■□ 3.08
UPK3B-204ENST00000469114 CARMIL1Q5VZK9 1371 aa34.32■■■■□ 3.08
UPK3B-204ENST00000469114 TNIKQ9UKE5 1360 aa34.31■■■■□ 3.08
UPK3B-204ENST00000469114 TTBK1Q5TCY1 1321 aaPredicted RBP34.3■■■■□ 3.08
UPK3B-204ENST00000469114 ABCC2Q92887 1545 aa34.29■■■■□ 3.08
UPK3B-204ENST00000469114 IQGAP2Q13576 1575 aa34.23■■■■□ 3.07
UPK3B-204ENST00000469114 PLB1Q6P1J6 1458 aa34.23■■■■□ 3.07
UPK3B-204ENST00000469114 ASXL2Q76L83 1435 aa34.21■■■■□ 3.07
UPK3B-204ENST00000469114 GLI2P10070 1586 aa34.19■■■■□ 3.06
UPK3B-204ENST00000469114 UHRF1BP1LA0JNW5 1464 aa34.17■■■■□ 3.06
UPK3B-204ENST00000469114 PPRC1Q5VV67 1664 aaKnown RBP34.15■■■■□ 3.06
UPK3B-204ENST00000469114 UACAQ9BZF9 1416 aa34.13■■■■□ 3.05
UPK3B-204ENST00000469114 DISP1Q96F81 1524 aa34.08■■■■□ 3.05
UPK3B-204ENST00000469114 KDM5BQ9UGL1 1544 aa34.02■■■■□ 3.04
UPK3B-204ENST00000469114 EPRSP07814 1512 aaKnown RBP34■■■■□ 3.03
UPK3B-204ENST00000469114 UGGT2Q9NYU1 1516 aa33.99■■■■□ 3.03
UPK3B-204ENST00000469114 MAP3K4Q9Y6R4 1608 aa33.98■■■■□ 3.03
UPK3B-204ENST00000469114 ADGRL1O94910 1474 aa33.98■■■■□ 3.03
UPK3B-204ENST00000469114 RAPGEF2Q9Y4G8 1499 aa33.96■■■■□ 3.03
UPK3B-204ENST00000469114 ZCCHC11Q5TAX3 1644 aaKnown RBP33.96■■■■□ 3.03
UPK3B-204ENST00000469114 TEX14Q8IWB6 1497 aa33.95■■■■□ 3.03
UPK3B-204ENST00000469114 KIAA0556O60303 1618 aa33.93■■■■□ 3.02
UPK3B-204ENST00000469114 COL17A1Q9UMD9 1497 aaPredicted RBP33.92■■■■□ 3.02
UPK3B-204ENST00000469114 WDR7Q9Y4E6 1490 aa33.81■■■■□ 3
UPK3B-204ENST00000469114 ILDR1Q86SU0 546 aaPredicted RBP33.78■■■■□ 3
UPK3B-204ENST00000469114 CTTNBP2Q8WZ74 1663 aa33.74■■■□□ 2.99
UPK3B-204ENST00000469114 GOLGA3Q08378 1498 aa33.7■■■□□ 2.99
UPK3B-204ENST00000469114 CFAP43Q8NDM7 1665 aa33.68■■■□□ 2.98
UPK3B-204ENST00000469114 HECW2Q9P2P5 1572 aa33.68■■■□□ 2.98
UPK3B-204ENST00000469114 MAGI3Q5TCQ9 1506 aa33.66■■■□□ 2.98
UPK3B-204ENST00000469114 CD109Q6YHK3 1445 aa33.66■■■□□ 2.98
UPK3B-204ENST00000469114 ABCA8O94911 1581 aa33.64■■■□□ 2.98
UPK3B-204ENST00000469114 KCNH8Q96L42 1107 aa33.59■■■□□ 2.97
UPK3B-204ENST00000469114 PRXQ9BXM0 1461 aa33.48■■■□□ 2.95
UPK3B-204ENST00000469114 FAM9AQ8IZU1 332 aaPredicted RBP33.45■■■□□ 2.95
UPK3B-204ENST00000469114 KIF21BO75037 1637 aa33.43■■■□□ 2.94
UPK3B-204ENST00000469114 ARAP3Q8WWN8 1544 aa33.4■■■□□ 2.94
UPK3B-204ENST00000469114 ATP10BO94823 1461 aa33.35■■■□□ 2.93
UPK3B-204ENST00000469114 ARID3CA6NKF2 412 aa33.33■■■□□ 2.93
UPK3B-204ENST00000469114 PHLDB1Q86UU1 1377 aa33.31■■■□□ 2.92
UPK3B-204ENST00000469114 ABCA9Q8IUA7 1624 aa33.31■■■□□ 2.92
UPK3B-204ENST00000469114 P3H3Q8IVL6 736 aa33.3■■■□□ 2.92
UPK3B-204ENST00000469114 SAMD9Q5K651 1589 aa33.21■■■□□ 2.91
UPK3B-204ENST00000469114 RAPGEF6Q8TEU7 1601 aa33.2■■■□□ 2.91
UPK3B-204ENST00000469114 NEO1Q92859 1461 aa33.2■■■□□ 2.91
UPK3B-204ENST00000469114 ADAMTSL3P82987 1691 aa33.2■■■□□ 2.9
UPK3B-204ENST00000469114 PTPRMP28827 1452 aa33.17■■■□□ 2.9
UPK3B-204ENST00000469114 RAPGEF3O95398 923 aa33.16■■■□□ 2.9
UPK3B-204ENST00000469114 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.13■■■□□ 2.89
UPK3B-204ENST00000469114 HNRNPUL2Q1KMD3 747 aaKnown RBP33.13■■■□□ 2.89
UPK3B-204ENST00000469114 CSRNP3Q8WYN3 585 aa33.09■■■□□ 2.89
UPK3B-204ENST00000469114 FRMPD1Q5SYB0 1578 aa33.09■■■□□ 2.89
UPK3B-204ENST00000469114 BCORL1Q5H9F3 1711 aa33.08■■■□□ 2.89
UPK3B-204ENST00000469114 FBXO41Q8TF61 875 aa33.07■■■□□ 2.88
UPK3B-204ENST00000469114 NUP153P49790 1475 aaKnown RBP33.05■■■□□ 2.88
UPK3B-204ENST00000469114 ARID4BQ4LE39 1312 aaPredicted RBP33.04■■■□□ 2.88
UPK3B-204ENST00000469114 MADDQ8WXG6 1647 aa33.02■■■□□ 2.88
UPK3B-204ENST00000469114 ARHGEF40Q8TER5 1519 aa32.98■■■□□ 2.87
UPK3B-204ENST00000469114 PCF11O94913 1555 aaKnown RBP32.97■■■□□ 2.87
UPK3B-204ENST00000469114 DENND4BO75064 1496 aaPredicted RBP32.96■■■□□ 2.87
UPK3B-204ENST00000469114 FHOD3Q2V2M9 1422 aa32.95■■■□□ 2.87
UPK3B-204ENST00000469114 PLEKHD1A6NEE1 506 aa32.94■■■□□ 2.86
UPK3B-204ENST00000469114 CFAP74Q9C0B2 1584 aa32.94■■■□□ 2.86
UPK3B-204ENST00000469114 RICTORQ6R327 1708 aa32.94■■■□□ 2.86
UPK3B-204ENST00000469114 RANGAP1P46060 587 aaPredicted RBP32.92■■■□□ 2.86
UPK3B-204ENST00000469114 EEA1Q15075 1411 aa32.91■■■□□ 2.86
UPK3B-204ENST00000469114 AKNAQ7Z591 1439 aa32.91■■■□□ 2.86
UPK3B-204ENST00000469114 LMTK3Q96Q04 1460 aa32.91■■■□□ 2.86
UPK3B-204ENST00000469114 RIMS1Q86UR5 1692 aaKnown RBP32.91■■■□□ 2.86
UPK3B-204ENST00000469114 FANCAO15360 1455 aa32.89■■■□□ 2.86
UPK3B-204ENST00000469114 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.85■■■□□ 2.85
UPK3B-204ENST00000469114 POGZQ7Z3K3 1410 aa32.83■■■□□ 2.85
UPK3B-204ENST00000469114 ZMYM4Q5VZL5 1548 aa32.82■■■□□ 2.84
UPK3B-204ENST00000469114 EFCAB5A4FU69 1503 aa32.81■■■□□ 2.84
UPK3B-204ENST00000469114 TTC37Q6PGP7 1564 aa32.8■■■□□ 2.84
UPK3B-204ENST00000469114 ZFYVE16Q7Z3T8 1539 aa32.78■■■□□ 2.84
UPK3B-204ENST00000469114 MAGI2Q86UL8 1455 aa32.75■■■□□ 2.83
UPK3B-204ENST00000469114 YEATS2Q9ULM3 1422 aa32.72■■■□□ 2.83
UPK3B-204ENST00000469114 PLPPR3Q6T4P5 718 aa32.7■■■□□ 2.83
UPK3B-204ENST00000469114 SIGLEC1Q9BZZ2 1709 aa32.69■■■□□ 2.82
UPK3B-204ENST00000469114 HSPA2P54652 639 aa32.69■■■□□ 2.82
UPK3B-204ENST00000469114 HECW1Q76N89 1606 aa32.69■■■□□ 2.82
UPK3B-204ENST00000469114 CDK13Q14004 1512 aaKnown RBP32.68■■■□□ 2.82
UPK3B-204ENST00000469114 FER1L4A9Z1Z3 1794 aa32.65■■■□□ 2.82
UPK3B-204ENST00000469114 PLCH2O75038 1416 aa32.64■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms