RNA–Protein interactions for RNA: ENST00000465567.1

TTC19-202, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 1 (best)

Gene TTC19, Length 2,801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-202ENST00000465567 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
TTC19-202ENST00000465567 CHIC1Q5VXU3 224 aa12.64□□□□□ -0.39
TTC19-202ENST00000465567 PHF23Q9BUL5 403 aaPredicted RBP11.12□□□□□ -0.63
TTC19-202ENST00000465567 SENP3Q9H4L4 574 aaPredicted RBP10.98□□□□□ -0.65
TTC19-202ENST00000465567 PLPPR3Q6T4P5 718 aa10.27□□□□□ -0.77
TTC19-202ENST00000465567 FOXD1Q16676 465 aa10.18□□□□□ -0.78
TTC19-202ENST00000465567 SLC24A1O60721 1099 aa10.05□□□□□ -0.8
TTC19-202ENST00000465567 PPP6R1Q9UPN7 881 aa9.82□□□□□ -0.84
TTC19-202ENST00000465567 ADRA2BP18089 450 aa9.79□□□□□ -0.84
TTC19-202ENST00000465567 PIAS4Q8N2W9 510 aaPredicted RBP9.6□□□□□ -0.87
TTC19-202ENST00000465567 MSH5O43196 834 aa9.39□□□□□ -0.91
TTC19-202ENST00000465567 DAXXQ9UER7 740 aaPredicted RBP9.18□□□□□ -0.94
TTC19-202ENST00000465567 EHMT2Q96KQ7 1210 aa9.15□□□□□ -0.94
TTC19-202ENST00000465567 NCBP3Q53F19 620 aaKnown RBP9.08□□□□□ -0.96
TTC19-202ENST00000465567 PPP4R3CPQ6ZMV5 832 aa9.04□□□□□ -0.96
TTC19-202ENST00000465567 SCAF1Q9H7N4 1312 aaKnown RBP8.97□□□□□ -0.97
TTC19-202ENST00000465567 RTN4Q9NQC3 1192 aaKnown RBP8.96□□□□□ -0.97
TTC19-202ENST00000465567 AMER1Q5JTC6 1135 aaPredicted RBP8.96□□□□□ -0.98
TTC19-202ENST00000465567 MAPK8IP2Q13387 824 aaPredicted RBP8.89□□□□□ -0.99
TTC19-202ENST00000465567 TTBK1Q5TCY1 1321 aaPredicted RBP8.86□□□□□ -0.99
TTC19-202ENST00000465567 NISCHQ9Y2I1 1504 aa8.84□□□□□ -0.99
TTC19-202ENST00000465567 KCNA4P22459 653 aa8.84□□□□□ -0.99
TTC19-202ENST00000465567 CNKSR2Q8WXI2 1034 aa8.79□□□□□ -1
TTC19-202ENST00000465567 DMRT2Q9Y5R5 561 aa8.76□□□□□ -1.01
TTC19-202ENST00000465567 ARXQ96QS3 562 aa8.73□□□□□ -1.01
TTC19-202ENST00000465567 APLP2Q06481 763 aa8.72□□□□□ -1.01
TTC19-202ENST00000465567 MYT1Q01538 1121 aa8.71□□□□□ -1.02
TTC19-202ENST00000465567 CSRNP3Q8WYN3 585 aa8.71□□□□□ -1.02
TTC19-202ENST00000465567 NPM3O75607 178 aaKnown RBP8.68□□□□□ -1.02
TTC19-202ENST00000465567 PELP1Q8IZL8 1130 aaKnown RBP8.65□□□□□ -1.03
TTC19-202ENST00000465567 RNF216Q9NWF9 866 aaPredicted RBP8.62□□□□□ -1.03
TTC19-202ENST00000465567 HOXD11P31277 338 aaPredicted RBP8.59□□□□□ -1.03
TTC19-202ENST00000465567 POTEDQ86YR6 584 aa8.54□□□□□ -1.04
TTC19-202ENST00000465567 PRKCSHP14314 528 aaPredicted RBP8.5□□□□□ -1.05
TTC19-202ENST00000465567 ERICH6Q7L0X2 663 aa8.5□□□□□ -1.05
TTC19-202ENST00000465567 DNAJC5BQ9UF47 199 aa8.45□□□□□ -1.06
TTC19-202ENST00000465567 TIMELESSQ9UNS1 1208 aa8.44□□□□□ -1.06
TTC19-202ENST00000465567 SLC4A1APQ9BWU0 796 aaKnown RBP8.41□□□□□ -1.06
TTC19-202ENST00000465567 TAOK2Q9UL54 1235 aa8.4□□□□□ -1.06
TTC19-202ENST00000465567 HOMEZQ8IX15 550 aa8.37□□□□□ -1.07
TTC19-202ENST00000465567 DCAF8L1A6NGE4 600 aa8.36□□□□□ -1.07
TTC19-202ENST00000465567 BCANQ96GW7 911 aa8.35□□□□□ -1.07
TTC19-202ENST00000465567 RANGAP1P46060 587 aaPredicted RBP8.31□□□□□ -1.08
TTC19-202ENST00000465567 TULP1O00294 542 aaPredicted RBP8.27□□□□□ -1.09
TTC19-202ENST00000465567 SLC4A2P04920 1241 aa8.2□□□□□ -1.1
TTC19-202ENST00000465567 PLCB2Q00722 1185 aa8.18□□□□□ -1.1
TTC19-202ENST00000465567 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.17□□□□□ -1.15e-8■■□□□ 14.4
TTC19-202ENST00000465567 TPRNQ4KMQ1 711 aa8.16□□□□□ -1.1
TTC19-202ENST00000465567 GTF3C3Q9Y5Q9 886 aa8.14□□□□□ -1.11
TTC19-202ENST00000465567 ZBTB22O15209 634 aa8.13□□□□□ -1.11
TTC19-202ENST00000465567 FOXD4L1Q9NU39 408 aa8.13□□□□□ -1.11
TTC19-202ENST00000465567 KLHL34Q8N239 644 aa8.06□□□□□ -1.12
TTC19-202ENST00000465567 RNF39Q9H2S5 420 aa8.05□□□□□ -1.12
TTC19-202ENST00000465567 U3KPZ7 1027 aaPredicted RBP8.04□□□□□ -1.12
TTC19-202ENST00000465567 PODXL2Q9NZ53 605 aa8.03□□□□□ -1.12
TTC19-202ENST00000465567 MYCNP04198 464 aaPredicted RBP8.02□□□□□ -1.13
TTC19-202ENST00000465567 VSIG10Q8N0Z9 540 aa8.02□□□□□ -1.13
TTC19-202ENST00000465567 FBXO3Q9UK99 471 aa7.99□□□□□ -1.13
TTC19-202ENST00000465567 EIF5BO60841 1220 aaKnown RBP7.99□□□□□ -1.13
TTC19-202ENST00000465567 TMEM132AQ24JP5 1023 aa7.97□□□□□ -1.13
TTC19-202ENST00000465567 HAP1P54257 671 aaPredicted RBP7.97□□□□□ -1.13
TTC19-202ENST00000465567 C1QBPQ07021 282 aaKnown RBP7.96□□□□□ -1.13
TTC19-202ENST00000465567 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.96□□□□□ -1.14
TTC19-202ENST00000465567 HNRNPUL2Q1KMD3 747 aaKnown RBP7.96□□□□□ -1.14
TTC19-202ENST00000465567 NPM2Q86SE8 214 aaKnown RBP7.93□□□□□ -1.14
TTC19-202ENST00000465567 SAMD1Q6SPF0 538 aaPredicted RBP7.92□□□□□ -1.14
TTC19-202ENST00000465567 ATXN8OSP0DMR3 200 aa7.86□□□□□ -1.15
TTC19-202ENST00000465567 CACNB1Q02641 598 aaPredicted RBP7.83□□□□□ -1.16
TTC19-202ENST00000465567 SPINK5Q9NQ38 1064 aaPredicted RBP7.82□□□□□ -1.16
TTC19-202ENST00000465567 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
TTC19-202ENST00000465567 ATF5Q9Y2D1 282 aaPredicted RBP7.8□□□□□ -1.16
TTC19-202ENST00000465567 CAPN15O75808 1086 aa7.78□□□□□ -1.16
TTC19-202ENST00000465567 KDM2AQ9Y2K7 1162 aa7.76□□□□□ -1.17
TTC19-202ENST00000465567 ZNF219Q9P2Y4 722 aaPredicted RBP7.75□□□□□ -1.17
TTC19-202ENST00000465567 TRHP20396 242 aaPredicted RBP7.75□□□□□ -1.17
TTC19-202ENST00000465567 TRIM26Q12899 539 aaPredicted RBP7.73□□□□□ -1.17
TTC19-202ENST00000465567 FKBP8Q14318 412 aa7.7□□□□□ -1.18
TTC19-202ENST00000465567 DNAJC5Q9H3Z4 198 aa7.7□□□□□ -1.18
TTC19-202ENST00000465567 HRCP23327 699 aa7.68□□□□□ -1.18
TTC19-202ENST00000465567 DCAF8L2P0C7V8 631 aa7.67□□□□□ -1.18
TTC19-202ENST00000465567 DSG3P32926 999 aa7.66□□□□□ -1.18
TTC19-202ENST00000465567 POLA2Q14181 598 aa7.63□□□□□ -1.19
TTC19-202ENST00000465567 ABCB7O75027 752 aa7.62□□□□□ -1.19
TTC19-202ENST00000465567 LOC105371045A0A1W2PR82 267 aa7.61□□□□□ -1.19
TTC19-202ENST00000465567 FBLN2P98095 1184 aa7.61□□□□□ -1.19
TTC19-202ENST00000465567 UBTFP17480 764 aaKnown RBP7.58□□□□□ -1.2
TTC19-202ENST00000465567 PLEKHG5O94827 1062 aa7.58□□□□□ -1.2
TTC19-202ENST00000465567 SUPT5HO00267 1087 aaKnown RBP7.56□□□□□ -1.2
TTC19-202ENST00000465567 SHROOM4Q9ULL8 1493 aa7.54□□□□□ -1.2
TTC19-202ENST00000465567 ZCCHC6Q5VYS8 1495 aaKnown RBP7.53□□□□□ -1.2
TTC19-202ENST00000465567 CCDC180Q9P1Z9 1646 aa7.51□□□□□ -1.21
TTC19-202ENST00000465567 ZBTB12Q9Y330 459 aaPredicted RBP7.5□□□□□ -1.21
TTC19-202ENST00000465567 CDK11AQ9UQ88 783 aaPredicted RBP7.47□□□□□ -1.21
TTC19-202ENST00000465567 HMGB1P09429 215 aaKnown RBP7.46□□□□□ -1.21
TTC19-202ENST00000465567 MKRN4PQ13434 485 aaPredicted RBP7.46□□□□□ -1.21
TTC19-202ENST00000465567 BBXQ8WY36 941 aaPredicted RBP7.43□□□□□ -1.22
TTC19-202ENST00000465567 PDIA4P13667 645 aaKnown RBP7.42□□□□□ -1.22
TTC19-202ENST00000465567 NBR1Q14596 966 aa7.42□□□□□ -1.22
TTC19-202ENST00000465567 CCDC9Q9Y3X0 531 aaKnown RBP7.42□□□□□ -1.22
TTC19-202ENST00000465567 CDK11BP21127 795 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms