RNA–Protein interactions for RNA: ENST00000467514.1

PRPF3-203, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 3

Gene PRPF3, Length 1,097 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-203ENST00000467514 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
PRPF3-203ENST00000467514 KDM6BO15054 1643 aa19.16■□□□□ 0.66
PRPF3-203ENST00000467514 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
PRPF3-203ENST00000467514 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
PRPF3-203ENST00000467514 TSPOAP1O95153 1857 aa19.14■□□□□ 0.65
PRPF3-203ENST00000467514 DIP2BQ9P265 1576 aa19.13■□□□□ 0.65
PRPF3-203ENST00000467514 MAPKBP1O60336 1514 aa19.11■□□□□ 0.65
PRPF3-203ENST00000467514 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
PRPF3-203ENST00000467514 ADCY10Q96PN6 1610 aa19.07■□□□□ 0.64
PRPF3-203ENST00000467514 KDM4FA0A1W2PPD8 638 aa19.03■□□□□ 0.64
PRPF3-203ENST00000467514 TTBK1Q5TCY1 1321 aaPredicted RBP19■□□□□ 0.63
PRPF3-203ENST00000467514 ILDR1Q86SU0 546 aaPredicted RBP18.99■□□□□ 0.63
PRPF3-203ENST00000467514 KIAA0586Q9BVV6 1533 aa18.92■□□□□ 0.62
PRPF3-203ENST00000467514 CUL7Q14999 1698 aa18.89■□□□□ 0.61
PRPF3-203ENST00000467514 PTPRGP23470 1445 aa18.88■□□□□ 0.61
PRPF3-203ENST00000467514 ADGRL1O94910 1474 aa18.87■□□□□ 0.61
PRPF3-203ENST00000467514 CARMIL2Q6F5E8 1435 aa18.84■□□□□ 0.61
PRPF3-203ENST00000467514 KIF27Q86VH2 1401 aa18.83■□□□□ 0.61
PRPF3-203ENST00000467514 ABCC2Q92887 1545 aa18.83■□□□□ 0.6
PRPF3-203ENST00000467514 ASXL2Q76L83 1435 aa18.83■□□□□ 0.6
PRPF3-203ENST00000467514 PLB1Q6P1J6 1458 aa18.82■□□□□ 0.6
PRPF3-203ENST00000467514 PPRC1Q5VV67 1664 aaKnown RBP18.8■□□□□ 0.6
PRPF3-203ENST00000467514 TNIKQ9UKE5 1360 aa18.8■□□□□ 0.6
PRPF3-203ENST00000467514 GLI2P10070 1586 aa18.77■□□□□ 0.6
PRPF3-203ENST00000467514 HECW2Q9P2P5 1572 aa18.77■□□□□ 0.6
PRPF3-203ENST00000467514 IGF1RP08069 1367 aa18.77■□□□□ 0.6
PRPF3-203ENST00000467514 IQGAP2Q13576 1575 aa18.75■□□□□ 0.59
PRPF3-203ENST00000467514 TEX14Q8IWB6 1497 aa18.74■□□□□ 0.59
PRPF3-203ENST00000467514 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
PRPF3-203ENST00000467514 UACAQ9BZF9 1416 aa18.71■□□□□ 0.59
PRPF3-203ENST00000467514 MAP3K4Q9Y6R4 1608 aa18.7■□□□□ 0.58
PRPF3-203ENST00000467514 UHRF1BP1LA0JNW5 1464 aa18.69■□□□□ 0.58
PRPF3-203ENST00000467514 EPRSP07814 1512 aaKnown RBP18.69■□□□□ 0.58
PRPF3-203ENST00000467514 ZCCHC11Q5TAX3 1644 aaKnown RBP18.67■□□□□ 0.58
PRPF3-203ENST00000467514 COL17A1Q9UMD9 1497 aaPredicted RBP18.65■□□□□ 0.58
PRPF3-203ENST00000467514 KDM5BQ9UGL1 1544 aa18.62■□□□□ 0.57
PRPF3-203ENST00000467514 DISP1Q96F81 1524 aa18.6■□□□□ 0.57
PRPF3-203ENST00000467514 CHIC1Q5VXU3 224 aa18.58■□□□□ 0.56
PRPF3-203ENST00000467514 WDR7Q9Y4E6 1490 aa18.58■□□□□ 0.56
PRPF3-203ENST00000467514 KIAA0556O60303 1618 aa18.56■□□□□ 0.56
PRPF3-203ENST00000467514 UGGT2Q9NYU1 1516 aa18.54■□□□□ 0.56
PRPF3-203ENST00000467514 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
PRPF3-203ENST00000467514 KIF21BO75037 1637 aa18.52■□□□□ 0.56
PRPF3-203ENST00000467514 CD109Q6YHK3 1445 aa18.52■□□□□ 0.56
PRPF3-203ENST00000467514 KCNH8Q96L42 1107 aa18.52■□□□□ 0.56
PRPF3-203ENST00000467514 RAPGEF2Q9Y4G8 1499 aa18.51■□□□□ 0.55
PRPF3-203ENST00000467514 FBXO41Q8TF61 875 aa18.49■□□□□ 0.55
PRPF3-203ENST00000467514 CTTNBP2Q8WZ74 1663 aa18.47■□□□□ 0.55
PRPF3-203ENST00000467514 MAGI3Q5TCQ9 1506 aa18.46■□□□□ 0.55
PRPF3-203ENST00000467514 GOLGA3Q08378 1498 aa18.43■□□□□ 0.54
PRPF3-203ENST00000467514 FAM9AQ8IZU1 332 aaPredicted RBP18.42■□□□□ 0.54
PRPF3-203ENST00000467514 ARID3CA6NKF2 412 aa18.38■□□□□ 0.53
PRPF3-203ENST00000467514 ABCA8O94911 1581 aa18.37■□□□□ 0.53
PRPF3-203ENST00000467514 ARID4BQ4LE39 1312 aaPredicted RBP18.35■□□□□ 0.53
PRPF3-203ENST00000467514 PTPRMP28827 1452 aa18.34■□□□□ 0.53
PRPF3-203ENST00000467514 ARAP3Q8WWN8 1544 aa18.33■□□□□ 0.52
PRPF3-203ENST00000467514 ADAMTSL3P82987 1691 aa18.31■□□□□ 0.52
PRPF3-203ENST00000467514 PCF11O94913 1555 aaKnown RBP18.28■□□□□ 0.52
PRPF3-203ENST00000467514 MADDQ8WXG6 1647 aa18.27■□□□□ 0.52
PRPF3-203ENST00000467514 BCORL1Q5H9F3 1711 aa18.27■□□□□ 0.52
PRPF3-203ENST00000467514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.27■□□□□ 0.52
PRPF3-203ENST00000467514 HNRNPUL2Q1KMD3 747 aaKnown RBP18.27■□□□□ 0.52
PRPF3-203ENST00000467514 RAPGEF3O95398 923 aa18.26■□□□□ 0.51
PRPF3-203ENST00000467514 PLPPR3Q6T4P5 718 aa18.26■□□□□ 0.51
PRPF3-203ENST00000467514 PHLDB1Q86UU1 1377 aa18.26■□□□□ 0.51
PRPF3-203ENST00000467514 ABCA9Q8IUA7 1624 aa18.25■□□□□ 0.51
PRPF3-203ENST00000467514 P3H3Q8IVL6 736 aa18.25■□□□□ 0.51
PRPF3-203ENST00000467514 RIMS1Q86UR5 1692 aaKnown RBP18.24■□□□□ 0.51
PRPF3-203ENST00000467514 ATP10BO94823 1461 aa18.21■□□□□ 0.51
PRPF3-203ENST00000467514 NEO1Q92859 1461 aa18.21■□□□□ 0.51
PRPF3-203ENST00000467514 LMTK3Q96Q04 1460 aa18.2■□□□□ 0.5
PRPF3-203ENST00000467514 ARHGEF40Q8TER5 1519 aa18.17■□□□□ 0.5
PRPF3-203ENST00000467514 FRMPD1Q5SYB0 1578 aa18.17■□□□□ 0.5
PRPF3-203ENST00000467514 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
PRPF3-203ENST00000467514 HSPA2P54652 639 aa18.15■□□□□ 0.5
PRPF3-203ENST00000467514 POGZQ7Z3K3 1410 aa18.14■□□□□ 0.49
PRPF3-203ENST00000467514 FANCAO15360 1455 aa18.12■□□□□ 0.49
PRPF3-203ENST00000467514 DENND4BO75064 1496 aaPredicted RBP18.12■□□□□ 0.49
PRPF3-203ENST00000467514 PRXQ9BXM0 1461 aa18.12■□□□□ 0.49
PRPF3-203ENST00000467514 CFAP74Q9C0B2 1584 aa18.12■□□□□ 0.49
PRPF3-203ENST00000467514 RANGAP1P46060 587 aaPredicted RBP18.09■□□□□ 0.49
PRPF3-203ENST00000467514 RICTORQ6R327 1708 aa18.09■□□□□ 0.49
PRPF3-203ENST00000467514 AKNAQ7Z591 1439 aa18.08■□□□□ 0.49
PRPF3-203ENST00000467514 MLECQ14165 292 aa18.08■□□□□ 0.48
PRPF3-203ENST00000467514 CERKQ8TCT0 537 aa18.08■□□□□ 0.48
PRPF3-203ENST00000467514 FER1L4A9Z1Z3 1794 aa18.07■□□□□ 0.48
PRPF3-203ENST00000467514 SAMD9Q5K651 1589 aa18.07■□□□□ 0.48
PRPF3-203ENST00000467514 EFCAB5A4FU69 1503 aa18.05■□□□□ 0.48
PRPF3-203ENST00000467514 ZFYVE16Q7Z3T8 1539 aa18.05■□□□□ 0.48
PRPF3-203ENST00000467514 DISP3Q9P2K9 1392 aa18.04■□□□□ 0.48
PRPF3-203ENST00000467514 PLEKHD1A6NEE1 506 aa18.04■□□□□ 0.48
PRPF3-203ENST00000467514 NUP153P49790 1475 aaKnown RBP18.02■□□□□ 0.48
PRPF3-203ENST00000467514 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
PRPF3-203ENST00000467514 ZMYM4Q5VZL5 1548 aa17.99■□□□□ 0.47
PRPF3-203ENST00000467514 TTC37Q6PGP7 1564 aa17.98■□□□□ 0.47
PRPF3-203ENST00000467514 PREX1Q8TCU6 1659 aa17.98■□□□□ 0.47
PRPF3-203ENST00000467514 YEATS2Q9ULM3 1422 aa17.98■□□□□ 0.47
PRPF3-203ENST00000467514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
PRPF3-203ENST00000467514 SIGLEC1Q9BZZ2 1709 aa17.96■□□□□ 0.47
PRPF3-203ENST00000467514 MAGI2Q86UL8 1455 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms