RNA–Protein interactions for RNA: ENST00000467004.5

CCZ1B-206, Transcript of CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated, humanhuman

TSL 2

Gene CCZ1B, Length 2,867 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCZ1B-206ENST00000467004 MAGI1Q96QZ7 1491 aaPredicted RBP18.45■□□□□ 0.54
CCZ1B-206ENST00000467004 PCGF6Q9BYE7 350 aa18.44■□□□□ 0.54
CCZ1B-206ENST00000467004 SAMD9Q5K651 1589 aa18.43■□□□□ 0.54
CCZ1B-206ENST00000467004 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
CCZ1B-206ENST00000467004 IQGAP2Q13576 1575 aa18.36■□□□□ 0.53
CCZ1B-206ENST00000467004 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
CCZ1B-206ENST00000467004 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
CCZ1B-206ENST00000467004 MAP3K1Q13233 1512 aa18.35■□□□□ 0.53
CCZ1B-206ENST00000467004 RANGAP1P46060 587 aaPredicted RBP18.34■□□□□ 0.53
CCZ1B-206ENST00000467004 UGGT2Q9NYU1 1516 aa18.31■□□□□ 0.52
CCZ1B-206ENST00000467004 KIAA0586Q9BVV6 1533 aa18.29■□□□□ 0.52
CCZ1B-206ENST00000467004 PCF11O94913 1555 aaKnown RBP18.29■□□□□ 0.52
CCZ1B-206ENST00000467004 CFAP43Q8NDM7 1665 aa18.29■□□□□ 0.52
CCZ1B-206ENST00000467004 FYCO1Q9BQS8 1478 aa18.28■□□□□ 0.52
CCZ1B-206ENST00000467004 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.52
CCZ1B-206ENST00000467004 FMN1Q68DA7 1419 aa18.26■□□□□ 0.51
CCZ1B-206ENST00000467004 TIAM1Q13009 1591 aa18.26■□□□□ 0.51
CCZ1B-206ENST00000467004 APLP2Q06481 763 aa18.26■□□□□ 0.51
CCZ1B-206ENST00000467004 PPARGC1BQ86YN6 1023 aaKnown RBP18.25■□□□□ 0.51
CCZ1B-206ENST00000467004 CEP170Q5SW79 1584 aa18.25■□□□□ 0.51
CCZ1B-206ENST00000467004 NUP160Q12769 1436 aa18.25■□□□□ 0.51
CCZ1B-206ENST00000467004 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
CCZ1B-206ENST00000467004 KIAA0556O60303 1618 aa18.19■□□□□ 0.5
CCZ1B-206ENST00000467004 CHMP7Q8WUX9 453 aaPredicted RBP18.16■□□□□ 0.5
CCZ1B-206ENST00000467004 DISP1Q96F81 1524 aa18.16■□□□□ 0.5
CCZ1B-206ENST00000467004 CHD1O14646 1710 aa18.16■□□□□ 0.5
CCZ1B-206ENST00000467004 LRRIQ1Q96JM4 1722 aa18.14■□□□□ 0.49
CCZ1B-206ENST00000467004 LRRC9Q6ZRR7 1453 aa18.14■□□□□ 0.49
CCZ1B-206ENST00000467004 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
CCZ1B-206ENST00000467004 HECW1Q76N89 1606 aa18.12■□□□□ 0.49
CCZ1B-206ENST00000467004 KANK4Q5T7N3 995 aaPredicted RBP18.11■□□□□ 0.49
CCZ1B-206ENST00000467004 RRBP1Q9P2E9 1410 aaKnown RBP18.08■□□□□ 0.49
CCZ1B-206ENST00000467004 CCDC18Q5T9S5 1454 aa18.08■□□□□ 0.48
CCZ1B-206ENST00000467004 TTBK1Q5TCY1 1321 aaPredicted RBP18.07■□□□□ 0.48
CCZ1B-206ENST00000467004 HRCP23327 699 aa18.07■□□□□ 0.48
CCZ1B-206ENST00000467004 SHROOM2Q13796 1616 aa18.05■□□□□ 0.48
CCZ1B-206ENST00000467004 CARMIL2Q6F5E8 1435 aa18.02■□□□□ 0.48
CCZ1B-206ENST00000467004 RAPGEF6Q8TEU7 1601 aa18.02■□□□□ 0.47
CCZ1B-206ENST00000467004 EHBP1L1Q8N3D4 1523 aa18.02■□□□□ 0.47
CCZ1B-206ENST00000467004 FBLN2P98095 1184 aa18.01■□□□□ 0.47
CCZ1B-206ENST00000467004 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
CCZ1B-206ENST00000467004 JPH4Q96JJ6 628 aa17.98■□□□□ 0.47
CCZ1B-206ENST00000467004 CLASP1Q7Z460 1538 aa17.97■□□□□ 0.47
CCZ1B-206ENST00000467004 SUPT6HQ7KZ85 1726 aaKnown RBP17.97■□□□□ 0.47
CCZ1B-206ENST00000467004 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
CCZ1B-206ENST00000467004 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
CCZ1B-206ENST00000467004 NUP153P49790 1475 aaKnown RBP17.94■□□□□ 0.46
CCZ1B-206ENST00000467004 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
CCZ1B-206ENST00000467004 PHLDB1Q86UU1 1377 aa17.93■□□□□ 0.46
CCZ1B-206ENST00000467004 ABCA8O94911 1581 aa17.93■□□□□ 0.46
CCZ1B-206ENST00000467004 MTUS2Q5JR59 1369 aa17.91■□□□□ 0.46
CCZ1B-206ENST00000467004 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
CCZ1B-206ENST00000467004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.9■□□□□ 0.46
CCZ1B-206ENST00000467004 CDK13Q14004 1512 aaKnown RBP17.9■□□□□ 0.46
CCZ1B-206ENST00000467004 PRG4Q92954 1404 aaPredicted RBP17.9■□□□□ 0.46
CCZ1B-206ENST00000467004 NCOA2Q15596 1464 aa17.88■□□□□ 0.45
CCZ1B-206ENST00000467004 PLB1Q6P1J6 1458 aa17.86■□□□□ 0.45
CCZ1B-206ENST00000467004 ZEB1P37275 1124 aaPredicted RBP17.86■□□□□ 0.45
CCZ1B-206ENST00000467004 ADCY10Q96PN6 1610 aa17.84■□□□□ 0.45
CCZ1B-206ENST00000467004 FGD6Q6ZV73 1430 aa17.84■□□□□ 0.45
CCZ1B-206ENST00000467004 MYOM3Q5VTT5 1437 aa17.83■□□□□ 0.45
CCZ1B-206ENST00000467004 HNRNPUL2Q1KMD3 747 aaKnown RBP17.79■□□□□ 0.44
CCZ1B-206ENST00000467004 PTPRGP23470 1445 aa17.79■□□□□ 0.44
CCZ1B-206ENST00000467004 TCOF1Q13428 1488 aaKnown RBP17.78■□□□□ 0.44
CCZ1B-206ENST00000467004 ERCC6L2Q5T890 1561 aa17.78■□□□□ 0.44
CCZ1B-206ENST00000467004 TROQ12816 1431 aaPredicted RBP17.77■□□□□ 0.44
CCZ1B-206ENST00000467004 PTPN23Q9H3S7 1636 aa17.77■□□□□ 0.43
CCZ1B-206ENST00000467004 MIA2Q96PC5 1412 aa17.76■□□□□ 0.43
CCZ1B-206ENST00000467004 CDK11AQ9UQ88 783 aaPredicted RBP17.75■□□□□ 0.43
CCZ1B-206ENST00000467004 ATP10BO94823 1461 aa17.74■□□□□ 0.43
CCZ1B-206ENST00000467004 ABCC2Q92887 1545 aa17.73■□□□□ 0.43
CCZ1B-206ENST00000467004 UACAQ9BZF9 1416 aa17.73■□□□□ 0.43
CCZ1B-206ENST00000467004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.73■□□□□ 0.43
CCZ1B-206ENST00000467004 ITSN2Q9NZM3 1697 aa17.73■□□□□ 0.43
CCZ1B-206ENST00000467004 UHRF1BP1LA0JNW5 1464 aa17.71■□□□□ 0.43
CCZ1B-206ENST00000467004 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
CCZ1B-206ENST00000467004 KIF14Q15058 1648 aa17.69■□□□□ 0.42
CCZ1B-206ENST00000467004 FAM50AQ14320 339 aaKnown RBP17.66■□□□□ 0.42
CCZ1B-206ENST00000467004 ABCC10Q5T3U5 1492 aa17.65■□□□□ 0.42
CCZ1B-206ENST00000467004 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.41
CCZ1B-206ENST00000467004 ARID3CA6NKF2 412 aa17.63■□□□□ 0.41
CCZ1B-206ENST00000467004 CDC42BPAQ5VT25 1732 aa17.63■□□□□ 0.41
CCZ1B-206ENST00000467004 CLSPNQ9HAW4 1339 aa17.62■□□□□ 0.41
CCZ1B-206ENST00000467004 AKNAQ7Z591 1439 aa17.62■□□□□ 0.41
CCZ1B-206ENST00000467004 KDM5BQ9UGL1 1544 aa17.62■□□□□ 0.41
CCZ1B-206ENST00000467004 GPATCH8Q9UKJ3 1502 aaKnown RBP17.62■□□□□ 0.41
CCZ1B-206ENST00000467004 DNMT1P26358 1616 aaKnown RBP17.61■□□□□ 0.41
CCZ1B-206ENST00000467004 ZCCHC11Q5TAX3 1644 aaKnown RBP17.61■□□□□ 0.41
CCZ1B-206ENST00000467004 PTPRKQ15262 1439 aa17.6■□□□□ 0.41
CCZ1B-206ENST00000467004 GCC2Q8IWJ2 1684 aa17.6■□□□□ 0.41
CCZ1B-206ENST00000467004 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
CCZ1B-206ENST00000467004 HFM1A2PYH4 1435 aa17.6■□□□□ 0.41
CCZ1B-206ENST00000467004 PLEKHD1A6NEE1 506 aa17.6■□□□□ 0.41
CCZ1B-206ENST00000467004 RAB3GAP2Q9H2M9 1393 aa17.6■□□□□ 0.41
CCZ1B-206ENST00000467004 OSCARQ8IYS5 282 aa17.58■□□□□ 0.4
CCZ1B-206ENST00000467004 ITGAEP38570 1179 aa17.57■□□□□ 0.4
CCZ1B-206ENST00000467004 PREX2Q70Z35 1606 aa17.56■□□□□ 0.4
CCZ1B-206ENST00000467004 CROCC2H7BZ55 1655 aa17.56■□□□□ 0.4
CCZ1B-206ENST00000467004 CAMSAP2Q08AD1 1489 aa17.55■□□□□ 0.4
CCZ1B-206ENST00000467004 DAPK1P53355 1430 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms