RNA–Protein interactions for RNA: ENST00000466217.5

ATG9A-219, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-219ENST00000466217 KIF13AQ9H1H9 1805 aa24.51■■□□□ 1.51
ATG9A-219ENST00000466217 ABCC10Q5T3U5 1492 aa24.42■■□□□ 1.5
ATG9A-219ENST00000466217 MAPKBP1O60336 1514 aa24.41■■□□□ 1.5
ATG9A-219ENST00000466217 NPM1P06748 294 aaKnown RBP eCLIP24.39■■□□□ 1.49
ATG9A-219ENST00000466217 KIAA0586Q9BVV6 1533 aa24.39■■□□□ 1.49
ATG9A-219ENST00000466217 FAM69CQ0P6D2 419 aa24.36■■□□□ 1.49
ATG9A-219ENST00000466217 IGF1RP08069 1367 aa24.36■■□□□ 1.49
ATG9A-219ENST00000466217 ADCY10Q96PN6 1610 aa24.35■■□□□ 1.49
ATG9A-219ENST00000466217 KIF27Q86VH2 1401 aa24.35■■□□□ 1.49
ATG9A-219ENST00000466217 CUL7Q14999 1698 aa24.34■■□□□ 1.49
ATG9A-219ENST00000466217 DIP2BQ9P265 1576 aa24.33■■□□□ 1.48
ATG9A-219ENST00000466217 PTPRGP23470 1445 aa24.19■■□□□ 1.46
ATG9A-219ENST00000466217 CARMIL1Q5VZK9 1371 aa24.19■■□□□ 1.46
ATG9A-219ENST00000466217 KDM6BO15054 1643 aa24.17■■□□□ 1.46
ATG9A-219ENST00000466217 CARMIL2Q6F5E8 1435 aa24.15■■□□□ 1.46
ATG9A-219ENST00000466217 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.45
ATG9A-219ENST00000466217 ABCC2Q92887 1545 aa24.11■■□□□ 1.45
ATG9A-219ENST00000466217 IQGAP2Q13576 1575 aa24.09■■□□□ 1.45
ATG9A-219ENST00000466217 TSPOAP1O95153 1857 aa24.09■■□□□ 1.45
ATG9A-219ENST00000466217 UHRF1BP1LA0JNW5 1464 aa24.07■■□□□ 1.44
ATG9A-219ENST00000466217 PLB1Q6P1J6 1458 aa24.07■■□□□ 1.44
ATG9A-219ENST00000466217 KDM4FA0A1W2PPD8 638 aa24.05■■□□□ 1.44
ATG9A-219ENST00000466217 GLI2P10070 1586 aa24.04■■□□□ 1.44
ATG9A-219ENST00000466217 ASXL2Q76L83 1435 aa24.04■■□□□ 1.44
ATG9A-219ENST00000466217 UACAQ9BZF9 1416 aa24.01■■□□□ 1.43
ATG9A-219ENST00000466217 DISP1Q96F81 1524 aa24■■□□□ 1.43
ATG9A-219ENST00000466217 TTBK1Q5TCY1 1321 aaPredicted RBP24■■□□□ 1.43
ATG9A-219ENST00000466217 PPRC1Q5VV67 1664 aaKnown RBP23.96■■□□□ 1.43
ATG9A-219ENST00000466217 UGGT2Q9NYU1 1516 aa23.96■■□□□ 1.43
ATG9A-219ENST00000466217 KDM5BQ9UGL1 1544 aa23.94■■□□□ 1.42
ATG9A-219ENST00000466217 RAPGEF2Q9Y4G8 1499 aa23.94■■□□□ 1.42
ATG9A-219ENST00000466217 EPRSP07814 1512 aaKnown RBP23.9■■□□□ 1.42
ATG9A-219ENST00000466217 KIAA0556O60303 1618 aa23.87■■□□□ 1.41
ATG9A-219ENST00000466217 MAP3K4Q9Y6R4 1608 aa23.87■■□□□ 1.41
ATG9A-219ENST00000466217 TEX14Q8IWB6 1497 aa23.85■■□□□ 1.41
ATG9A-219ENST00000466217 ZCCHC11Q5TAX3 1644 aaKnown RBP23.84■■□□□ 1.41
ATG9A-219ENST00000466217 COL17A1Q9UMD9 1497 aaPredicted RBP23.82■■□□□ 1.4
ATG9A-219ENST00000466217 ADGRL1O94910 1474 aa23.8■■□□□ 1.4
ATG9A-219ENST00000466217 WDR7Q9Y4E6 1490 aa23.78■■□□□ 1.4
ATG9A-219ENST00000466217 GOLGA3Q08378 1498 aa23.74■■□□□ 1.39
ATG9A-219ENST00000466217 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
ATG9A-219ENST00000466217 ABCA8O94911 1581 aa23.69■■□□□ 1.38
ATG9A-219ENST00000466217 MAGI3Q5TCQ9 1506 aa23.69■■□□□ 1.38
ATG9A-219ENST00000466217 CFAP43Q8NDM7 1665 aa23.66■■□□□ 1.38
ATG9A-219ENST00000466217 PRXQ9BXM0 1461 aa23.65■■□□□ 1.38
ATG9A-219ENST00000466217 CD109Q6YHK3 1445 aa23.65■■□□□ 1.38
ATG9A-219ENST00000466217 ILDR1Q86SU0 546 aaPredicted RBP23.56■■□□□ 1.36
ATG9A-219ENST00000466217 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
ATG9A-219ENST00000466217 HECW2Q9P2P5 1572 aa23.54■■□□□ 1.36
ATG9A-219ENST00000466217 FAM9AQ8IZU1 332 aaPredicted RBP23.52■■□□□ 1.36
ATG9A-219ENST00000466217 ARAP3Q8WWN8 1544 aa23.5■■□□□ 1.35
ATG9A-219ENST00000466217 ATP10BO94823 1461 aa23.48■■□□□ 1.35
ATG9A-219ENST00000466217 PHLDB1Q86UU1 1377 aa23.47■■□□□ 1.35
ATG9A-219ENST00000466217 ABCA9Q8IUA7 1624 aa23.42■■□□□ 1.34
ATG9A-219ENST00000466217 KIF21BO75037 1637 aa23.41■■□□□ 1.34
ATG9A-219ENST00000466217 SAMD9Q5K651 1589 aa23.41■■□□□ 1.34
ATG9A-219ENST00000466217 P3H3Q8IVL6 736 aa23.39■■□□□ 1.33
ATG9A-219ENST00000466217 NEO1Q92859 1461 aa23.36■■□□□ 1.33
ATG9A-219ENST00000466217 ARID3CA6NKF2 412 aa23.36■■□□□ 1.33
ATG9A-219ENST00000466217 CSRNP3Q8WYN3 585 aa23.36■■□□□ 1.33
ATG9A-219ENST00000466217 RAPGEF6Q8TEU7 1601 aa23.35■■□□□ 1.33
ATG9A-219ENST00000466217 ADAMTSL3P82987 1691 aa23.29■■□□□ 1.32
ATG9A-219ENST00000466217 NUP153P49790 1475 aaKnown RBP23.28■■□□□ 1.32
ATG9A-219ENST00000466217 EEA1Q15075 1411 aa23.27■■□□□ 1.32
ATG9A-219ENST00000466217 RAPGEF3O95398 923 aa23.27■■□□□ 1.32
ATG9A-219ENST00000466217 PTPRMP28827 1452 aa23.27■■□□□ 1.32
ATG9A-219ENST00000466217 FRMPD1Q5SYB0 1578 aa23.25■■□□□ 1.31
ATG9A-219ENST00000466217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.24■■□□□ 1.31
ATG9A-219ENST00000466217 HNRNPUL2Q1KMD3 747 aaKnown RBP23.24■■□□□ 1.31
ATG9A-219ENST00000466217 BCORL1Q5H9F3 1711 aa23.21■■□□□ 1.31
ATG9A-219ENST00000466217 FHOD3Q2V2M9 1422 aa23.2■■□□□ 1.3
ATG9A-219ENST00000466217 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
ATG9A-219ENST00000466217 ARHGEF40Q8TER5 1519 aa23.17■■□□□ 1.3
ATG9A-219ENST00000466217 DENND4BO75064 1496 aaPredicted RBP23.17■■□□□ 1.3
ATG9A-219ENST00000466217 CFAP74Q9C0B2 1584 aa23.15■■□□□ 1.3
ATG9A-219ENST00000466217 MADDQ8WXG6 1647 aa23.15■■□□□ 1.3
ATG9A-219ENST00000466217 EFCAB5A4FU69 1503 aa23.14■■□□□ 1.3
ATG9A-219ENST00000466217 AKNAQ7Z591 1439 aa23.14■■□□□ 1.29
ATG9A-219ENST00000466217 RICTORQ6R327 1708 aa23.13■■□□□ 1.29
ATG9A-219ENST00000466217 ARID4BQ4LE39 1312 aaPredicted RBP23.13■■□□□ 1.29
ATG9A-219ENST00000466217 FANCAO15360 1455 aa23.12■■□□□ 1.29
ATG9A-219ENST00000466217 FBXO41Q8TF61 875 aa23.12■■□□□ 1.29
ATG9A-219ENST00000466217 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.12■■□□□ 1.29
ATG9A-219ENST00000466217 PCF11O94913 1555 aaKnown RBP23.11■■□□□ 1.29
ATG9A-219ENST00000466217 ZMYM4Q5VZL5 1548 aa23.09■■□□□ 1.29
ATG9A-219ENST00000466217 RANGAP1P46060 587 aaPredicted RBP23.09■■□□□ 1.29
ATG9A-219ENST00000466217 LMTK3Q96Q04 1460 aa23.08■■□□□ 1.29
ATG9A-219ENST00000466217 MAGI2Q86UL8 1455 aa23.06■■□□□ 1.28
ATG9A-219ENST00000466217 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
ATG9A-219ENST00000466217 POGZQ7Z3K3 1410 aa23.05■■□□□ 1.28
ATG9A-219ENST00000466217 RIMS1Q86UR5 1692 aaKnown RBP23.03■■□□□ 1.28
ATG9A-219ENST00000466217 ZFYVE16Q7Z3T8 1539 aa23.02■■□□□ 1.28
ATG9A-219ENST00000466217 PLCH2O75038 1416 aa22.99■■□□□ 1.27
ATG9A-219ENST00000466217 YEATS2Q9ULM3 1422 aa22.99■■□□□ 1.27
ATG9A-219ENST00000466217 CDK13Q14004 1512 aaKnown RBP22.99■■□□□ 1.27
ATG9A-219ENST00000466217 HECW1Q76N89 1606 aa22.96■■□□□ 1.27
ATG9A-219ENST00000466217 SCAPERQ9BY12 1400 aa22.95■■□□□ 1.26
ATG9A-219ENST00000466217 SIGLEC1Q9BZZ2 1709 aa22.94■■□□□ 1.26
ATG9A-219ENST00000466217 FMN1Q68DA7 1419 aa22.94■■□□□ 1.26
ATG9A-219ENST00000466217 EFCAB2Q5VUJ9 269 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms