RNA–Protein interactions for RNA: ENST00000468080.1

GPM6B-206, Transcript of glycoprotein M6B, humanhuman

TSL 4

Gene GPM6B, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-206ENST00000468080 NPM1P06748 294 aaKnown RBP eCLIP22.67■■□□□ 1.22
GPM6B-206ENST00000468080 DIP2BQ9P265 1576 aa22.63■■□□□ 1.21
GPM6B-206ENST00000468080 MAPKBP1O60336 1514 aa22.62■■□□□ 1.21
GPM6B-206ENST00000468080 ERICH3Q5RHP9 1530 aa22.62■■□□□ 1.21
GPM6B-206ENST00000468080 KDM6BO15054 1643 aa22.6■■□□□ 1.21
GPM6B-206ENST00000468080 TOP2BQ02880 1626 aa22.57■■□□□ 1.2
GPM6B-206ENST00000468080 ADCY10Q96PN6 1610 aa22.56■■□□□ 1.2
GPM6B-206ENST00000468080 BIVM-ERCC5R4GMW8 1640 aa22.55■■□□□ 1.2
GPM6B-206ENST00000468080 TSPOAP1O95153 1857 aa22.55■■□□□ 1.2
GPM6B-206ENST00000468080 RUSC2Q8N2Y8 1516 aa22.51■■□□□ 1.19
GPM6B-206ENST00000468080 SUPT5HO00267 1087 aaKnown RBP22.41■■□□□ 1.18
GPM6B-206ENST00000468080 ADGRL1O94910 1474 aa22.36■■□□□ 1.17
GPM6B-206ENST00000468080 KIAA0586Q9BVV6 1533 aa22.36■■□□□ 1.17
GPM6B-206ENST00000468080 TTBK1Q5TCY1 1321 aaPredicted RBP22.34■■□□□ 1.17
GPM6B-206ENST00000468080 PTPRGP23470 1445 aa22.31■■□□□ 1.16
GPM6B-206ENST00000468080 PPRC1Q5VV67 1664 aaKnown RBP22.3■■□□□ 1.16
GPM6B-206ENST00000468080 ASXL2Q76L83 1435 aa22.27■■□□□ 1.16
GPM6B-206ENST00000468080 COL17A1Q9UMD9 1497 aaPredicted RBP22.27■■□□□ 1.16
GPM6B-206ENST00000468080 IGF1RP08069 1367 aa22.26■■□□□ 1.15
GPM6B-206ENST00000468080 HECW2Q9P2P5 1572 aa22.26■■□□□ 1.15
GPM6B-206ENST00000468080 ABCC2Q92887 1545 aa22.25■■□□□ 1.15
GPM6B-206ENST00000468080 GLI2P10070 1586 aa22.24■■□□□ 1.15
GPM6B-206ENST00000468080 PLB1Q6P1J6 1458 aa22.22■■□□□ 1.15
GPM6B-206ENST00000468080 TNIKQ9UKE5 1360 aa22.2■■□□□ 1.14
GPM6B-206ENST00000468080 CUL7Q14999 1698 aa22.15■■□□□ 1.14
GPM6B-206ENST00000468080 CARMIL2Q6F5E8 1435 aa22.14■■□□□ 1.13
GPM6B-206ENST00000468080 UHRF1BP1LA0JNW5 1464 aa22.12■■□□□ 1.13
GPM6B-206ENST00000468080 KIF27Q86VH2 1401 aa22.12■■□□□ 1.13
GPM6B-206ENST00000468080 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
GPM6B-206ENST00000468080 UACAQ9BZF9 1416 aa22.11■■□□□ 1.13
GPM6B-206ENST00000468080 MAP3K4Q9Y6R4 1608 aa22.09■■□□□ 1.13
GPM6B-206ENST00000468080 CARMIL1Q5VZK9 1371 aa22.07■■□□□ 1.12
GPM6B-206ENST00000468080 TEX14Q8IWB6 1497 aa22.06■■□□□ 1.12
GPM6B-206ENST00000468080 KDM5BQ9UGL1 1544 aa22.04■■□□□ 1.12
GPM6B-206ENST00000468080 FBXO41Q8TF61 875 aa22.03■■□□□ 1.12
GPM6B-206ENST00000468080 DISP1Q96F81 1524 aa22.02■■□□□ 1.12
GPM6B-206ENST00000468080 IQGAP2Q13576 1575 aa22.01■■□□□ 1.11
GPM6B-206ENST00000468080 ZCCHC11Q5TAX3 1644 aaKnown RBP21.98■■□□□ 1.11
GPM6B-206ENST00000468080 WDR7Q9Y4E6 1490 aa21.9■■□□□ 1.1
GPM6B-206ENST00000468080 KCNH8Q96L42 1107 aa21.89■■□□□ 1.09
GPM6B-206ENST00000468080 CD109Q6YHK3 1445 aa21.88■■□□□ 1.09
GPM6B-206ENST00000468080 UGGT2Q9NYU1 1516 aa21.87■■□□□ 1.09
GPM6B-206ENST00000468080 MAGI3Q5TCQ9 1506 aa21.86■■□□□ 1.09
GPM6B-206ENST00000468080 KIF21BO75037 1637 aa21.84■■□□□ 1.09
GPM6B-206ENST00000468080 KIAA0556O60303 1618 aa21.84■■□□□ 1.09
GPM6B-206ENST00000468080 CFAP43Q8NDM7 1665 aa21.8■■□□□ 1.08
GPM6B-206ENST00000468080 RAPGEF2Q9Y4G8 1499 aa21.77■■□□□ 1.07
GPM6B-206ENST00000468080 PTPRMP28827 1452 aa21.76■■□□□ 1.07
GPM6B-206ENST00000468080 ARAP3Q8WWN8 1544 aa21.71■■□□□ 1.07
GPM6B-206ENST00000468080 ABCA8O94911 1581 aa21.7■■□□□ 1.06
GPM6B-206ENST00000468080 ADAMTSL3P82987 1691 aa21.7■■□□□ 1.06
GPM6B-206ENST00000468080 ARID3CA6NKF2 412 aa21.65■■□□□ 1.06
GPM6B-206ENST00000468080 RAPGEF3O95398 923 aa21.65■■□□□ 1.06
GPM6B-206ENST00000468080 PCF11O94913 1555 aaKnown RBP21.62■■□□□ 1.05
GPM6B-206ENST00000468080 LMTK3Q96Q04 1460 aa21.62■■□□□ 1.05
GPM6B-206ENST00000468080 GOLGA3Q08378 1498 aa21.61■■□□□ 1.05
GPM6B-206ENST00000468080 ARID4BQ4LE39 1312 aaPredicted RBP21.59■■□□□ 1.05
GPM6B-206ENST00000468080 CTTNBP2Q8WZ74 1663 aa21.58■■□□□ 1.05
GPM6B-206ENST00000468080 MADDQ8WXG6 1647 aa21.58■■□□□ 1.04
GPM6B-206ENST00000468080 BCORL1Q5H9F3 1711 aa21.58■■□□□ 1.04
GPM6B-206ENST00000468080 PHLDB1Q86UU1 1377 aa21.57■■□□□ 1.04
GPM6B-206ENST00000468080 HSPA2P54652 639 aa21.56■■□□□ 1.04
GPM6B-206ENST00000468080 ATP10BO94823 1461 aa21.56■■□□□ 1.04
GPM6B-206ENST00000468080 ABCA9Q8IUA7 1624 aa21.52■■□□□ 1.04
GPM6B-206ENST00000468080 P3H3Q8IVL6 736 aa21.51■■□□□ 1.03
GPM6B-206ENST00000468080 CERKQ8TCT0 537 aa21.51■■□□□ 1.03
GPM6B-206ENST00000468080 FRMPD1Q5SYB0 1578 aa21.5■■□□□ 1.03
GPM6B-206ENST00000468080 PLPPR3Q6T4P5 718 aa21.5■■□□□ 1.03
GPM6B-206ENST00000468080 ILDR2Q71H61 639 aa21.49■■□□□ 1.03
GPM6B-206ENST00000468080 NEO1Q92859 1461 aa21.49■■□□□ 1.03
GPM6B-206ENST00000468080 RIMS1Q86UR5 1692 aaKnown RBP21.49■■□□□ 1.03
GPM6B-206ENST00000468080 FAM9AQ8IZU1 332 aaPredicted RBP21.44■■□□□ 1.02
GPM6B-206ENST00000468080 DISP3Q9P2K9 1392 aa21.4■■□□□ 1.02
GPM6B-206ENST00000468080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.4■■□□□ 1.02
GPM6B-206ENST00000468080 SOCS7O14512 581 aa21.4■■□□□ 1.02
GPM6B-206ENST00000468080 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
GPM6B-206ENST00000468080 PRXQ9BXM0 1461 aa21.39■■□□□ 1.01
GPM6B-206ENST00000468080 ARHGEF40Q8TER5 1519 aa21.38■■□□□ 1.01
GPM6B-206ENST00000468080 DENND4BO75064 1496 aaPredicted RBP21.35■■□□□ 1.01
GPM6B-206ENST00000468080 MLECQ14165 292 aa21.34■■□□□ 1.01
GPM6B-206ENST00000468080 RICTORQ6R327 1708 aa21.34■■□□□ 1.01
GPM6B-206ENST00000468080 SIGLEC1Q9BZZ2 1709 aa21.33■■□□□ 1.01
GPM6B-206ENST00000468080 FHOD3Q2V2M9 1422 aa21.32■■□□□ 1
GPM6B-206ENST00000468080 AKNAQ7Z591 1439 aa21.32■■□□□ 1
GPM6B-206ENST00000468080 RAPGEF6Q8TEU7 1601 aa21.32■■□□□ 1
GPM6B-206ENST00000468080 POGZQ7Z3K3 1410 aa21.31■■□□□ 1
GPM6B-206ENST00000468080 YEATS2Q9ULM3 1422 aa21.3■■□□□ 1
GPM6B-206ENST00000468080 FANCAO15360 1455 aa21.3■■□□□ 1
GPM6B-206ENST00000468080 NUP153P49790 1475 aaKnown RBP21.27■■□□□ 1
GPM6B-206ENST00000468080 PLEKHD1A6NEE1 506 aa21.26■□□□□ 0.99
GPM6B-206ENST00000468080 SAMD9Q5K651 1589 aa21.25■□□□□ 0.99
GPM6B-206ENST00000468080 ZFYVE16Q7Z3T8 1539 aa21.24■□□□□ 0.99
GPM6B-206ENST00000468080 CEBPAP49715 358 aaPredicted RBP21.23■□□□□ 0.99
GPM6B-206ENST00000468080 ZMYM4Q5VZL5 1548 aa21.23■□□□□ 0.99
GPM6B-206ENST00000468080 FER1L4A9Z1Z3 1794 aa21.23■□□□□ 0.99
GPM6B-206ENST00000468080 TTC37Q6PGP7 1564 aa21.22■□□□□ 0.99
GPM6B-206ENST00000468080 EFCAB5A4FU69 1503 aa21.21■□□□□ 0.99
GPM6B-206ENST00000468080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.2■□□□□ 0.98
GPM6B-206ENST00000468080 RANGAP1P46060 587 aaPredicted RBP21.2■□□□□ 0.98
GPM6B-206ENST00000468080 MAGI2Q86UL8 1455 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms