RNA–Protein interactions for RNA: ENST00000465567.1

TTC19-202, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 1 (best)

Gene TTC19, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-202ENST00000465567 DCAF1Q9Y4B6 1507 aa7.38□□□□□ -1.23
TTC19-202ENST00000465567 HSP90B1P14625 803 aaKnown RBP7.38□□□□□ -1.23
TTC19-202ENST00000465567 CHMP4AQ9BY43 222 aa7.38□□□□□ -1.23
TTC19-202ENST00000465567 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.38□□□□□ -1.23
TTC19-202ENST00000465567 UBE2Q2Q8WVN8 375 aa7.38□□□□□ -1.23
TTC19-202ENST00000465567 MYO15BQ96JP2 1530 aa7.38□□□□□ -1.23
TTC19-202ENST00000465567 OSCARQ8IYS5 282 aa7.36□□□□□ -1.23
TTC19-202ENST00000465567 PUS7Q96PZ0 661 aaKnown RBP7.36□□□□□ -1.23
TTC19-202ENST00000465567 IGSF3O75054 1194 aa7.34□□□□□ -1.23
TTC19-202ENST00000465567 BCL11AQ9H165 835 aa7.34□□□□□ -1.23
TTC19-202ENST00000465567 PAXIP1Q6ZW49 1069 aaPredicted RBP7.34□□□□□ -1.23
TTC19-202ENST00000465567 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
TTC19-202ENST00000465567 PCGF6Q9BYE7 350 aa7.32□□□□□ -1.24
TTC19-202ENST00000465567 TSHZ2Q9NRE2 1034 aa7.32□□□□□ -1.24
TTC19-202ENST00000465567 SPDYE2BA6NHP3 402 aa7.31□□□□□ -1.24
TTC19-202ENST00000465567 SPDYE6P0CI01 402 aa7.31□□□□□ -1.24
TTC19-202ENST00000465567 SPDYE2Q495Y8 402 aa7.31□□□□□ -1.24
TTC19-202ENST00000465567 RBM42Q9BTD8 480 aaKnown RBP7.3□□□□□ -1.24
TTC19-202ENST00000465567 SPDYE4A6NLX3 237 aa7.3□□□□□ -1.24
TTC19-202ENST00000465567 ZNF692Q9BU19 519 aaPredicted RBP7.28□□□□□ -1.24
TTC19-202ENST00000465567 PKD2Q13563 968 aa7.28□□□□□ -1.24
TTC19-202ENST00000465567 ZBTB7CA1YPR0 619 aa7.27□□□□□ -1.25
TTC19-202ENST00000465567 CFAP44Q96MT7 982 aa7.27□□□□□ -1.25
TTC19-202ENST00000465567 NPM1P06748 294 aaKnown RBP eCLIP7.26□□□□□ -1.25
TTC19-202ENST00000465567 SSUH2Q9Y2M2 353 aa7.25□□□□□ -1.25
TTC19-202ENST00000465567 ZEB1P37275 1124 aaPredicted RBP7.24□□□□□ -1.25
TTC19-202ENST00000465567 TAF7LQ5H9L4 462 aa7.23□□□□□ -1.25
TTC19-202ENST00000465567 AKT1S1Q96B36 256 aa7.21□□□□□ -1.25
TTC19-202ENST00000465567 ZMYND15Q9H091 742 aa7.21□□□□□ -1.26
TTC19-202ENST00000465567 BRPF1P55201 1214 aaPredicted RBP7.2□□□□□ -1.26
TTC19-202ENST00000465567 SPRYD3Q8NCJ5 442 aa7.2□□□□□ -1.26
TTC19-202ENST00000465567 NECTIN2Q92692 538 aa7.2□□□□□ -1.26
TTC19-202ENST00000465567 PROM2Q8N271 834 aa7.19□□□□□ -1.26
TTC19-202ENST00000465567 PDE4CQ08493 712 aa7.19□□□□□ -1.26
TTC19-202ENST00000465567 PPARGC1BQ86YN6 1023 aaKnown RBP7.19□□□□□ -1.26
TTC19-202ENST00000465567 RSPH6AQ9H0K4 717 aa7.19□□□□□ -1.26
TTC19-202ENST00000465567 PABPN1Q86U42 306 aaKnown RBP eCLIP7.18□□□□□ -1.26
TTC19-202ENST00000465567 ABCC9O60706 1549 aa7.15□□□□□ -1.26
TTC19-202ENST00000465567 REM2Q8IYK8 340 aaPredicted RBP7.14□□□□□ -1.27
TTC19-202ENST00000465567 RGS22Q8NE09 1264 aa7.14□□□□□ -1.27
TTC19-202ENST00000465567 DHX37Q8IY37 1157 aaKnown RBP7.14□□□□□ -1.27
TTC19-202ENST00000465567 FAM9AQ8IZU1 332 aaPredicted RBP7.13□□□□□ -1.27
TTC19-202ENST00000465567 NEFLP07196 543 aa7.13□□□□□ -1.27
TTC19-202ENST00000465567 C1orf115Q9H7X2 142 aa7.11□□□□□ -1.27
TTC19-202ENST00000465567 BCCIPQ9P287 314 aaKnown RBP eCLIP7.1□□□□□ -1.27
TTC19-202ENST00000465567 SPDYE1Q8NFV5 336 aaPredicted RBP7.09□□□□□ -1.28
TTC19-202ENST00000465567 IFNLR1Q8IU57 520 aaPredicted RBP7.08□□□□□ -1.28
TTC19-202ENST00000465567 STAG3Q9UJ98 1225 aa7.06□□□□□ -1.28
TTC19-202ENST00000465567 PITPNM1O00562 1244 aa7.05□□□□□ -1.28
TTC19-202ENST00000465567 VASPP50552 380 aaPredicted RBP7.05□□□□□ -1.28
TTC19-202ENST00000465567 CLEC11AQ9Y240 323 aa7.05□□□□□ -1.28
TTC19-202ENST00000465567 RB1CC1Q8TDY2 1594 aa7.04□□□□□ -1.28
TTC19-202ENST00000465567 RSPH4AQ5TD94 716 aa7.03□□□□□ -1.28
TTC19-202ENST00000465567 KCTD17Q8N5Z5 321 aa7.03□□□□□ -1.28
TTC19-202ENST00000465567 ARID3AQ99856 593 aa7.03□□□□□ -1.28
TTC19-202ENST00000465567 RSF1Q96T23 1441 aaPredicted RBP7.03□□□□□ -1.28
TTC19-202ENST00000465567 TRIM41Q8WV44 630 aa7.02□□□□□ -1.29
TTC19-202ENST00000465567 RAD21O60216 631 aa7□□□□□ -1.29
TTC19-202ENST00000465567 TRAIPQ9BWF2 469 aa7□□□□□ -1.29
TTC19-202ENST00000465567 PRR29P0C7W0 189 aa7□□□□□ -1.29
TTC19-202ENST00000465567 CHRDL2Q6WN34 429 aa6.99□□□□□ -1.29
TTC19-202ENST00000465567 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.98□□□□□ -1.29
TTC19-202ENST00000465567 MTMR7Q9Y216 660 aa6.98□□□□□ -1.29
TTC19-202ENST00000465567 PKNOX2Q96KN3 472 aa6.97□□□□□ -1.29
TTC19-202ENST00000465567 TICAM2Q86XR7 235 aa6.97□□□□□ -1.29
TTC19-202ENST00000465567 FGD1P98174 961 aa6.96□□□□□ -1.29
TTC19-202ENST00000465567 SCRIBQ14160 1630 aa6.96□□□□□ -1.3
TTC19-202ENST00000465567 NEUROD2Q15784 382 aa6.95□□□□□ -1.3
TTC19-202ENST00000465567 CC2D2BQ6DHV5 1058 aa6.95□□□□□ -1.3
TTC19-202ENST00000465567 ZNF326Q5BKZ1 582 aaKnown RBP6.94□□□□□ -1.3
TTC19-202ENST00000465567 POLR3GLQ9BT43 218 aa6.94□□□□□ -1.3
TTC19-202ENST00000465567 ECM2O94769 699 aaPredicted RBP6.93□□□□□ -1.3
TTC19-202ENST00000465567 CLSTN1O94985 981 aa6.93□□□□□ -1.3
TTC19-202ENST00000465567 BCL11BQ9C0K0 894 aaPredicted RBP6.93□□□□□ -1.3
TTC19-202ENST00000465567 CENPBP07199 599 aaPredicted RBP6.93□□□□□ -1.3
TTC19-202ENST00000465567 FXR2P51116 673 aaKnown RBP eCLIP6.93□□□□□ -1.3
TTC19-202ENST00000465567 FAM177A1Q8N128 213 aaPredicted RBP6.93□□□□□ -1.3
TTC19-202ENST00000465567 MIER1Q8N108 512 aa6.92□□□□□ -1.3
TTC19-202ENST00000465567 LMOD2Q6P5Q4 547 aa6.91□□□□□ -1.3
TTC19-202ENST00000465567 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.91□□□□□ -1.3
TTC19-202ENST00000465567 ACIN1Q9UKV3 1341 aaKnown RBP6.91□□□□□ -1.3
TTC19-202ENST00000465567 PLCD3Q8N3E9 789 aa6.91□□□□□ -1.3
TTC19-202ENST00000465567 PIP4P2Q8N4L2 257 aa6.91□□□□□ -1.3
TTC19-202ENST00000465567 RBM25P49756 843 aaKnown RBP6.9□□□□□ -1.3
TTC19-202ENST00000465567 CREBZFQ9NS37 354 aa6.9□□□□□ -1.3
TTC19-202ENST00000465567 ZNF428Q96B54 188 aa6.9□□□□□ -1.31
TTC19-202ENST00000465567 E9PSI1 815 aa6.89□□□□□ -1.31
TTC19-202ENST00000465567 APBB1O00213 710 aa6.89□□□□□ -1.31
TTC19-202ENST00000465567 NACADO15069 1562 aa6.89□□□□□ -1.31
TTC19-202ENST00000465567 CUX2O14529 1486 aa6.88□□□□□ -1.31
TTC19-202ENST00000465567 RGL2O15211 777 aa6.88□□□□□ -1.31
TTC19-202ENST00000465567 PRKAR2AP13861 404 aaKnown RBP6.88□□□□□ -1.31
TTC19-202ENST00000465567 CCER1Q8TC90 406 aaPredicted RBP6.88□□□□□ -1.31
TTC19-202ENST00000465567 MFAP1P55081 439 aaKnown RBP6.87□□□□□ -1.31
TTC19-202ENST00000465567 TMCO4Q5TGY1 634 aa6.87□□□□□ -1.31
TTC19-202ENST00000465567 CHADLQ6NUI6 762 aa6.87□□□□□ -1.31
TTC19-202ENST00000465567 WRNQ14191 1432 aaPredicted RBP eCLIP6.87□□□□□ -1.31
TTC19-202ENST00000465567 ARID3CA6NKF2 412 aa6.86□□□□□ -1.31
TTC19-202ENST00000465567 FOXD4L5Q5VV16 416 aaPredicted RBP6.86□□□□□ -1.31
TTC19-202ENST00000465567 CERS3Q8IU89 383 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms