RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 TSPOAP1O95153 1857 aa18.05■□□□□ 0.48
USP39-212ENST00000465514 FAM69CQ0P6D2 419 aa18.04■□□□□ 0.48
USP39-212ENST00000465514 MAPKBP1O60336 1514 aa18.03■□□□□ 0.48
USP39-212ENST00000465514 PRG4Q92954 1404 aaPredicted RBP17.98■□□□□ 0.47
USP39-212ENST00000465514 ADCY10Q96PN6 1610 aa17.96■□□□□ 0.47
USP39-212ENST00000465514 FHAD1B1AJZ9 1412 aa17.95■□□□□ 0.46
USP39-212ENST00000465514 HECW2Q9P2P5 1572 aa17.91■□□□□ 0.46
USP39-212ENST00000465514 RUSC2Q8N2Y8 1516 aa17.9■□□□□ 0.46
USP39-212ENST00000465514 ADGRL1O94910 1474 aa17.89■□□□□ 0.45
USP39-212ENST00000465514 NPM1P06748 294 aaKnown RBP eCLIP17.89■□□□□ 0.45
USP39-212ENST00000465514 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
USP39-212ENST00000465514 WRNQ14191 1432 aaPredicted RBP eCLIP17.87■□□□□ 0.45
USP39-212ENST00000465514 JPH4Q96JJ6 628 aa17.85■□□□□ 0.45
USP39-212ENST00000465514 BIVM-ERCC5R4GMW8 1640 aa17.83■□□□□ 0.44
USP39-212ENST00000465514 PPRC1Q5VV67 1664 aaKnown RBP17.81■□□□□ 0.44
USP39-212ENST00000465514 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
USP39-212ENST00000465514 GLI2P10070 1586 aa17.69■□□□□ 0.42
USP39-212ENST00000465514 CUL7Q14999 1698 aa17.66■□□□□ 0.42
USP39-212ENST00000465514 COL17A1Q9UMD9 1497 aaPredicted RBP17.65■□□□□ 0.42
USP39-212ENST00000465514 FBXO41Q8TF61 875 aa17.64■□□□□ 0.41
USP39-212ENST00000465514 ASXL2Q76L83 1435 aa17.64■□□□□ 0.41
USP39-212ENST00000465514 ABCC2Q92887 1545 aa17.63■□□□□ 0.41
USP39-212ENST00000465514 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
USP39-212ENST00000465514 MAP3K4Q9Y6R4 1608 aa17.62■□□□□ 0.41
USP39-212ENST00000465514 PLB1Q6P1J6 1458 aa17.61■□□□□ 0.41
USP39-212ENST00000465514 PTPRGP23470 1445 aa17.58■□□□□ 0.41
USP39-212ENST00000465514 TTBK1Q5TCY1 1321 aaPredicted RBP17.56■□□□□ 0.4
USP39-212ENST00000465514 TEX14Q8IWB6 1497 aa17.55■□□□□ 0.4
USP39-212ENST00000465514 EPRSP07814 1512 aaKnown RBP17.52■□□□□ 0.4
USP39-212ENST00000465514 SUPT5HO00267 1087 aaKnown RBP17.52■□□□□ 0.4
USP39-212ENST00000465514 UHRF1BP1LA0JNW5 1464 aa17.5■□□□□ 0.39
USP39-212ENST00000465514 TNIKQ9UKE5 1360 aa17.5■□□□□ 0.39
USP39-212ENST00000465514 KIF21BO75037 1637 aa17.48■□□□□ 0.39
USP39-212ENST00000465514 ZCCHC11Q5TAX3 1644 aaKnown RBP17.48■□□□□ 0.39
USP39-212ENST00000465514 CARMIL2Q6F5E8 1435 aa17.47■□□□□ 0.39
USP39-212ENST00000465514 LMTK3Q96Q04 1460 aa17.44■□□□□ 0.38
USP39-212ENST00000465514 KDM5BQ9UGL1 1544 aa17.44■□□□□ 0.38
USP39-212ENST00000465514 UACAQ9BZF9 1416 aa17.44■□□□□ 0.38
USP39-212ENST00000465514 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
USP39-212ENST00000465514 IGF1RP08069 1367 aa17.41■□□□□ 0.38
USP39-212ENST00000465514 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
USP39-212ENST00000465514 CFAP43Q8NDM7 1665 aa17.37■□□□□ 0.37
USP39-212ENST00000465514 WDR7Q9Y4E6 1490 aa17.36■□□□□ 0.37
USP39-212ENST00000465514 KIF27Q86VH2 1401 aa17.35■□□□□ 0.37
USP39-212ENST00000465514 ADAMTSL3P82987 1691 aa17.33■□□□□ 0.37
USP39-212ENST00000465514 PTPRMP28827 1452 aa17.33■□□□□ 0.37
USP39-212ENST00000465514 MAGI3Q5TCQ9 1506 aa17.32■□□□□ 0.36
USP39-212ENST00000465514 PCF11O94913 1555 aaKnown RBP17.32■□□□□ 0.36
USP39-212ENST00000465514 CD109Q6YHK3 1445 aa17.3■□□□□ 0.36
USP39-212ENST00000465514 KIAA0556O60303 1618 aa17.29■□□□□ 0.36
USP39-212ENST00000465514 CARMIL1Q5VZK9 1371 aa17.28■□□□□ 0.36
USP39-212ENST00000465514 UGGT2Q9NYU1 1516 aa17.26■□□□□ 0.35
USP39-212ENST00000465514 MADDQ8WXG6 1647 aa17.25■□□□□ 0.35
USP39-212ENST00000465514 BCORL1Q5H9F3 1711 aa17.24■□□□□ 0.35
USP39-212ENST00000465514 ILDR2Q71H61 639 aa17.23■□□□□ 0.35
USP39-212ENST00000465514 SOCS7O14512 581 aa17.22■□□□□ 0.35
USP39-212ENST00000465514 ARAP3Q8WWN8 1544 aa17.21■□□□□ 0.35
USP39-212ENST00000465514 DISP3Q9P2K9 1392 aa17.19■□□□□ 0.34
USP39-212ENST00000465514 KCNH8Q96L42 1107 aa17.19■□□□□ 0.34
USP39-212ENST00000465514 RIMS1Q86UR5 1692 aaKnown RBP17.19■□□□□ 0.34
USP39-212ENST00000465514 FOXD1Q16676 465 aa17.16■□□□□ 0.34
USP39-212ENST00000465514 ABCA8O94911 1581 aa17.15■□□□□ 0.34
USP39-212ENST00000465514 CERKQ8TCT0 537 aa17.13■□□□□ 0.33
USP39-212ENST00000465514 FRMPD1Q5SYB0 1578 aa17.12■□□□□ 0.33
USP39-212ENST00000465514 CTTNBP2Q8WZ74 1663 aa17.12■□□□□ 0.33
USP39-212ENST00000465514 SPATA31D1Q6ZQQ2 1576 aa17.11■□□□□ 0.33
USP39-212ENST00000465514 HSPA2P54652 639 aa17.11■□□□□ 0.33
USP39-212ENST00000465514 ABCA9Q8IUA7 1624 aa17.09■□□□□ 0.33
USP39-212ENST00000465514 RAPGEF2Q9Y4G8 1499 aa17.08■□□□□ 0.32
USP39-212ENST00000465514 ARID4BQ4LE39 1312 aaPredicted RBP17.07■□□□□ 0.32
USP39-212ENST00000465514 ARHGEF40Q8TER5 1519 aa17.06■□□□□ 0.32
USP39-212ENST00000465514 RAPGEF3O95398 923 aa17.06■□□□□ 0.32
USP39-212ENST00000465514 PHLDB1Q86UU1 1377 aa17.03■□□□□ 0.32
USP39-212ENST00000465514 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
USP39-212ENST00000465514 NEO1Q92859 1461 aa17.01■□□□□ 0.31
USP39-212ENST00000465514 RICTORQ6R327 1708 aa17■□□□□ 0.31
USP39-212ENST00000465514 PLPPR3Q6T4P5 718 aa17■□□□□ 0.31
USP39-212ENST00000465514 SIGLEC1Q9BZZ2 1709 aa17■□□□□ 0.31
USP39-212ENST00000465514 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
USP39-212ENST00000465514 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
USP39-212ENST00000465514 ATP10BO94823 1461 aa16.96■□□□□ 0.31
USP39-212ENST00000465514 PREX1Q8TCU6 1659 aa16.96■□□□□ 0.31
USP39-212ENST00000465514 TTC37Q6PGP7 1564 aa16.94■□□□□ 0.3
USP39-212ENST00000465514 FANCAO15360 1455 aa16.94■□□□□ 0.3
USP39-212ENST00000465514 STRCQ7RTU9 1775 aa16.94■□□□□ 0.3
USP39-212ENST00000465514 POGZQ7Z3K3 1410 aa16.91■□□□□ 0.3
USP39-212ENST00000465514 DENND4BO75064 1496 aaPredicted RBP16.88■□□□□ 0.29
USP39-212ENST00000465514 ZMYM4Q5VZL5 1548 aa16.88■□□□□ 0.29
USP39-212ENST00000465514 ZFYVE16Q7Z3T8 1539 aa16.88■□□□□ 0.29
USP39-212ENST00000465514 AKNAQ7Z591 1439 aa16.87■□□□□ 0.29
USP39-212ENST00000465514 CFAP74Q9C0B2 1584 aa16.87■□□□□ 0.29
USP39-212ENST00000465514 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
USP39-212ENST00000465514 FHOD3Q2V2M9 1422 aa16.86■□□□□ 0.29
USP39-212ENST00000465514 YEATS2Q9ULM3 1422 aa16.86■□□□□ 0.29
USP39-212ENST00000465514 RAPGEF6Q8TEU7 1601 aa16.85■□□□□ 0.29
USP39-212ENST00000465514 MLECQ14165 292 aa16.82■□□□□ 0.28
USP39-212ENST00000465514 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
USP39-212ENST00000465514 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
USP39-212ENST00000465514 P3H3Q8IVL6 736 aa16.79■□□□□ 0.28
USP39-212ENST00000465514 DMRT2Q9Y5R5 561 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 681.1 ms