RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 FBXO41Q8TF61 875 aa12.16□□□□□ -0.46
PTPRE-206ENST00000467366 ADAMTS12P58397 1594 aa12.16□□□□□ -0.46
PTPRE-206ENST00000467366 PRG4Q92954 1404 aaPredicted RBP12.14□□□□□ -0.47
PTPRE-206ENST00000467366 ABCA10Q8WWZ4 1543 aa12.14□□□□□ -0.47
PTPRE-206ENST00000467366 ADCY10Q96PN6 1610 aa12.13□□□□□ -0.47
PTPRE-206ENST00000467366 NPM1P06748 294 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTPRE-206ENST00000467366 PPRC1Q5VV67 1664 aaKnown RBP12.07□□□□□ -0.48
PTPRE-206ENST00000467366 JPH4Q96JJ6 628 aa12.06□□□□□ -0.48
PTPRE-206ENST00000467366 FHAD1B1AJZ9 1412 aa12.05□□□□□ -0.48
PTPRE-206ENST00000467366 LMTK3Q96Q04 1460 aa12.05□□□□□ -0.48
PTPRE-206ENST00000467366 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
PTPRE-206ENST00000467366 RUSC2Q8N2Y8 1516 aa12.01□□□□□ -0.49
PTPRE-206ENST00000467366 ERICH3Q5RHP9 1530 aa11.97□□□□□ -0.49
PTPRE-206ENST00000467366 GLI2P10070 1586 aa11.96□□□□□ -0.5
PTPRE-206ENST00000467366 ILDR2Q71H61 639 aa11.95□□□□□ -0.5
PTPRE-206ENST00000467366 TOP2BQ02880 1626 aa11.95□□□□□ -0.5
PTPRE-206ENST00000467366 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
PTPRE-206ENST00000467366 SOCS7O14512 581 aa11.94□□□□□ -0.5
PTPRE-206ENST00000467366 ASXL2Q76L83 1435 aa11.91□□□□□ -0.5
PTPRE-206ENST00000467366 CUL7Q14999 1698 aa11.91□□□□□ -0.5
PTPRE-206ENST00000467366 MAP3K4Q9Y6R4 1608 aa11.9□□□□□ -0.5
PTPRE-206ENST00000467366 BIVM-ERCC5R4GMW8 1640 aa11.89□□□□□ -0.51
PTPRE-206ENST00000467366 PLB1Q6P1J6 1458 aa11.89□□□□□ -0.51
PTPRE-206ENST00000467366 ABCC2Q92887 1545 aa11.88□□□□□ -0.51
PTPRE-206ENST00000467366 TEX14Q8IWB6 1497 aa11.85□□□□□ -0.51
PTPRE-206ENST00000467366 DISP3Q9P2K9 1392 aa11.85□□□□□ -0.51
PTPRE-206ENST00000467366 KIF21BO75037 1637 aa11.85□□□□□ -0.51
PTPRE-206ENST00000467366 EPRSP07814 1512 aaKnown RBP11.85□□□□□ -0.51
PTPRE-206ENST00000467366 PTPRGP23470 1445 aa11.85□□□□□ -0.51
PTPRE-206ENST00000467366 KIAA0586Q9BVV6 1533 aa11.84□□□□□ -0.51
PTPRE-206ENST00000467366 TTBK1Q5TCY1 1321 aaPredicted RBP11.84□□□□□ -0.51
PTPRE-206ENST00000467366 PTPRMP28827 1452 aa11.79□□□□□ -0.52
PTPRE-206ENST00000467366 UHRF1BP1LA0JNW5 1464 aa11.78□□□□□ -0.52
PTPRE-206ENST00000467366 PCF11O94913 1555 aaKnown RBP11.78□□□□□ -0.52
PTPRE-206ENST00000467366 ADAMTSL3P82987 1691 aa11.77□□□□□ -0.53
PTPRE-206ENST00000467366 TNIKQ9UKE5 1360 aa11.77□□□□□ -0.53
PTPRE-206ENST00000467366 ZCCHC11Q5TAX3 1644 aaKnown RBP11.76□□□□□ -0.53
PTPRE-206ENST00000467366 KDM5BQ9UGL1 1544 aa11.75□□□□□ -0.53
PTPRE-206ENST00000467366 CERKQ8TCT0 537 aa11.74□□□□□ -0.53
PTPRE-206ENST00000467366 UACAQ9BZF9 1416 aa11.74□□□□□ -0.53
PTPRE-206ENST00000467366 SPATA31D1Q6ZQQ2 1576 aa11.74□□□□□ -0.53
PTPRE-206ENST00000467366 CARMIL2Q6F5E8 1435 aa11.72□□□□□ -0.53
PTPRE-206ENST00000467366 CFAP43Q8NDM7 1665 aa11.71□□□□□ -0.54
PTPRE-206ENST00000467366 MADDQ8WXG6 1647 aa11.7□□□□□ -0.54
PTPRE-206ENST00000467366 MAGI3Q5TCQ9 1506 aa11.7□□□□□ -0.54
PTPRE-206ENST00000467366 HSPA2P54652 639 aa11.68□□□□□ -0.54
PTPRE-206ENST00000467366 BCORL1Q5H9F3 1711 aa11.68□□□□□ -0.54
PTPRE-206ENST00000467366 WDR7Q9Y4E6 1490 aa11.68□□□□□ -0.54
PTPRE-206ENST00000467366 CD109Q6YHK3 1445 aa11.68□□□□□ -0.54
PTPRE-206ENST00000467366 IQGAP2Q13576 1575 aa11.67□□□□□ -0.54
PTPRE-206ENST00000467366 IGF1RP08069 1367 aa11.67□□□□□ -0.54
PTPRE-206ENST00000467366 DISP1Q96F81 1524 aa11.66□□□□□ -0.54
PTPRE-206ENST00000467366 RIMS1Q86UR5 1692 aaKnown RBP11.65□□□□□ -0.55
PTPRE-206ENST00000467366 ARAP3Q8WWN8 1544 aa11.63□□□□□ -0.55
PTPRE-206ENST00000467366 KCNH8Q96L42 1107 aa11.6□□□□□ -0.55
PTPRE-206ENST00000467366 KIAA0556O60303 1618 aa11.58□□□□□ -0.56
PTPRE-206ENST00000467366 CARMIL1Q5VZK9 1371 aa11.56□□□□□ -0.56
PTPRE-206ENST00000467366 KIF27Q86VH2 1401 aa11.56□□□□□ -0.56
PTPRE-206ENST00000467366 ARID4BQ4LE39 1312 aaPredicted RBP11.56□□□□□ -0.56
PTPRE-206ENST00000467366 UGGT2Q9NYU1 1516 aa11.55□□□□□ -0.56
PTPRE-206ENST00000467366 PLPPR3Q6T4P5 718 aa11.55□□□□□ -0.56
PTPRE-206ENST00000467366 FRMPD1Q5SYB0 1578 aa11.54□□□□□ -0.56
PTPRE-206ENST00000467366 RAPGEF3O95398 923 aa11.54□□□□□ -0.56
PTPRE-206ENST00000467366 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
PTPRE-206ENST00000467366 ABCA8O94911 1581 aa11.51□□□□□ -0.57
PTPRE-206ENST00000467366 SIGLEC1Q9BZZ2 1709 aa11.51□□□□□ -0.57
PTPRE-206ENST00000467366 ABCA9Q8IUA7 1624 aa11.49□□□□□ -0.57
PTPRE-206ENST00000467366 ARHGEF40Q8TER5 1519 aa11.49□□□□□ -0.57
PTPRE-206ENST00000467366 PHLDB1Q86UU1 1377 aa11.48□□□□□ -0.57
PTPRE-206ENST00000467366 PREX1Q8TCU6 1659 aa11.48□□□□□ -0.57
PTPRE-206ENST00000467366 FER1L4A9Z1Z3 1794 aa11.46□□□□□ -0.57
PTPRE-206ENST00000467366 NEO1Q92859 1461 aa11.46□□□□□ -0.57
PTPRE-206ENST00000467366 YEATS2Q9ULM3 1422 aa11.46□□□□□ -0.57
PTPRE-206ENST00000467366 TTC37Q6PGP7 1564 aa11.45□□□□□ -0.58
PTPRE-206ENST00000467366 RICTORQ6R327 1708 aa11.45□□□□□ -0.58
PTPRE-206ENST00000467366 LTBP4Q8N2S1 1624 aa11.44□□□□□ -0.58
PTPRE-206ENST00000467366 SUPT5HO00267 1087 aaKnown RBP11.43□□□□□ -0.58
PTPRE-206ENST00000467366 DMRT2Q9Y5R5 561 aa11.43□□□□□ -0.58
PTPRE-206ENST00000467366 FANCAO15360 1455 aa11.43□□□□□ -0.58
PTPRE-206ENST00000467366 POGZQ7Z3K3 1410 aa11.42□□□□□ -0.58
PTPRE-206ENST00000467366 CTTNBP2Q8WZ74 1663 aa11.4□□□□□ -0.58
PTPRE-206ENST00000467366 ATP10BO94823 1461 aa11.4□□□□□ -0.58
PTPRE-206ENST00000467366 IQSEC2Q5JU85 1478 aa11.4□□□□□ -0.58
PTPRE-206ENST00000467366 ARID3CA6NKF2 412 aa11.4□□□□□ -0.58
PTPRE-206ENST00000467366 RAPGEF2Q9Y4G8 1499 aa11.39□□□□□ -0.59
PTPRE-206ENST00000467366 MLECQ14165 292 aa11.39□□□□□ -0.59
PTPRE-206ENST00000467366 PTPRTO14522 1441 aa11.38□□□□□ -0.59
PTPRE-206ENST00000467366 AKNAQ7Z591 1439 aa11.38□□□□□ -0.59
PTPRE-206ENST00000467366 CEBPAP49715 358 aaPredicted RBP11.37□□□□□ -0.59
PTPRE-206ENST00000467366 DENND4BO75064 1496 aaPredicted RBP11.37□□□□□ -0.59
PTPRE-206ENST00000467366 FHOD3Q2V2M9 1422 aa11.36□□□□□ -0.59
PTPRE-206ENST00000467366 ZMYM4Q5VZL5 1548 aa11.36□□□□□ -0.59
PTPRE-206ENST00000467366 ZFYVE16Q7Z3T8 1539 aa11.36□□□□□ -0.59
PTPRE-206ENST00000467366 GOLGA3Q08378 1498 aa11.36□□□□□ -0.59
PTPRE-206ENST00000467366 ARHGEF12Q9NZN5 1544 aa11.35□□□□□ -0.59
PTPRE-206ENST00000467366 MED1Q15648 1581 aaPredicted RBP11.35□□□□□ -0.59
PTPRE-206ENST00000467366 EFCAB5A4FU69 1503 aa11.35□□□□□ -0.59
PTPRE-206ENST00000467366 UHRF1BP1Q6BDS2 1440 aa11.34□□□□□ -0.59
PTPRE-206ENST00000467366 HECW1Q76N89 1606 aa11.32□□□□□ -0.6
PTPRE-206ENST00000467366 CFAP74Q9C0B2 1584 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms