RNA–Protein interactions for RNA: ENST00000466698.1

SEMA4A-210, Transcript of semaphorin 4A, humanhuman

TSL 3

Gene SEMA4A, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4A-210ENST00000466698 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.33
SEMA4A-210ENST00000466698 NPM1P06748 294 aaKnown RBP eCLIP23.3■■□□□ 1.32
SEMA4A-210ENST00000466698 ABCC10Q5T3U5 1492 aa23.29■■□□□ 1.32
SEMA4A-210ENST00000466698 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
SEMA4A-210ENST00000466698 FAM69CQ0P6D2 419 aa23.26■■□□□ 1.31
SEMA4A-210ENST00000466698 CHIC1Q5VXU3 224 aa23.23■■□□□ 1.31
SEMA4A-210ENST00000466698 DIP2BQ9P265 1576 aa23.21■■□□□ 1.31
SEMA4A-210ENST00000466698 ADCY10Q96PN6 1610 aa23.21■■□□□ 1.31
SEMA4A-210ENST00000466698 KIAA0586Q9BVV6 1533 aa23.2■■□□□ 1.3
SEMA4A-210ENST00000466698 CUL7Q14999 1698 aa23.16■■□□□ 1.3
SEMA4A-210ENST00000466698 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
SEMA4A-210ENST00000466698 IGF1RP08069 1367 aa23.13■■□□□ 1.29
SEMA4A-210ENST00000466698 KDM6BO15054 1643 aa23.11■■□□□ 1.29
SEMA4A-210ENST00000466698 TSPOAP1O95153 1857 aa23.05■■□□□ 1.28
SEMA4A-210ENST00000466698 PTPRGP23470 1445 aa23.04■■□□□ 1.28
SEMA4A-210ENST00000466698 CARMIL2Q6F5E8 1435 aa23■■□□□ 1.27
SEMA4A-210ENST00000466698 CARMIL1Q5VZK9 1371 aa22.99■■□□□ 1.27
SEMA4A-210ENST00000466698 TNIKQ9UKE5 1360 aa22.98■■□□□ 1.27
SEMA4A-210ENST00000466698 ABCC2Q92887 1545 aa22.98■■□□□ 1.27
SEMA4A-210ENST00000466698 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
SEMA4A-210ENST00000466698 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
SEMA4A-210ENST00000466698 PLB1Q6P1J6 1458 aa22.93■■□□□ 1.26
SEMA4A-210ENST00000466698 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
SEMA4A-210ENST00000466698 ASXL2Q76L83 1435 aa22.91■■□□□ 1.26
SEMA4A-210ENST00000466698 GLI2P10070 1586 aa22.9■■□□□ 1.26
SEMA4A-210ENST00000466698 UHRF1BP1LA0JNW5 1464 aa22.9■■□□□ 1.26
SEMA4A-210ENST00000466698 UACAQ9BZF9 1416 aa22.85■■□□□ 1.25
SEMA4A-210ENST00000466698 PPRC1Q5VV67 1664 aaKnown RBP22.84■■□□□ 1.25
SEMA4A-210ENST00000466698 EEA1Q15075 1411 aa22.83■■□□□ 1.25
SEMA4A-210ENST00000466698 DISP1Q96F81 1524 aa22.82■■□□□ 1.24
SEMA4A-210ENST00000466698 FAM9AQ8IZU1 332 aaPredicted RBP22.79■■□□□ 1.24
SEMA4A-210ENST00000466698 KDM5BQ9UGL1 1544 aa22.78■■□□□ 1.24
SEMA4A-210ENST00000466698 CSRNP3Q8WYN3 585 aa22.77■■□□□ 1.24
SEMA4A-210ENST00000466698 TEX14Q8IWB6 1497 aa22.77■■□□□ 1.24
SEMA4A-210ENST00000466698 EPRSP07814 1512 aaKnown RBP22.77■■□□□ 1.24
SEMA4A-210ENST00000466698 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
SEMA4A-210ENST00000466698 MAP3K4Q9Y6R4 1608 aa22.75■■□□□ 1.23
SEMA4A-210ENST00000466698 RAPGEF2Q9Y4G8 1499 aa22.75■■□□□ 1.23
SEMA4A-210ENST00000466698 ADGRL1O94910 1474 aa22.74■■□□□ 1.23
SEMA4A-210ENST00000466698 ZCCHC11Q5TAX3 1644 aaKnown RBP22.72■■□□□ 1.23
SEMA4A-210ENST00000466698 KIAA0556O60303 1618 aa22.71■■□□□ 1.23
SEMA4A-210ENST00000466698 PRXQ9BXM0 1461 aa22.68■■□□□ 1.22
SEMA4A-210ENST00000466698 COL17A1Q9UMD9 1497 aaPredicted RBP22.68■■□□□ 1.22
SEMA4A-210ENST00000466698 WDR7Q9Y4E6 1490 aa22.65■■□□□ 1.22
SEMA4A-210ENST00000466698 ILDR1Q86SU0 546 aaPredicted RBP22.6■■□□□ 1.21
SEMA4A-210ENST00000466698 CTTNBP2Q8WZ74 1663 aa22.59■■□□□ 1.21
SEMA4A-210ENST00000466698 GOLGA3Q08378 1498 aa22.59■■□□□ 1.21
SEMA4A-210ENST00000466698 KIF21BO75037 1637 aa22.57■■□□□ 1.2
SEMA4A-210ENST00000466698 CFAP43Q8NDM7 1665 aa22.55■■□□□ 1.2
SEMA4A-210ENST00000466698 MAGI3Q5TCQ9 1506 aa22.55■■□□□ 1.2
SEMA4A-210ENST00000466698 CD109Q6YHK3 1445 aa22.54■■□□□ 1.2
SEMA4A-210ENST00000466698 HECW2Q9P2P5 1572 aa22.54■■□□□ 1.2
SEMA4A-210ENST00000466698 ABCA8O94911 1581 aa22.52■■□□□ 1.2
SEMA4A-210ENST00000466698 KCNH8Q96L42 1107 aa22.47■■□□□ 1.19
SEMA4A-210ENST00000466698 EHMT2Q96KQ7 1210 aa22.46■■□□□ 1.19
SEMA4A-210ENST00000466698 UBTFP17480 764 aaKnown RBP22.4■■□□□ 1.18
SEMA4A-210ENST00000466698 ARAP3Q8WWN8 1544 aa22.39■■□□□ 1.17
SEMA4A-210ENST00000466698 PHLDB1Q86UU1 1377 aa22.35■■□□□ 1.17
SEMA4A-210ENST00000466698 ATP10BO94823 1461 aa22.32■■□□□ 1.16
SEMA4A-210ENST00000466698 ABCA9Q8IUA7 1624 aa22.31■■□□□ 1.16
SEMA4A-210ENST00000466698 LOC105371045A0A1W2PR82 267 aa22.3■■□□□ 1.16
SEMA4A-210ENST00000466698 ARID3CA6NKF2 412 aa22.27■■□□□ 1.16
SEMA4A-210ENST00000466698 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
SEMA4A-210ENST00000466698 NEO1Q92859 1461 aa22.25■■□□□ 1.15
SEMA4A-210ENST00000466698 SAMD9Q5K651 1589 aa22.24■■□□□ 1.15
SEMA4A-210ENST00000466698 RANGAP1P46060 587 aaPredicted RBP22.23■■□□□ 1.15
SEMA4A-210ENST00000466698 RAPGEF6Q8TEU7 1601 aa22.23■■□□□ 1.15
SEMA4A-210ENST00000466698 ADAMTSL3P82987 1691 aa22.22■■□□□ 1.15
SEMA4A-210ENST00000466698 PTPRMP28827 1452 aa22.21■■□□□ 1.15
SEMA4A-210ENST00000466698 RAPGEF3O95398 923 aa22.19■■□□□ 1.14
SEMA4A-210ENST00000466698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
SEMA4A-210ENST00000466698 HNRNPUL2Q1KMD3 747 aaKnown RBP22.17■■□□□ 1.14
SEMA4A-210ENST00000466698 FBXO41Q8TF61 875 aa22.15■■□□□ 1.14
SEMA4A-210ENST00000466698 BCORL1Q5H9F3 1711 aa22.14■■□□□ 1.14
SEMA4A-210ENST00000466698 EFCAB5A4FU69 1503 aa22.14■■□□□ 1.13
SEMA4A-210ENST00000466698 FRMPD1Q5SYB0 1578 aa22.13■■□□□ 1.13
SEMA4A-210ENST00000466698 NUP153P49790 1475 aaKnown RBP22.13■■□□□ 1.13
SEMA4A-210ENST00000466698 ARID4BQ4LE39 1312 aaPredicted RBP22.12■■□□□ 1.13
SEMA4A-210ENST00000466698 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
SEMA4A-210ENST00000466698 PCF11O94913 1555 aaKnown RBP22.09■■□□□ 1.13
SEMA4A-210ENST00000466698 ARHGEF40Q8TER5 1519 aa22.09■■□□□ 1.13
SEMA4A-210ENST00000466698 ARHGAP35Q9NRY4 1499 aa22.09■■□□□ 1.13
SEMA4A-210ENST00000466698 CFAP74Q9C0B2 1584 aa22.08■■□□□ 1.12
SEMA4A-210ENST00000466698 CLIP1P30622 1438 aa22.07■■□□□ 1.12
SEMA4A-210ENST00000466698 PLEKHD1A6NEE1 506 aa22.07■■□□□ 1.12
SEMA4A-210ENST00000466698 DENND4BO75064 1496 aaPredicted RBP22.07■■□□□ 1.12
SEMA4A-210ENST00000466698 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
SEMA4A-210ENST00000466698 FHOD3Q2V2M9 1422 aa22.06■■□□□ 1.12
SEMA4A-210ENST00000466698 RICTORQ6R327 1708 aa22.05■■□□□ 1.12
SEMA4A-210ENST00000466698 LMTK3Q96Q04 1460 aa22.03■■□□□ 1.12
SEMA4A-210ENST00000466698 AKNAQ7Z591 1439 aa22.03■■□□□ 1.12
SEMA4A-210ENST00000466698 FANCAO15360 1455 aa22.03■■□□□ 1.12
SEMA4A-210ENST00000466698 POGZQ7Z3K3 1410 aa22.01■■□□□ 1.11
SEMA4A-210ENST00000466698 RIMS1Q86UR5 1692 aaKnown RBP22.01■■□□□ 1.11
SEMA4A-210ENST00000466698 ZMYM4Q5VZL5 1548 aa21.99■■□□□ 1.11
SEMA4A-210ENST00000466698 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.99■■□□□ 1.11
SEMA4A-210ENST00000466698 MAGI2Q86UL8 1455 aa21.96■■□□□ 1.11
SEMA4A-210ENST00000466698 ZFYVE16Q7Z3T8 1539 aa21.96■■□□□ 1.11
SEMA4A-210ENST00000466698 TTC37Q6PGP7 1564 aa21.95■■□□□ 1.1
SEMA4A-210ENST00000466698 FMN1Q68DA7 1419 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms