RNA–Protein interactions for RNA: ENST00000468552.1

EFCAB6-206, Transcript of EF-hand calcium binding domain 6, humanhuman

TSL 1 (best)

Gene EFCAB6, Length 5,120 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB6-206ENST00000468552 CHGAP10645 457 aaKnown RBP11.47□□□□□ -0.57
EFCAB6-206ENST00000468552 MSNP26038 577 aaKnown RBP11.47□□□□□ -0.57
EFCAB6-206ENST00000468552 ZNF777Q9ULD5 760 aaPredicted RBP11.46□□□□□ -0.57
EFCAB6-206ENST00000468552 PLCB2Q00722 1185 aa11.46□□□□□ -0.58
EFCAB6-206ENST00000468552 TNNT3P45378 269 aaPredicted RBP11.44□□□□□ -0.58
EFCAB6-206ENST00000468552 CHMP4BQ9H444 224 aaKnown RBP11.43□□□□□ -0.58
EFCAB6-206ENST00000468552 RTN4Q9NQC3 1192 aaKnown RBP11.43□□□□□ -0.58
EFCAB6-206ENST00000468552 NOP58Q9Y2X3 529 aaKnown RBP11.43□□□□□ -0.58
EFCAB6-206ENST00000468552 SCAF1Q9H7N4 1312 aaKnown RBP11.41□□□□□ -0.58
EFCAB6-206ENST00000468552 IRX6P78412 446 aaPredicted RBP11.41□□□□□ -0.58
EFCAB6-206ENST00000468552 FBLN2P98095 1184 aa11.41□□□□□ -0.58
EFCAB6-206ENST00000468552 SCRIBQ14160 1630 aa11.4□□□□□ -0.58
EFCAB6-206ENST00000468552 RB1CC1Q8TDY2 1594 aa11.4□□□□□ -0.58
EFCAB6-206ENST00000468552 GOLGA6L4A6NEF3 574 aa11.39□□□□□ -0.59
EFCAB6-206ENST00000468552 HSP90AB1P08238 724 aaKnown RBP11.39□□□□□ -0.59
EFCAB6-206ENST00000468552 AMER1Q5JTC6 1135 aaPredicted RBP11.38□□□□□ -0.59
EFCAB6-206ENST00000468552 PNNQ9H307 717 aaKnown RBP11.38□□□□□ -0.59
EFCAB6-206ENST00000468552 PTMSP20962 102 aa11.37□□□□□ -0.59
EFCAB6-206ENST00000468552 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
EFCAB6-206ENST00000468552 LAS1LQ9Y4W2 734 aaKnown RBP11.37□□□□□ -0.59
EFCAB6-206ENST00000468552 CSRNP3Q8WYN3 585 aa11.36□□□□□ -0.59
EFCAB6-206ENST00000468552 USP35Q9P2H5 1018 aa11.36□□□□□ -0.59
EFCAB6-206ENST00000468552 MS4A1P11836 297 aa11.36□□□□□ -0.59
EFCAB6-206ENST00000468552 FTSJ3Q8IY81 847 aaKnown RBP11.36□□□□□ -0.59
EFCAB6-206ENST00000468552 CFAP44Q96MT7 982 aa11.36□□□□□ -0.59
EFCAB6-206ENST00000468552 PPP4R2Q9NY27 417 aa11.35□□□□□ -0.59
EFCAB6-206ENST00000468552 TULP1O00294 542 aaPredicted RBP11.35□□□□□ -0.59
EFCAB6-206ENST00000468552 EIF4G2P78344 907 aaKnown RBP eCLIP11.34□□□□□ -0.59
EFCAB6-206ENST00000468552 FGD1P98174 961 aa11.34□□□□□ -0.59
EFCAB6-206ENST00000468552 KIAA2012Q0VF49 1180 aa11.34□□□□□ -0.59
EFCAB6-206ENST00000468552 TPRNQ4KMQ1 711 aa11.34□□□□□ -0.59
EFCAB6-206ENST00000468552 P3H3Q8IVL6 736 aa11.34□□□□□ -0.59
EFCAB6-206ENST00000468552 DRC7Q8IY82 874 aa11.34□□□□□ -0.59
EFCAB6-206ENST00000468552 PABPN1Q86U42 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
EFCAB6-206ENST00000468552 HSCBQ8IWL3 235 aa11.33□□□□□ -0.6
EFCAB6-206ENST00000468552 MIER1Q8N108 512 aa11.32□□□□□ -0.6
EFCAB6-206ENST00000468552 GOLGA6L1Q8N7Z2 621 aa11.31□□□□□ -0.6
EFCAB6-206ENST00000468552 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
EFCAB6-206ENST00000468552 DEKP35659 375 aaKnown RBP11.3□□□□□ -0.6
EFCAB6-206ENST00000468552 CDCA8Q53HL2 280 aa11.3□□□□□ -0.6
EFCAB6-206ENST00000468552 MCCP23508 829 aa11.29□□□□□ -0.6
EFCAB6-206ENST00000468552 NOC3LQ8WTT2 800 aaKnown RBP11.29□□□□□ -0.6
EFCAB6-206ENST00000468552 KCNJ4P48050 445 aa11.29□□□□□ -0.6
EFCAB6-206ENST00000468552 A0A0G2JS52 829 aa11.28□□□□□ -0.6
EFCAB6-206ENST00000468552 CALRP27797 417 aaKnown RBP11.28□□□□□ -0.6
EFCAB6-206ENST00000468552 TSPY4P0CV99 314 aa11.27□□□□□ -0.61
EFCAB6-206ENST00000468552 TSPY10P0CW01 314 aa11.27□□□□□ -0.61
EFCAB6-206ENST00000468552 SETQ01105 290 aaPredicted RBP11.26□□□□□ -0.61
EFCAB6-206ENST00000468552 KDM2AQ9Y2K7 1162 aa11.26□□□□□ -0.61
EFCAB6-206ENST00000468552 RGS3P49796 1198 aa11.26□□□□□ -0.61
EFCAB6-206ENST00000468552 SUPT16HQ9Y5B9 1047 aaKnown RBP11.26□□□□□ -0.61
EFCAB6-206ENST00000468552 NPM1P06748 294 aaKnown RBP eCLIP11.25□□□□□ -0.61
EFCAB6-206ENST00000468552 GBP4Q96PP9 640 aa11.25□□□□□ -0.61
EFCAB6-206ENST00000468552 HTATSF1O43719 755 aaKnown RBP11.25□□□□□ -0.61
EFCAB6-206ENST00000468552 SYAP1Q96A49 352 aaPredicted RBP11.24□□□□□ -0.61
EFCAB6-206ENST00000468552 NUDCQ9Y266 331 aa11.24□□□□□ -0.61
EFCAB6-206ENST00000468552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.24□□□□□ -0.61
EFCAB6-206ENST00000468552 MAPK8IP3Q9UPT6 1336 aa11.24□□□□□ -0.61
EFCAB6-206ENST00000468552 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
EFCAB6-206ENST00000468552 TPM4P67936 248 aa11.23□□□□□ -0.61
EFCAB6-206ENST00000468552 OS9Q13438 667 aaPredicted RBP11.23□□□□□ -0.61
EFCAB6-206ENST00000468552 NAP1L2Q9ULW6 460 aaPredicted RBP11.23□□□□□ -0.61
EFCAB6-206ENST00000468552 A0A0U1RQG5 324 aaPredicted RBP11.22□□□□□ -0.61
EFCAB6-206ENST00000468552 CLSTN1O94985 981 aa11.22□□□□□ -0.61
EFCAB6-206ENST00000468552 CCDC34Q96HJ3 373 aa11.21□□□□□ -0.62
EFCAB6-206ENST00000468552 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
EFCAB6-206ENST00000468552 C14orf37Q86TY3 774 aa11.2□□□□□ -0.62
EFCAB6-206ENST00000468552 ARID4BQ4LE39 1312 aaPredicted RBP11.19□□□□□ -0.62
EFCAB6-206ENST00000468552 GOLGA2Q08379 1002 aa11.19□□□□□ -0.62
EFCAB6-206ENST00000468552 CHIC2Q9UKJ5 165 aa11.19□□□□□ -0.62
EFCAB6-206ENST00000468552 GNL2Q13823 731 aaKnown RBP11.18□□□□□ -0.62
EFCAB6-206ENST00000468552 HAP1P54257 671 aaPredicted RBP11.17□□□□□ -0.62
EFCAB6-206ENST00000468552 TAOK2Q9UL54 1235 aa11.17□□□□□ -0.62
EFCAB6-206ENST00000468552 FRAT1Q92837 279 aaPredicted RBP11.17□□□□□ -0.62
EFCAB6-206ENST00000468552 NCBP3Q53F19 620 aaKnown RBP11.16□□□□□ -0.62
EFCAB6-206ENST00000468552 GOLGA6L3A6NEY3 463 aa11.16□□□□□ -0.62
EFCAB6-206ENST00000468552 PPP1R15AO75807 674 aaPredicted RBP11.16□□□□□ -0.62
EFCAB6-206ENST00000468552 HSP90AA2PQ14568 343 aaPredicted RBP11.16□□□□□ -0.62
EFCAB6-206ENST00000468552 PLPPR3Q6T4P5 718 aa11.15□□□□□ -0.62
EFCAB6-206ENST00000468552 RSPH6AQ9H0K4 717 aa11.15□□□□□ -0.62
EFCAB6-206ENST00000468552 CSPP1Q1MSJ5 1256 aa11.14□□□□□ -0.63
EFCAB6-206ENST00000468552 NPHP1O15259 732 aa11.13□□□□□ -0.63
EFCAB6-206ENST00000468552 KIAA1211Q6ZU35 1233 aa11.13□□□□□ -0.63
EFCAB6-206ENST00000468552 TPM3P06753 285 aa11.13□□□□□ -0.63
EFCAB6-206ENST00000468552 GPS2Q13227 327 aa11.12□□□□□ -0.63
EFCAB6-206ENST00000468552 PRM3Q9NNZ6 103 aa11.12□□□□□ -0.63
EFCAB6-206ENST00000468552 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
EFCAB6-206ENST00000468552 ARID3AQ99856 593 aa11.11□□□□□ -0.63
EFCAB6-206ENST00000468552 CEP89Q96ST8 783 aa11.11□□□□□ -0.63
EFCAB6-206ENST00000468552 NEUROD2Q15784 382 aa11.11□□□□□ -0.63
EFCAB6-206ENST00000468552 HIRIP3Q9BW71 556 aaPredicted RBP11.11□□□□□ -0.63
EFCAB6-206ENST00000468552 MTUS2Q5JR59 1369 aa11.1□□□□□ -0.63
EFCAB6-206ENST00000468552 PHF14O94880 888 aa11.1□□□□□ -0.63
EFCAB6-206ENST00000468552 B4GALNT3Q6L9W6 998 aa11.09□□□□□ -0.63
EFCAB6-206ENST00000468552 RBM19Q9Y4C8 960 aaKnown RBP11.09□□□□□ -0.63
EFCAB6-206ENST00000468552 CALD1Q05682 793 aaKnown RBP11.08□□□□□ -0.64
EFCAB6-206ENST00000468552 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.08□□□□□ -0.64
EFCAB6-206ENST00000468552 TCERG1O14776 1098 aaKnown RBP11.07□□□□□ -0.64
EFCAB6-206ENST00000468552 SPRYD3Q8NCJ5 442 aa11.07□□□□□ -0.64
EFCAB6-206ENST00000468552 IPO8O15397 1037 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 376.6 ms