RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
DDR1-242ENST00000465966 ABCC10Q5T3U5 1492 aa15.14■□□□□ 0.01
DDR1-242ENST00000465966 MAPKBP1O60336 1514 aa15.09■□□□□ 0.01
DDR1-242ENST00000465966 KIF13AQ9H1H9 1805 aa15.08■□□□□ 0
DDR1-242ENST00000465966 RUSC2Q8N2Y8 1516 aa15.05■□□□□ -0
DDR1-242ENST00000465966 KIAA0586Q9BVV6 1533 aa15.04■□□□□ -0
DDR1-242ENST00000465966 KDM4FA0A1W2PPD8 638 aa15.03■□□□□ -0
DDR1-242ENST00000465966 DIP2BQ9P265 1576 aa15.02■□□□□ -0
DDR1-242ENST00000465966 IGF1RP08069 1367 aa15□□□□□ -0.01
DDR1-242ENST00000465966 ADCY10Q96PN6 1610 aa15□□□□□ -0.01
DDR1-242ENST00000465966 PTPRGP23470 1445 aa15□□□□□ -0.01
DDR1-242ENST00000465966 KDM6BO15054 1643 aa14.99□□□□□ -0.01
DDR1-242ENST00000465966 KIF27Q86VH2 1401 aa14.99□□□□□ -0.01
DDR1-242ENST00000465966 TTBK1Q5TCY1 1321 aaPredicted RBP14.97□□□□□ -0.01
DDR1-242ENST00000465966 CARMIL2Q6F5E8 1435 aa14.95□□□□□ -0.02
DDR1-242ENST00000465966 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
DDR1-242ENST00000465966 CARMIL1Q5VZK9 1371 aa14.92□□□□□ -0.02
DDR1-242ENST00000465966 CUL7Q14999 1698 aa14.9□□□□□ -0.02
DDR1-242ENST00000465966 PLB1Q6P1J6 1458 aa14.9□□□□□ -0.02
DDR1-242ENST00000465966 ABCC2Q92887 1545 aa14.9□□□□□ -0.02
DDR1-242ENST00000465966 ASXL2Q76L83 1435 aa14.89□□□□□ -0.03
DDR1-242ENST00000465966 ILDR1Q86SU0 546 aaPredicted RBP14.88□□□□□ -0.03
DDR1-242ENST00000465966 TSPOAP1O95153 1857 aa14.86□□□□□ -0.03
DDR1-242ENST00000465966 UACAQ9BZF9 1416 aa14.85□□□□□ -0.03
DDR1-242ENST00000465966 UHRF1BP1LA0JNW5 1464 aa14.84□□□□□ -0.03
DDR1-242ENST00000465966 GLI2P10070 1586 aa14.83□□□□□ -0.04
DDR1-242ENST00000465966 ADGRL1O94910 1474 aa14.81□□□□□ -0.04
DDR1-242ENST00000465966 IQGAP2Q13576 1575 aa14.81□□□□□ -0.04
DDR1-242ENST00000465966 TEX14Q8IWB6 1497 aa14.8□□□□□ -0.04
DDR1-242ENST00000465966 EPRSP07814 1512 aaKnown RBP14.78□□□□□ -0.04
DDR1-242ENST00000465966 KDM5BQ9UGL1 1544 aa14.76□□□□□ -0.05
DDR1-242ENST00000465966 DISP1Q96F81 1524 aa14.76□□□□□ -0.05
DDR1-242ENST00000465966 COL17A1Q9UMD9 1497 aaPredicted RBP14.76□□□□□ -0.05
DDR1-242ENST00000465966 RAPGEF2Q9Y4G8 1499 aa14.73□□□□□ -0.05
DDR1-242ENST00000465966 PPRC1Q5VV67 1664 aaKnown RBP14.73□□□□□ -0.05
DDR1-242ENST00000465966 UGGT2Q9NYU1 1516 aa14.71□□□□□ -0.06
DDR1-242ENST00000465966 MAP3K4Q9Y6R4 1608 aa14.7□□□□□ -0.06
DDR1-242ENST00000465966 WDR7Q9Y4E6 1490 aa14.69□□□□□ -0.06
DDR1-242ENST00000465966 KCNH8Q96L42 1107 aa14.69□□□□□ -0.06
DDR1-242ENST00000465966 FAM9AQ8IZU1 332 aaPredicted RBP14.68□□□□□ -0.06
DDR1-242ENST00000465966 CD109Q6YHK3 1445 aa14.67□□□□□ -0.06
DDR1-242ENST00000465966 ZCCHC11Q5TAX3 1644 aaKnown RBP14.66□□□□□ -0.06
DDR1-242ENST00000465966 HECW2Q9P2P5 1572 aa14.66□□□□□ -0.06
DDR1-242ENST00000465966 KIAA0556O60303 1618 aa14.66□□□□□ -0.06
DDR1-242ENST00000465966 GOLGA3Q08378 1498 aa14.63□□□□□ -0.07
DDR1-242ENST00000465966 MAGI3Q5TCQ9 1506 aa14.63□□□□□ -0.07
DDR1-242ENST00000465966 CFAP43Q8NDM7 1665 aa14.55□□□□□ -0.08
DDR1-242ENST00000465966 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
DDR1-242ENST00000465966 PHLDB1Q86UU1 1377 aa14.54□□□□□ -0.08
DDR1-242ENST00000465966 ABCA8O94911 1581 aa14.54□□□□□ -0.08
DDR1-242ENST00000465966 ARID3CA6NKF2 412 aa14.53□□□□□ -0.08
DDR1-242ENST00000465966 ARAP3Q8WWN8 1544 aa14.52□□□□□ -0.08
DDR1-242ENST00000465966 P3H3Q8IVL6 736 aa14.5□□□□□ -0.09
DDR1-242ENST00000465966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.49□□□□□ -0.09
DDR1-242ENST00000465966 HNRNPUL2Q1KMD3 747 aaKnown RBP14.49□□□□□ -0.09
DDR1-242ENST00000465966 ARID4BQ4LE39 1312 aaPredicted RBP14.48□□□□□ -0.09
DDR1-242ENST00000465966 RAPGEF3O95398 923 aa14.48□□□□□ -0.09
DDR1-242ENST00000465966 ATP10BO94823 1461 aa14.47□□□□□ -0.09
DDR1-242ENST00000465966 PRXQ9BXM0 1461 aa14.47□□□□□ -0.09
DDR1-242ENST00000465966 CTTNBP2Q8WZ74 1663 aa14.46□□□□□ -0.09
DDR1-242ENST00000465966 PTPRMP28827 1452 aa14.46□□□□□ -0.09
DDR1-242ENST00000465966 KIF21BO75037 1637 aa14.46□□□□□ -0.09
DDR1-242ENST00000465966 NEO1Q92859 1461 aa14.44□□□□□ -0.1
DDR1-242ENST00000465966 ABCA9Q8IUA7 1624 aa14.4□□□□□ -0.1
DDR1-242ENST00000465966 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
DDR1-242ENST00000465966 ADAMTSL3P82987 1691 aa14.38□□□□□ -0.11
DDR1-242ENST00000465966 CSRNP3Q8WYN3 585 aa14.37□□□□□ -0.11
DDR1-242ENST00000465966 PCF11O94913 1555 aaKnown RBP14.35□□□□□ -0.11
DDR1-242ENST00000465966 RANGAP1P46060 587 aaPredicted RBP14.35□□□□□ -0.11
DDR1-242ENST00000465966 POGZQ7Z3K3 1410 aa14.34□□□□□ -0.11
DDR1-242ENST00000465966 DENND4BO75064 1496 aaPredicted RBP14.34□□□□□ -0.11
DDR1-242ENST00000465966 LMTK3Q96Q04 1460 aa14.33□□□□□ -0.12
DDR1-242ENST00000465966 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
DDR1-242ENST00000465966 RAPGEF6Q8TEU7 1601 aa14.33□□□□□ -0.12
DDR1-242ENST00000465966 BCORL1Q5H9F3 1711 aa14.32□□□□□ -0.12
DDR1-242ENST00000465966 AKNAQ7Z591 1439 aa14.32□□□□□ -0.12
DDR1-242ENST00000465966 NUP153P49790 1475 aaKnown RBP14.31□□□□□ -0.12
DDR1-242ENST00000465966 MADDQ8WXG6 1647 aa14.3□□□□□ -0.12
DDR1-242ENST00000465966 HSPA2P54652 639 aa14.3□□□□□ -0.12
DDR1-242ENST00000465966 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
DDR1-242ENST00000465966 SAMD9Q5K651 1589 aa14.3□□□□□ -0.12
DDR1-242ENST00000465966 FANCAO15360 1455 aa14.29□□□□□ -0.12
DDR1-242ENST00000465966 FRMPD1Q5SYB0 1578 aa14.29□□□□□ -0.12
DDR1-242ENST00000465966 ARHGEF40Q8TER5 1519 aa14.28□□□□□ -0.12
DDR1-242ENST00000465966 MLECQ14165 292 aa14.27□□□□□ -0.13
DDR1-242ENST00000465966 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.13
DDR1-242ENST00000465966 CERKQ8TCT0 537 aa14.26□□□□□ -0.13
DDR1-242ENST00000465966 MAGI2Q86UL8 1455 aa14.25□□□□□ -0.13
DDR1-242ENST00000465966 EEA1Q15075 1411 aa14.24□□□□□ -0.13
DDR1-242ENST00000465966 CFAP74Q9C0B2 1584 aa14.23□□□□□ -0.13
DDR1-242ENST00000465966 EFCAB5A4FU69 1503 aa14.23□□□□□ -0.13
DDR1-242ENST00000465966 ZFYVE16Q7Z3T8 1539 aa14.23□□□□□ -0.13
DDR1-242ENST00000465966 RIMS1Q86UR5 1692 aaKnown RBP14.23□□□□□ -0.13
DDR1-242ENST00000465966 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.22□□□□□ -0.13
DDR1-242ENST00000465966 YEATS2Q9ULM3 1422 aa14.22□□□□□ -0.13
DDR1-242ENST00000465966 SCAPERQ9BY12 1400 aa14.21□□□□□ -0.13
DDR1-242ENST00000465966 ZMYM4Q5VZL5 1548 aa14.2□□□□□ -0.14
DDR1-242ENST00000465966 DMRT2Q9Y5R5 561 aa14.2□□□□□ -0.14
DDR1-242ENST00000465966 RICTORQ6R327 1708 aa14.19□□□□□ -0.14
DDR1-242ENST00000465966 PLCH2O75038 1416 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms