RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 CUL7Q14999 1698 aa24.87■■□□□ 1.57
COMMD3-206ENST00000468179 CARMIL1Q5VZK9 1371 aa24.84■■□□□ 1.57
COMMD3-206ENST00000468179 JPH4Q96JJ6 628 aa24.84■■□□□ 1.57
COMMD3-206ENST00000468179 PLPPR3Q6T4P5 718 aa24.82■■□□□ 1.56
COMMD3-206ENST00000468179 SHROOM2Q13796 1616 aa24.79■■□□□ 1.56
COMMD3-206ENST00000468179 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
COMMD3-206ENST00000468179 KIAA0586Q9BVV6 1533 aa24.76■■□□□ 1.55
COMMD3-206ENST00000468179 RUSC2Q8N2Y8 1516 aa24.73■■□□□ 1.55
COMMD3-206ENST00000468179 ERCC6L2Q5T890 1561 aa24.72■■□□□ 1.55
COMMD3-206ENST00000468179 TRHP20396 242 aaPredicted RBP24.71■■□□□ 1.55
COMMD3-206ENST00000468179 RAPGEF2Q9Y4G8 1499 aa24.65■■□□□ 1.54
COMMD3-206ENST00000468179 CARMIL2Q6F5E8 1435 aa24.56■■□□□ 1.52
COMMD3-206ENST00000468179 IQGAP2Q13576 1575 aa24.53■■□□□ 1.52
COMMD3-206ENST00000468179 NPM1P06748 294 aaKnown RBP eCLIP24.52■■□□□ 1.52
COMMD3-206ENST00000468179 CSRNP3Q8WYN3 585 aa24.48■■□□□ 1.51
COMMD3-206ENST00000468179 PTPRGP23470 1445 aa24.48■■□□□ 1.51
COMMD3-206ENST00000468179 TNIKQ9UKE5 1360 aa24.48■■□□□ 1.51
COMMD3-206ENST00000468179 PRXQ9BXM0 1461 aa24.47■■□□□ 1.51
COMMD3-206ENST00000468179 EEA1Q15075 1411 aa24.47■■□□□ 1.51
COMMD3-206ENST00000468179 UGGT2Q9NYU1 1516 aa24.41■■□□□ 1.5
COMMD3-206ENST00000468179 TTBK1Q5TCY1 1321 aaPredicted RBP24.39■■□□□ 1.49
COMMD3-206ENST00000468179 DISP1Q96F81 1524 aa24.36■■□□□ 1.49
COMMD3-206ENST00000468179 GOLGA3Q08378 1498 aa24.33■■□□□ 1.49
COMMD3-206ENST00000468179 ADCY10Q96PN6 1610 aa24.33■■□□□ 1.48
COMMD3-206ENST00000468179 CTTNBP2Q8WZ74 1663 aa24.32■■□□□ 1.48
COMMD3-206ENST00000468179 FAM9AQ8IZU1 332 aaPredicted RBP24.31■■□□□ 1.48
COMMD3-206ENST00000468179 MAPKBP1O60336 1514 aa24.29■■□□□ 1.48
COMMD3-206ENST00000468179 UACAQ9BZF9 1416 aa24.29■■□□□ 1.48
COMMD3-206ENST00000468179 KIAA0556O60303 1618 aa24.27■■□□□ 1.48
COMMD3-206ENST00000468179 UHRF1BP1LA0JNW5 1464 aa24.26■■□□□ 1.47
COMMD3-206ENST00000468179 ABCC2Q92887 1545 aa24.24■■□□□ 1.47
COMMD3-206ENST00000468179 FAM69CQ0P6D2 419 aa24.24■■□□□ 1.47
COMMD3-206ENST00000468179 ABCC10Q5T3U5 1492 aa24.23■■□□□ 1.47
COMMD3-206ENST00000468179 PLB1Q6P1J6 1458 aa24.16■■□□□ 1.46
COMMD3-206ENST00000468179 PIAS4Q8N2W9 510 aaPredicted RBP24.14■■□□□ 1.46
COMMD3-206ENST00000468179 KDM5BQ9UGL1 1544 aa24.13■■□□□ 1.45
COMMD3-206ENST00000468179 PPP6R1Q9UPN7 881 aa24.12■■□□□ 1.45
COMMD3-206ENST00000468179 KIF21BO75037 1637 aa24.11■■□□□ 1.45
COMMD3-206ENST00000468179 KIF13AQ9H1H9 1805 aa24.11■■□□□ 1.45
COMMD3-206ENST00000468179 DIP2BQ9P265 1576 aa24.11■■□□□ 1.45
COMMD3-206ENST00000468179 ASXL2Q76L83 1435 aa24.11■■□□□ 1.45
COMMD3-206ENST00000468179 ADRA2BP18089 450 aa24.1■■□□□ 1.45
COMMD3-206ENST00000468179 MSH5O43196 834 aa24.1■■□□□ 1.45
COMMD3-206ENST00000468179 P3H3Q8IVL6 736 aa24.1■■□□□ 1.45
COMMD3-206ENST00000468179 UBTFP17480 764 aaKnown RBP24.05■■□□□ 1.44
COMMD3-206ENST00000468179 ABCA8O94911 1581 aa24.04■■□□□ 1.44
COMMD3-206ENST00000468179 RANGAP1P46060 587 aaPredicted RBP24.03■■□□□ 1.44
COMMD3-206ENST00000468179 SAMD9Q5K651 1589 aa24.02■■□□□ 1.44
COMMD3-206ENST00000468179 ZCCHC11Q5TAX3 1644 aaKnown RBP24.01■■□□□ 1.43
COMMD3-206ENST00000468179 GLI2P10070 1586 aa23.99■■□□□ 1.43
COMMD3-206ENST00000468179 EPRSP07814 1512 aaKnown RBP23.96■■□□□ 1.43
COMMD3-206ENST00000468179 WDR7Q9Y4E6 1490 aa23.96■■□□□ 1.43
COMMD3-206ENST00000468179 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
COMMD3-206ENST00000468179 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
COMMD3-206ENST00000468179 FHOD3Q2V2M9 1422 aa23.91■■□□□ 1.42
COMMD3-206ENST00000468179 KCNH8Q96L42 1107 aa23.88■■□□□ 1.41
COMMD3-206ENST00000468179 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.87■■□□□ 1.41
COMMD3-206ENST00000468179 HNRNPUL2Q1KMD3 747 aaKnown RBP23.87■■□□□ 1.41
COMMD3-206ENST00000468179 ATP10BO94823 1461 aa23.87■■□□□ 1.41
COMMD3-206ENST00000468179 RAPGEF6Q8TEU7 1601 aa23.87■■□□□ 1.41
COMMD3-206ENST00000468179 ARID3CA6NKF2 412 aa23.86■■□□□ 1.41
COMMD3-206ENST00000468179 TSPOAP1O95153 1857 aa23.86■■□□□ 1.41
COMMD3-206ENST00000468179 TEX14Q8IWB6 1497 aa23.85■■□□□ 1.41
COMMD3-206ENST00000468179 KDM6BO15054 1643 aa23.82■■□□□ 1.4
COMMD3-206ENST00000468179 MAP3K4Q9Y6R4 1608 aa23.81■■□□□ 1.4
COMMD3-206ENST00000468179 CD109Q6YHK3 1445 aa23.8■■□□□ 1.4
COMMD3-206ENST00000468179 NUP153P49790 1475 aaKnown RBP23.78■■□□□ 1.4
COMMD3-206ENST00000468179 FMN1Q68DA7 1419 aa23.78■■□□□ 1.4
COMMD3-206ENST00000468179 PLEKHD1A6NEE1 506 aa23.77■■□□□ 1.4
COMMD3-206ENST00000468179 ARHGAP35Q9NRY4 1499 aa23.75■■□□□ 1.39
COMMD3-206ENST00000468179 PPRC1Q5VV67 1664 aaKnown RBP23.74■■□□□ 1.39
COMMD3-206ENST00000468179 MAGI3Q5TCQ9 1506 aa23.73■■□□□ 1.39
COMMD3-206ENST00000468179 CFAP43Q8NDM7 1665 aa23.73■■□□□ 1.39
COMMD3-206ENST00000468179 ATP1B4Q9UN42 357 aaPredicted RBP23.7■■□□□ 1.38
COMMD3-206ENST00000468179 CDK11AQ9UQ88 783 aaPredicted RBP23.65■■□□□ 1.38
COMMD3-206ENST00000468179 PHLDB1Q86UU1 1377 aa23.65■■□□□ 1.38
COMMD3-206ENST00000468179 ABCA9Q8IUA7 1624 aa23.63■■□□□ 1.37
COMMD3-206ENST00000468179 HECW1Q76N89 1606 aa23.62■■□□□ 1.37
COMMD3-206ENST00000468179 COL17A1Q9UMD9 1497 aaPredicted RBP23.61■■□□□ 1.37
COMMD3-206ENST00000468179 CLIP1P30622 1438 aa23.58■■□□□ 1.37
COMMD3-206ENST00000468179 CDK13Q14004 1512 aaKnown RBP23.56■■□□□ 1.36
COMMD3-206ENST00000468179 NEO1Q92859 1461 aa23.54■■□□□ 1.36
COMMD3-206ENST00000468179 ARAP3Q8WWN8 1544 aa23.53■■□□□ 1.36
COMMD3-206ENST00000468179 CASKIN1Q8WXD9 1431 aa23.52■■□□□ 1.36
COMMD3-206ENST00000468179 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.48■■□□□ 1.35
COMMD3-206ENST00000468179 CCDC18Q5T9S5 1454 aa23.48■■□□□ 1.35
COMMD3-206ENST00000468179 TROQ12816 1431 aaPredicted RBP23.45■■□□□ 1.34
COMMD3-206ENST00000468179 FYCO1Q9BQS8 1478 aa23.44■■□□□ 1.34
COMMD3-206ENST00000468179 FANCAO15360 1455 aa23.43■■□□□ 1.34
COMMD3-206ENST00000468179 PLCH2O75038 1416 aa23.42■■□□□ 1.34
COMMD3-206ENST00000468179 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
COMMD3-206ENST00000468179 PCF11O94913 1555 aaKnown RBP23.42■■□□□ 1.34
COMMD3-206ENST00000468179 CFAP74Q9C0B2 1584 aa23.42■■□□□ 1.34
COMMD3-206ENST00000468179 KDM4FA0A1W2PPD8 638 aa23.41■■□□□ 1.34
COMMD3-206ENST00000468179 RAPGEF3O95398 923 aa23.41■■□□□ 1.34
COMMD3-206ENST00000468179 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
COMMD3-206ENST00000468179 EFCAB2Q5VUJ9 269 aa23.39■■□□□ 1.34
COMMD3-206ENST00000468179 CEP162Q5TB80 1403 aa23.38■■□□□ 1.33
COMMD3-206ENST00000468179 KIF14Q15058 1648 aa23.38■■□□□ 1.33
COMMD3-206ENST00000468179 DENND4BO75064 1496 aaPredicted RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms