RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 RUSC2Q8N2Y8 1516 aa23.28■■□□□ 1.32
PTPN7-207ENST00000468385 KIF13AQ9H1H9 1805 aa23.25■■□□□ 1.31
PTPN7-207ENST00000468385 IGF1RP08069 1367 aa23.15■■□□□ 1.3
PTPN7-207ENST00000468385 ABCC10Q5T3U5 1492 aa23.14■■□□□ 1.29
PTPN7-207ENST00000468385 KIAA0586Q9BVV6 1533 aa23.13■■□□□ 1.29
PTPN7-207ENST00000468385 MAPKBP1O60336 1514 aa23.13■■□□□ 1.29
PTPN7-207ENST00000468385 FAM69CQ0P6D2 419 aa23.12■■□□□ 1.29
PTPN7-207ENST00000468385 ADCY10Q96PN6 1610 aa23.11■■□□□ 1.29
PTPN7-207ENST00000468385 KIF27Q86VH2 1401 aa23.11■■□□□ 1.29
PTPN7-207ENST00000468385 NPM1P06748 294 aaKnown RBP eCLIP23.11■■□□□ 1.29
PTPN7-207ENST00000468385 CUL7Q14999 1698 aa23.09■■□□□ 1.29
PTPN7-207ENST00000468385 DIP2BQ9P265 1576 aa23.07■■□□□ 1.28
PTPN7-207ENST00000468385 CARMIL1Q5VZK9 1371 aa22.99■■□□□ 1.27
PTPN7-207ENST00000468385 PTPRGP23470 1445 aa22.95■■□□□ 1.26
PTPN7-207ENST00000468385 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
PTPN7-207ENST00000468385 KDM6BO15054 1643 aa22.9■■□□□ 1.26
PTPN7-207ENST00000468385 CARMIL2Q6F5E8 1435 aa22.89■■□□□ 1.25
PTPN7-207ENST00000468385 TTBK1Q5TCY1 1321 aaPredicted RBP22.88■■□□□ 1.25
PTPN7-207ENST00000468385 TSPOAP1O95153 1857 aa22.88■■□□□ 1.25
PTPN7-207ENST00000468385 IQGAP2Q13576 1575 aa22.87■■□□□ 1.25
PTPN7-207ENST00000468385 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
PTPN7-207ENST00000468385 UHRF1BP1LA0JNW5 1464 aa22.81■■□□□ 1.24
PTPN7-207ENST00000468385 KDM4FA0A1W2PPD8 638 aa22.81■■□□□ 1.24
PTPN7-207ENST00000468385 DISP1Q96F81 1524 aa22.81■■□□□ 1.24
PTPN7-207ENST00000468385 ASXL2Q76L83 1435 aa22.81■■□□□ 1.24
PTPN7-207ENST00000468385 PLB1Q6P1J6 1458 aa22.79■■□□□ 1.24
PTPN7-207ENST00000468385 GLI2P10070 1586 aa22.78■■□□□ 1.24
PTPN7-207ENST00000468385 UACAQ9BZF9 1416 aa22.78■■□□□ 1.24
PTPN7-207ENST00000468385 PPRC1Q5VV67 1664 aaKnown RBP22.75■■□□□ 1.23
PTPN7-207ENST00000468385 RAPGEF2Q9Y4G8 1499 aa22.74■■□□□ 1.23
PTPN7-207ENST00000468385 UGGT2Q9NYU1 1516 aa22.74■■□□□ 1.23
PTPN7-207ENST00000468385 KDM5BQ9UGL1 1544 aa22.71■■□□□ 1.23
PTPN7-207ENST00000468385 KIAA0556O60303 1618 aa22.68■■□□□ 1.22
PTPN7-207ENST00000468385 EPRSP07814 1512 aaKnown RBP22.68■■□□□ 1.22
PTPN7-207ENST00000468385 ZCCHC11Q5TAX3 1644 aaKnown RBP22.64■■□□□ 1.22
PTPN7-207ENST00000468385 COL17A1Q9UMD9 1497 aaPredicted RBP22.64■■□□□ 1.21
PTPN7-207ENST00000468385 MAP3K4Q9Y6R4 1608 aa22.64■■□□□ 1.21
PTPN7-207ENST00000468385 TEX14Q8IWB6 1497 aa22.57■■□□□ 1.2
PTPN7-207ENST00000468385 ADGRL1O94910 1474 aa22.56■■□□□ 1.2
PTPN7-207ENST00000468385 WDR7Q9Y4E6 1490 aa22.55■■□□□ 1.2
PTPN7-207ENST00000468385 CTTNBP2Q8WZ74 1663 aa22.55■■□□□ 1.2
PTPN7-207ENST00000468385 GOLGA3Q08378 1498 aa22.5■■□□□ 1.19
PTPN7-207ENST00000468385 ABCA8O94911 1581 aa22.5■■□□□ 1.19
PTPN7-207ENST00000468385 PRXQ9BXM0 1461 aa22.48■■□□□ 1.19
PTPN7-207ENST00000468385 MAGI3Q5TCQ9 1506 aa22.44■■□□□ 1.18
PTPN7-207ENST00000468385 CD109Q6YHK3 1445 aa22.43■■□□□ 1.18
PTPN7-207ENST00000468385 CFAP43Q8NDM7 1665 aa22.42■■□□□ 1.18
PTPN7-207ENST00000468385 KCNH8Q96L42 1107 aa22.41■■□□□ 1.18
PTPN7-207ENST00000468385 HECW2Q9P2P5 1572 aa22.31■■□□□ 1.16
PTPN7-207ENST00000468385 ATP10BO94823 1461 aa22.31■■□□□ 1.16
PTPN7-207ENST00000468385 ILDR1Q86SU0 546 aaPredicted RBP22.31■■□□□ 1.16
PTPN7-207ENST00000468385 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
PTPN7-207ENST00000468385 ARID3CA6NKF2 412 aa22.29■■□□□ 1.16
PTPN7-207ENST00000468385 ARAP3Q8WWN8 1544 aa22.26■■□□□ 1.15
PTPN7-207ENST00000468385 SAMD9Q5K651 1589 aa22.25■■□□□ 1.15
PTPN7-207ENST00000468385 FAM9AQ8IZU1 332 aaPredicted RBP22.25■■□□□ 1.15
PTPN7-207ENST00000468385 KIF21BO75037 1637 aa22.24■■□□□ 1.15
PTPN7-207ENST00000468385 CSRNP3Q8WYN3 585 aa22.23■■□□□ 1.15
PTPN7-207ENST00000468385 ABCA9Q8IUA7 1624 aa22.22■■□□□ 1.15
PTPN7-207ENST00000468385 RAPGEF6Q8TEU7 1601 aa22.19■■□□□ 1.14
PTPN7-207ENST00000468385 PHLDB1Q86UU1 1377 aa22.18■■□□□ 1.14
PTPN7-207ENST00000468385 NEO1Q92859 1461 aa22.14■■□□□ 1.13
PTPN7-207ENST00000468385 RAPGEF3O95398 923 aa22.13■■□□□ 1.13
PTPN7-207ENST00000468385 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
PTPN7-207ENST00000468385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.12■■□□□ 1.13
PTPN7-207ENST00000468385 HNRNPUL2Q1KMD3 747 aaKnown RBP22.12■■□□□ 1.13
PTPN7-207ENST00000468385 EEA1Q15075 1411 aa22.09■■□□□ 1.13
PTPN7-207ENST00000468385 FHOD3Q2V2M9 1422 aa22.09■■□□□ 1.13
PTPN7-207ENST00000468385 ADAMTSL3P82987 1691 aa22.08■■□□□ 1.13
PTPN7-207ENST00000468385 FRMPD1Q5SYB0 1578 aa22.08■■□□□ 1.12
PTPN7-207ENST00000468385 RANGAP1P46060 587 aaPredicted RBP22.07■■□□□ 1.12
PTPN7-207ENST00000468385 PTPRMP28827 1452 aa22.06■■□□□ 1.12
PTPN7-207ENST00000468385 BCORL1Q5H9F3 1711 aa22■■□□□ 1.11
PTPN7-207ENST00000468385 PLEKHD1A6NEE1 506 aa22■■□□□ 1.11
PTPN7-207ENST00000468385 DENND4BO75064 1496 aaPredicted RBP21.97■■□□□ 1.11
PTPN7-207ENST00000468385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.97■■□□□ 1.11
PTPN7-207ENST00000468385 MADDQ8WXG6 1647 aa21.97■■□□□ 1.11
PTPN7-207ENST00000468385 ARID4BQ4LE39 1312 aaPredicted RBP21.97■■□□□ 1.11
PTPN7-207ENST00000468385 AKNAQ7Z591 1439 aa21.97■■□□□ 1.11
PTPN7-207ENST00000468385 EFCAB5A4FU69 1503 aa21.96■■□□□ 1.11
PTPN7-207ENST00000468385 ARHGEF40Q8TER5 1519 aa21.96■■□□□ 1.11
PTPN7-207ENST00000468385 RICTORQ6R327 1708 aa21.95■■□□□ 1.1
PTPN7-207ENST00000468385 FANCAO15360 1455 aa21.95■■□□□ 1.1
PTPN7-207ENST00000468385 TTC37Q6PGP7 1564 aa21.93■■□□□ 1.1
PTPN7-207ENST00000468385 CFAP74Q9C0B2 1584 aa21.92■■□□□ 1.1
PTPN7-207ENST00000468385 PCF11O94913 1555 aaKnown RBP21.89■■□□□ 1.09
PTPN7-207ENST00000468385 CDK13Q14004 1512 aaKnown RBP21.89■■□□□ 1.09
PTPN7-207ENST00000468385 ZMYM4Q5VZL5 1548 aa21.89■■□□□ 1.09
PTPN7-207ENST00000468385 LMTK3Q96Q04 1460 aa21.88■■□□□ 1.09
PTPN7-207ENST00000468385 RIMS1Q86UR5 1692 aaKnown RBP21.87■■□□□ 1.09
PTPN7-207ENST00000468385 YEATS2Q9ULM3 1422 aa21.86■■□□□ 1.09
PTPN7-207ENST00000468385 FBXO41Q8TF61 875 aa21.85■■□□□ 1.09
PTPN7-207ENST00000468385 ZFYVE16Q7Z3T8 1539 aa21.84■■□□□ 1.09
PTPN7-207ENST00000468385 SIGLEC1Q9BZZ2 1709 aa21.83■■□□□ 1.09
PTPN7-207ENST00000468385 MAGI2Q86UL8 1455 aa21.83■■□□□ 1.08
PTPN7-207ENST00000468385 PLCH2O75038 1416 aa21.82■■□□□ 1.08
PTPN7-207ENST00000468385 POGZQ7Z3K3 1410 aa21.81■■□□□ 1.08
PTPN7-207ENST00000468385 HECW1Q76N89 1606 aa21.81■■□□□ 1.08
PTPN7-207ENST00000468385 SCAPERQ9BY12 1400 aa21.8■■□□□ 1.08
PTPN7-207ENST00000468385 ARHGAP35Q9NRY4 1499 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms