RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
VPS26A-204ENST00000467852 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
VPS26A-204ENST00000467852 MAPKBP1O60336 1514 aa22.21■■□□□ 1.15
VPS26A-204ENST00000467852 NUP160Q12769 1436 aa22.2■■□□□ 1.14
VPS26A-204ENST00000467852 CUX1P39880 1505 aa22.16■■□□□ 1.14
VPS26A-204ENST00000467852 LMTK3Q96Q04 1460 aa22.15■■□□□ 1.14
VPS26A-204ENST00000467852 PRG4Q92954 1404 aaPredicted RBP22.14■■□□□ 1.13
VPS26A-204ENST00000467852 ABCA5Q8WWZ7 1642 aa22.13■■□□□ 1.13
VPS26A-204ENST00000467852 ABCA10Q8WWZ4 1543 aa22.08■■□□□ 1.13
VPS26A-204ENST00000467852 JPH4Q96JJ6 628 aa22.06■■□□□ 1.12
VPS26A-204ENST00000467852 ADAMTS12P58397 1594 aa22.05■■□□□ 1.12
VPS26A-204ENST00000467852 ADCY10Q96PN6 1610 aa22■■□□□ 1.11
VPS26A-204ENST00000467852 SOCS7O14512 581 aa22■■□□□ 1.11
VPS26A-204ENST00000467852 FHAD1B1AJZ9 1412 aa21.98■■□□□ 1.11
VPS26A-204ENST00000467852 TOP2BQ02880 1626 aa21.88■■□□□ 1.09
VPS26A-204ENST00000467852 ILDR2Q71H61 639 aa21.86■■□□□ 1.09
VPS26A-204ENST00000467852 PPRC1Q5VV67 1664 aaKnown RBP21.85■■□□□ 1.09
VPS26A-204ENST00000467852 COL17A1Q9UMD9 1497 aaPredicted RBP21.8■■□□□ 1.08
VPS26A-204ENST00000467852 DISP3Q9P2K9 1392 aa21.8■■□□□ 1.08
VPS26A-204ENST00000467852 GLI2P10070 1586 aa21.79■■□□□ 1.08
VPS26A-204ENST00000467852 ERICH3Q5RHP9 1530 aa21.79■■□□□ 1.08
VPS26A-204ENST00000467852 WRNQ14191 1432 aaPredicted RBP eCLIP21.79■■□□□ 1.08
VPS26A-204ENST00000467852 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
VPS26A-204ENST00000467852 PLB1Q6P1J6 1458 aa21.74■■□□□ 1.07
VPS26A-204ENST00000467852 ASXL2Q76L83 1435 aa21.72■■□□□ 1.07
VPS26A-204ENST00000467852 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
VPS26A-204ENST00000467852 TEX14Q8IWB6 1497 aa21.71■■□□□ 1.07
VPS26A-204ENST00000467852 ABCC2Q92887 1545 aa21.66■■□□□ 1.06
VPS26A-204ENST00000467852 PTPRGP23470 1445 aa21.65■■□□□ 1.06
VPS26A-204ENST00000467852 TTBK1Q5TCY1 1321 aaPredicted RBP21.62■■□□□ 1.05
VPS26A-204ENST00000467852 MAP3K4Q9Y6R4 1608 aa21.62■■□□□ 1.05
VPS26A-204ENST00000467852 CUL7Q14999 1698 aa21.58■■□□□ 1.05
VPS26A-204ENST00000467852 EPRSP07814 1512 aaKnown RBP21.57■■□□□ 1.04
VPS26A-204ENST00000467852 KIAA0586Q9BVV6 1533 aa21.57■■□□□ 1.04
VPS26A-204ENST00000467852 CERKQ8TCT0 537 aa21.56■■□□□ 1.04
VPS26A-204ENST00000467852 PTPRMP28827 1452 aa21.52■■□□□ 1.03
VPS26A-204ENST00000467852 KIF21BO75037 1637 aa21.51■■□□□ 1.03
VPS26A-204ENST00000467852 BIVM-ERCC5R4GMW8 1640 aa21.5■■□□□ 1.03
VPS26A-204ENST00000467852 TNIKQ9UKE5 1360 aa21.49■■□□□ 1.03
VPS26A-204ENST00000467852 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
VPS26A-204ENST00000467852 UHRF1BP1LA0JNW5 1464 aa21.47■■□□□ 1.03
VPS26A-204ENST00000467852 CARMIL2Q6F5E8 1435 aa21.46■■□□□ 1.03
VPS26A-204ENST00000467852 SPATA31D1Q6ZQQ2 1576 aa21.45■■□□□ 1.02
VPS26A-204ENST00000467852 UACAQ9BZF9 1416 aa21.42■■□□□ 1.02
VPS26A-204ENST00000467852 ADAMTSL3P82987 1691 aa21.4■■□□□ 1.02
VPS26A-204ENST00000467852 KDM5BQ9UGL1 1544 aa21.38■■□□□ 1.01
VPS26A-204ENST00000467852 CD109Q6YHK3 1445 aa21.34■■□□□ 1.01
VPS26A-204ENST00000467852 MAGI3Q5TCQ9 1506 aa21.34■■□□□ 1.01
VPS26A-204ENST00000467852 ZCCHC11Q5TAX3 1644 aaKnown RBP21.33■■□□□ 1.01
VPS26A-204ENST00000467852 HSPA2P54652 639 aa21.33■■□□□ 1.01
VPS26A-204ENST00000467852 CFAP43Q8NDM7 1665 aa21.3■■□□□ 1
VPS26A-204ENST00000467852 WDR7Q9Y4E6 1490 aa21.29■■□□□ 1
VPS26A-204ENST00000467852 POTEDQ86YR6 584 aa21.29■■□□□ 1
VPS26A-204ENST00000467852 MADDQ8WXG6 1647 aa21.25■□□□□ 0.99
VPS26A-204ENST00000467852 ARID4BQ4LE39 1312 aaPredicted RBP21.25■□□□□ 0.99
VPS26A-204ENST00000467852 BCORL1Q5H9F3 1711 aa21.24■□□□□ 0.99
VPS26A-204ENST00000467852 KCNH8Q96L42 1107 aa21.24■□□□□ 0.99
VPS26A-204ENST00000467852 IGF1RP08069 1367 aa21.23■□□□□ 0.99
VPS26A-204ENST00000467852 ARAP3Q8WWN8 1544 aa21.22■□□□□ 0.99
VPS26A-204ENST00000467852 IQGAP2Q13576 1575 aa21.18■□□□□ 0.98
VPS26A-204ENST00000467852 RIMS1Q86UR5 1692 aaKnown RBP21.17■□□□□ 0.98
VPS26A-204ENST00000467852 DISP1Q96F81 1524 aa21.14■□□□□ 0.98
VPS26A-204ENST00000467852 MSH5O43196 834 aa21.1■□□□□ 0.97
VPS26A-204ENST00000467852 DMRT2Q9Y5R5 561 aa21.1■□□□□ 0.97
VPS26A-204ENST00000467852 PHLDB1Q86UU1 1377 aa21.1■□□□□ 0.97
VPS26A-204ENST00000467852 KIF27Q86VH2 1401 aa21.09■□□□□ 0.97
VPS26A-204ENST00000467852 RAPGEF3O95398 923 aa21.08■□□□□ 0.97
VPS26A-204ENST00000467852 CARMIL1Q5VZK9 1371 aa21.08■□□□□ 0.96
VPS26A-204ENST00000467852 YEATS2Q9ULM3 1422 aa21■□□□□ 0.95
VPS26A-204ENST00000467852 KIAA0556O60303 1618 aa20.99■□□□□ 0.95
VPS26A-204ENST00000467852 UGGT2Q9NYU1 1516 aa20.99■□□□□ 0.95
VPS26A-204ENST00000467852 POGZQ7Z3K3 1410 aa20.97■□□□□ 0.95
VPS26A-204ENST00000467852 PIAS4Q8N2W9 510 aaPredicted RBP20.95■□□□□ 0.94
VPS26A-204ENST00000467852 NEO1Q92859 1461 aa20.92■□□□□ 0.94
VPS26A-204ENST00000467852 STRCQ7RTU9 1775 aa20.92■□□□□ 0.94
VPS26A-204ENST00000467852 PREX1Q8TCU6 1659 aa20.9■□□□□ 0.94
VPS26A-204ENST00000467852 FANCAO15360 1455 aa20.9■□□□□ 0.94
VPS26A-204ENST00000467852 IQSEC2Q5JU85 1478 aa20.89■□□□□ 0.94
VPS26A-204ENST00000467852 FRMPD1Q5SYB0 1578 aa20.89■□□□□ 0.93
VPS26A-204ENST00000467852 ARHGEF40Q8TER5 1519 aa20.88■□□□□ 0.93
VPS26A-204ENST00000467852 PPP6R1Q9UPN7 881 aa20.88■□□□□ 0.93
VPS26A-204ENST00000467852 ABCA9Q8IUA7 1624 aa20.87■□□□□ 0.93
VPS26A-204ENST00000467852 ABCA8O94911 1581 aa20.87■□□□□ 0.93
VPS26A-204ENST00000467852 FER1L4A9Z1Z3 1794 aa20.86■□□□□ 0.93
VPS26A-204ENST00000467852 MLECQ14165 292 aa20.85■□□□□ 0.93
VPS26A-204ENST00000467852 PTPRTO14522 1441 aa20.84■□□□□ 0.93
VPS26A-204ENST00000467852 TTC37Q6PGP7 1564 aa20.84■□□□□ 0.93
VPS26A-204ENST00000467852 AKNAQ7Z591 1439 aa20.83■□□□□ 0.93
VPS26A-204ENST00000467852 LTBP4Q8N2S1 1624 aa20.81■□□□□ 0.92
VPS26A-204ENST00000467852 SETD1BQ9UPS6 1966 aaKnown RBP20.8■□□□□ 0.92
VPS26A-204ENST00000467852 ADRA2BP18089 450 aa20.79■□□□□ 0.92
VPS26A-204ENST00000467852 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
VPS26A-204ENST00000467852 SUPT5HO00267 1087 aaKnown RBP20.78■□□□□ 0.92
VPS26A-204ENST00000467852 FAM9AQ8IZU1 332 aaPredicted RBP20.78■□□□□ 0.92
VPS26A-204ENST00000467852 GOLGA3Q08378 1498 aa20.77■□□□□ 0.92
VPS26A-204ENST00000467852 ARID3CA6NKF2 412 aa20.77■□□□□ 0.92
VPS26A-204ENST00000467852 UBAP1LF5GYI3 381 aa20.77■□□□□ 0.92
VPS26A-204ENST00000467852 UHRF1BP1Q6BDS2 1440 aa20.77■□□□□ 0.91
VPS26A-204ENST00000467852 RICTORQ6R327 1708 aa20.75■□□□□ 0.91
VPS26A-204ENST00000467852 CEBPAP49715 358 aaPredicted RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 178 ms