RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 RUSC2Q8N2Y8 1516 aa24.5■■□□□ 1.51
RPP40-204ENST00000468105 ABCC10Q5T3U5 1492 aa24.48■■□□□ 1.51
RPP40-204ENST00000468105 FAM69CQ0P6D2 419 aa24.47■■□□□ 1.51
RPP40-204ENST00000468105 ADCY10Q96PN6 1610 aa24.45■■□□□ 1.5
RPP40-204ENST00000468105 DIP2BQ9P265 1576 aa24.43■■□□□ 1.5
RPP40-204ENST00000468105 MAPKBP1O60336 1514 aa24.4■■□□□ 1.5
RPP40-204ENST00000468105 KDM4FA0A1W2PPD8 638 aa24.39■■□□□ 1.49
RPP40-204ENST00000468105 IGF1RP08069 1367 aa24.3■■□□□ 1.48
RPP40-204ENST00000468105 TSPOAP1O95153 1857 aa24.29■■□□□ 1.48
RPP40-204ENST00000468105 NPM1P06748 294 aaKnown RBP eCLIP24.28■■□□□ 1.48
RPP40-204ENST00000468105 KIAA0586Q9BVV6 1533 aa24.28■■□□□ 1.48
RPP40-204ENST00000468105 KDM6BO15054 1643 aa24.26■■□□□ 1.47
RPP40-204ENST00000468105 TTBK1Q5TCY1 1321 aaPredicted RBP24.16■■□□□ 1.46
RPP40-204ENST00000468105 PPRC1Q5VV67 1664 aaKnown RBP24.15■■□□□ 1.46
RPP40-204ENST00000468105 PTPRGP23470 1445 aa24.14■■□□□ 1.45
RPP40-204ENST00000468105 CUL7Q14999 1698 aa24.12■■□□□ 1.45
RPP40-204ENST00000468105 KIF27Q86VH2 1401 aa24.12■■□□□ 1.45
RPP40-204ENST00000468105 COL17A1Q9UMD9 1497 aaPredicted RBP24.09■■□□□ 1.45
RPP40-204ENST00000468105 ABCC2Q92887 1545 aa24.08■■□□□ 1.45
RPP40-204ENST00000468105 ASXL2Q76L83 1435 aa24.08■■□□□ 1.44
RPP40-204ENST00000468105 CARMIL1Q5VZK9 1371 aa24.06■■□□□ 1.44
RPP40-204ENST00000468105 ILDR1Q86SU0 546 aaPredicted RBP24.05■■□□□ 1.44
RPP40-204ENST00000468105 TNIKQ9UKE5 1360 aa24.04■■□□□ 1.44
RPP40-204ENST00000468105 GLI2P10070 1586 aa24.02■■□□□ 1.44
RPP40-204ENST00000468105 DISP1Q96F81 1524 aa24.01■■□□□ 1.43
RPP40-204ENST00000468105 UHRF1BP1LA0JNW5 1464 aa23.98■■□□□ 1.43
RPP40-204ENST00000468105 ADGRL1O94910 1474 aa23.98■■□□□ 1.43
RPP40-204ENST00000468105 IQGAP2Q13576 1575 aa23.97■■□□□ 1.43
RPP40-204ENST00000468105 PLB1Q6P1J6 1458 aa23.97■■□□□ 1.43
RPP40-204ENST00000468105 CARMIL2Q6F5E8 1435 aa23.95■■□□□ 1.42
RPP40-204ENST00000468105 UACAQ9BZF9 1416 aa23.95■■□□□ 1.42
RPP40-204ENST00000468105 EPRSP07814 1512 aaKnown RBP23.94■■□□□ 1.42
RPP40-204ENST00000468105 MAP3K4Q9Y6R4 1608 aa23.92■■□□□ 1.42
RPP40-204ENST00000468105 KDM5BQ9UGL1 1544 aa23.91■■□□□ 1.42
RPP40-204ENST00000468105 ZCCHC11Q5TAX3 1644 aaKnown RBP23.87■■□□□ 1.41
RPP40-204ENST00000468105 UGGT2Q9NYU1 1516 aa23.84■■□□□ 1.41
RPP40-204ENST00000468105 HECW2Q9P2P5 1572 aa23.81■■□□□ 1.4
RPP40-204ENST00000468105 KIAA0556O60303 1618 aa23.81■■□□□ 1.4
RPP40-204ENST00000468105 RAPGEF2Q9Y4G8 1499 aa23.76■■□□□ 1.39
RPP40-204ENST00000468105 TEX14Q8IWB6 1497 aa23.73■■□□□ 1.39
RPP40-204ENST00000468105 WDR7Q9Y4E6 1490 aa23.73■■□□□ 1.39
RPP40-204ENST00000468105 ABCA8O94911 1581 aa23.65■■□□□ 1.38
RPP40-204ENST00000468105 KCNH8Q96L42 1107 aa23.64■■□□□ 1.37
RPP40-204ENST00000468105 MAGI3Q5TCQ9 1506 aa23.64■■□□□ 1.37
RPP40-204ENST00000468105 CD109Q6YHK3 1445 aa23.63■■□□□ 1.37
RPP40-204ENST00000468105 CFAP43Q8NDM7 1665 aa23.59■■□□□ 1.37
RPP40-204ENST00000468105 CTTNBP2Q8WZ74 1663 aa23.59■■□□□ 1.37
RPP40-204ENST00000468105 KIF21BO75037 1637 aa23.58■■□□□ 1.36
RPP40-204ENST00000468105 ARID3CA6NKF2 412 aa23.53■■□□□ 1.36
RPP40-204ENST00000468105 PRXQ9BXM0 1461 aa23.49■■□□□ 1.35
RPP40-204ENST00000468105 GOLGA3Q08378 1498 aa23.48■■□□□ 1.35
RPP40-204ENST00000468105 ATP10BO94823 1461 aa23.47■■□□□ 1.35
RPP40-204ENST00000468105 ARAP3Q8WWN8 1544 aa23.47■■□□□ 1.35
RPP40-204ENST00000468105 P3H3Q8IVL6 736 aa23.45■■□□□ 1.34
RPP40-204ENST00000468105 ADAMTSL3P82987 1691 aa23.41■■□□□ 1.34
RPP40-204ENST00000468105 RAPGEF3O95398 923 aa23.4■■□□□ 1.34
RPP40-204ENST00000468105 PTPRMP28827 1452 aa23.39■■□□□ 1.34
RPP40-204ENST00000468105 ABCA9Q8IUA7 1624 aa23.37■■□□□ 1.33
RPP40-204ENST00000468105 FRMPD1Q5SYB0 1578 aa23.36■■□□□ 1.33
RPP40-204ENST00000468105 FBXO41Q8TF61 875 aa23.32■■□□□ 1.32
RPP40-204ENST00000468105 SAMD9Q5K651 1589 aa23.29■■□□□ 1.32
RPP40-204ENST00000468105 MADDQ8WXG6 1647 aa23.29■■□□□ 1.32
RPP40-204ENST00000468105 BCORL1Q5H9F3 1711 aa23.28■■□□□ 1.32
RPP40-204ENST00000468105 LMTK3Q96Q04 1460 aa23.25■■□□□ 1.31
RPP40-204ENST00000468105 RAPGEF6Q8TEU7 1601 aa23.25■■□□□ 1.31
RPP40-204ENST00000468105 NUP153P49790 1475 aaKnown RBP23.24■■□□□ 1.31
RPP40-204ENST00000468105 NEO1Q92859 1461 aa23.24■■□□□ 1.31
RPP40-204ENST00000468105 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
RPP40-204ENST00000468105 SIGLEC1Q9BZZ2 1709 aa23.22■■□□□ 1.31
RPP40-204ENST00000468105 PCF11O94913 1555 aaKnown RBP23.21■■□□□ 1.31
RPP40-204ENST00000468105 RICTORQ6R327 1708 aa23.16■■□□□ 1.3
RPP40-204ENST00000468105 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
RPP40-204ENST00000468105 ARID4BQ4LE39 1312 aaPredicted RBP23.16■■□□□ 1.3
RPP40-204ENST00000468105 FHOD3Q2V2M9 1422 aa23.16■■□□□ 1.3
RPP40-204ENST00000468105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.15■■□□□ 1.3
RPP40-204ENST00000468105 HSPA2P54652 639 aa23.15■■□□□ 1.3
RPP40-204ENST00000468105 HNRNPUL2Q1KMD3 747 aaKnown RBP23.15■■□□□ 1.3
RPP40-204ENST00000468105 ARHGEF40Q8TER5 1519 aa23.14■■□□□ 1.3
RPP40-204ENST00000468105 RANGAP1P46060 587 aaPredicted RBP23.14■■□□□ 1.29
RPP40-204ENST00000468105 CSRNP3Q8WYN3 585 aa23.14■■□□□ 1.29
RPP40-204ENST00000468105 AKNAQ7Z591 1439 aa23.1■■□□□ 1.29
RPP40-204ENST00000468105 YEATS2Q9ULM3 1422 aa23.1■■□□□ 1.29
RPP40-204ENST00000468105 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.1■■□□□ 1.29
RPP40-204ENST00000468105 DENND4BO75064 1496 aaPredicted RBP23.1■■□□□ 1.29
RPP40-204ENST00000468105 PLPPR3Q6T4P5 718 aa23.08■■□□□ 1.29
RPP40-204ENST00000468105 TTC37Q6PGP7 1564 aa23.08■■□□□ 1.29
RPP40-204ENST00000468105 FANCAO15360 1455 aa23.05■■□□□ 1.28
RPP40-204ENST00000468105 ZMYM4Q5VZL5 1548 aa23.03■■□□□ 1.28
RPP40-204ENST00000468105 PLEKHD1A6NEE1 506 aa23.02■■□□□ 1.28
RPP40-204ENST00000468105 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
RPP40-204ENST00000468105 HECW1Q76N89 1606 aa23■■□□□ 1.27
RPP40-204ENST00000468105 CDK13Q14004 1512 aaKnown RBP22.99■■□□□ 1.27
RPP40-204ENST00000468105 MLECQ14165 292 aa22.99■■□□□ 1.27
RPP40-204ENST00000468105 ZFYVE16Q7Z3T8 1539 aa22.98■■□□□ 1.27
RPP40-204ENST00000468105 CFAP74Q9C0B2 1584 aa22.93■■□□□ 1.26
RPP40-204ENST00000468105 CERKQ8TCT0 537 aa22.93■■□□□ 1.26
RPP40-204ENST00000468105 SCAPERQ9BY12 1400 aa22.92■■□□□ 1.26
RPP40-204ENST00000468105 EFCAB5A4FU69 1503 aa22.92■■□□□ 1.26
RPP40-204ENST00000468105 POGZQ7Z3K3 1410 aa22.91■■□□□ 1.26
RPP40-204ENST00000468105 FER1L4A9Z1Z3 1794 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms