RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-225ENST00000465158 ZNF579Q8NAF0 562 aaKnown RBP11.79□□□□□ -0.52
RBM39-225ENST00000465158 DCBLD2Q96PD2 775 aa11.79□□□□□ -0.52
RBM39-225ENST00000465158 CECR2Q9BXF3 1484 aa11.78□□□□□ -0.52
RBM39-225ENST00000465158 RSF1Q96T23 1441 aaPredicted RBP11.76□□□□□ -0.53
RBM39-225ENST00000465158 MROH2BQ7Z745 1585 aa11.74□□□□□ -0.53
RBM39-225ENST00000465158 SUPT5HO00267 1087 aaKnown RBP11.73□□□□□ -0.53
RBM39-225ENST00000465158 EIF4G1Q04637 1599 aaKnown RBP11.73□□□□□ -0.53
RBM39-225ENST00000465158 SMARCA2P51531 1590 aa11.72□□□□□ -0.53
RBM39-225ENST00000465158 PEG3Q9GZU2 1588 aa11.72□□□□□ -0.53
RBM39-225ENST00000465158 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
RBM39-225ENST00000465158 GALR2O43603 387 aaPredicted RBP11.66□□□□□ -0.54
RBM39-225ENST00000465158 WIZO95785 1651 aa11.65□□□□□ -0.54
RBM39-225ENST00000465158 NPM1P06748 294 aaKnown RBP eCLIP11.64□□□□□ -0.55
RBM39-225ENST00000465158 ATAD2BQ9ULI0 1458 aa11.62□□□□□ -0.55
RBM39-225ENST00000465158 NCAPD3P42695 1498 aa11.61□□□□□ -0.55
RBM39-225ENST00000465158 TOP2AP11388 1531 aaKnown RBP11.6□□□□□ -0.55
RBM39-225ENST00000465158 HMGXB3Q12766 1538 aa11.6□□□□□ -0.55
RBM39-225ENST00000465158 PHF12Q96QT6 1004 aa11.59□□□□□ -0.55
RBM39-225ENST00000465158 BAZ1BQ9UIG0 1483 aaKnown RBP11.58□□□□□ -0.56
RBM39-225ENST00000465158 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
RBM39-225ENST00000465158 MNX1P50219 401 aaPredicted RBP11.58□□□□□ -0.56
RBM39-225ENST00000465158 PROM2Q8N271 834 aa11.53□□□□□ -0.56
RBM39-225ENST00000465158 OTUD5Q96G74 571 aa11.46□□□□□ -0.57
RBM39-225ENST00000465158 POTEB2H3BUK9 544 aa11.45□□□□□ -0.58
RBM39-225ENST00000465158 FKBP8Q14318 412 aa11.44□□□□□ -0.58
RBM39-225ENST00000465158 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
RBM39-225ENST00000465158 PELP1Q8IZL8 1130 aaKnown RBP11.43□□□□□ -0.58
RBM39-225ENST00000465158 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
RBM39-225ENST00000465158 ASTLQ6HA08 431 aaPredicted RBP11.41□□□□□ -0.58
RBM39-225ENST00000465158 TSPYL2Q9H2G4 693 aaPredicted RBP11.41□□□□□ -0.58
RBM39-225ENST00000465158 METRNQ9UJH8 293 aa11.38□□□□□ -0.59
RBM39-225ENST00000465158 ATMINO43313 823 aaPredicted RBP11.37□□□□□ -0.59
RBM39-225ENST00000465158 PLSCR2Q9NRY7 297 aa11.37□□□□□ -0.59
RBM39-225ENST00000465158 SLC39A7Q92504 469 aa11.36□□□□□ -0.59
RBM39-225ENST00000465158 CCDC61Q9Y6R9 512 aa11.35□□□□□ -0.59
RBM39-225ENST00000465158 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
RBM39-225ENST00000465158 C7P10643 843 aa11.34□□□□□ -0.59
RBM39-225ENST00000465158 PRDM2Q13029 1718 aa11.34□□□□□ -0.59
RBM39-225ENST00000465158 MIER1Q8N108 512 aa11.3□□□□□ -0.6
RBM39-225ENST00000465158 KIF12Q96FN5 646 aa11.29□□□□□ -0.6
RBM39-225ENST00000465158 LAMC3Q9Y6N6 1575 aa11.28□□□□□ -0.6
RBM39-225ENST00000465158 CFTRP13569 1480 aa11.28□□□□□ -0.6
RBM39-225ENST00000465158 ATN1P54259 1190 aaPredicted RBP11.28□□□□□ -0.6
RBM39-225ENST00000465158 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
RBM39-225ENST00000465158 POTEMA6NI47 508 aa11.26□□□□□ -0.61
RBM39-225ENST00000465158 MAMSTRQ6ZN01 415 aa11.26□□□□□ -0.61
RBM39-225ENST00000465158 POTEJP0CG39 1038 aa11.24□□□□□ -0.61
RBM39-225ENST00000465158 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
RBM39-225ENST00000465158 MAP3K13O43283 966 aa11.22□□□□□ -0.61
RBM39-225ENST00000465158 POTEGQ6S5H5 508 aa11.22□□□□□ -0.61
RBM39-225ENST00000465158 BMP2KQ9NSY1 1161 aaPredicted RBP11.22□□□□□ -0.61
RBM39-225ENST00000465158 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
RBM39-225ENST00000465158 PLCD3Q8N3E9 789 aa11.2□□□□□ -0.62
RBM39-225ENST00000465158 PDS5BQ9NTI5 1447 aa11.19□□□□□ -0.62
RBM39-225ENST00000465158 TIE1P35590 1138 aa11.19□□□□□ -0.62
RBM39-225ENST00000465158 SCUBE2Q9NQ36 999 aa11.19□□□□□ -0.62
RBM39-225ENST00000465158 ABCC8Q09428 1581 aa11.15□□□□□ -0.62
RBM39-225ENST00000465158 POTEFA5A3E0 1075 aa11.14□□□□□ -0.63
RBM39-225ENST00000465158 TRIM41Q8WV44 630 aa11.14□□□□□ -0.63
RBM39-225ENST00000465158 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
RBM39-225ENST00000465158 FBXO3Q9UK99 471 aa11.13□□□□□ -0.63
RBM39-225ENST00000465158 FANCD2Q9BXW9 1451 aa11.12□□□□□ -0.63
RBM39-225ENST00000465158 WRNQ14191 1432 aaPredicted RBP eCLIP11.12□□□□□ -0.63
RBM39-225ENST00000465158 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
RBM39-225ENST00000465158 CEP164Q9UPV0 1460 aa11.11□□□□□ -0.63
RBM39-225ENST00000465158 SGIP1Q9BQI5 828 aa11.1□□□□□ -0.63
RBM39-225ENST00000465158 PCDH10Q9P2E7 1040 aa11.1□□□□□ -0.63
RBM39-225ENST00000465158 SEC24BO95487 1268 aa11.09□□□□□ -0.63
RBM39-225ENST00000465158 FAM163AQ96GL9 167 aaPredicted RBP11.09□□□□□ -0.63
RBM39-225ENST00000465158 PCDHB13Q9Y5F0 798 aa11.09□□□□□ -0.63
RBM39-225ENST00000465158 NESP48681 1621 aa11.09□□□□□ -0.63
RBM39-225ENST00000465158 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
RBM39-225ENST00000465158 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
RBM39-225ENST00000465158 NUBP1P53384 320 aa11.07□□□□□ -0.64
RBM39-225ENST00000465158 KIF21AQ7Z4S6 1674 aa11.06□□□□□ -0.64
RBM39-225ENST00000465158 LCE2DQ5TA82 110 aaPredicted RBP11.06□□□□□ -0.64
RBM39-225ENST00000465158 TRIM35Q9UPQ4 493 aa11.06□□□□□ -0.64
RBM39-225ENST00000465158 COLQQ9Y215 455 aaPredicted RBP11.06□□□□□ -0.64
RBM39-225ENST00000465158 DNMBPQ6XZF7 1577 aa11.04□□□□□ -0.64
RBM39-225ENST00000465158 IER5LQ5T953 404 aa11.04□□□□□ -0.64
RBM39-225ENST00000465158 FAM212AQ96EL1 285 aa11.03□□□□□ -0.64
RBM39-225ENST00000465158 ERCC6Q03468 1493 aa11.02□□□□□ -0.65
RBM39-225ENST00000465158 EEA1Q15075 1411 aa11.01□□□□□ -0.65
RBM39-225ENST00000465158 IFNL1Q8IU54 200 aa11.01□□□□□ -0.65
RBM39-225ENST00000465158 SYNJ1O43426 1573 aa11.01□□□□□ -0.65
RBM39-225ENST00000465158 MRC2Q9UBG0 1479 aa11□□□□□ -0.65
RBM39-225ENST00000465158 CUX1P39880 1505 aa10.99□□□□□ -0.65
RBM39-225ENST00000465158 VASPP50552 380 aaPredicted RBP10.99□□□□□ -0.65
RBM39-225ENST00000465158 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
RBM39-225ENST00000465158 TMEM106CQ9BVX2 250 aa10.97□□□□□ -0.65
RBM39-225ENST00000465158 WDR62O43379 1518 aa10.94□□□□□ -0.66
RBM39-225ENST00000465158 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
RBM39-225ENST00000465158 FGD5Q6ZNL6 1462 aa10.93□□□□□ -0.66
RBM39-225ENST00000465158 WDR97A6NE52 1622 aa10.92□□□□□ -0.66
RBM39-225ENST00000465158 PLCG2P16885 1265 aa10.92□□□□□ -0.66
RBM39-225ENST00000465158 THOC2Q8NI27 1593 aaKnown RBP10.91□□□□□ -0.66
RBM39-225ENST00000465158 DCAF8Q5TAQ9 597 aa10.91□□□□□ -0.66
RBM39-225ENST00000465158 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
RBM39-225ENST00000465158 POLA1P09884 1462 aaPredicted RBP10.9□□□□□ -0.66
RBM39-225ENST00000465158 SLAIN1Q8ND83 568 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms