RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
CMTM1-207ENST00000465057 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
CMTM1-207ENST00000465057 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
CMTM1-207ENST00000465057 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-207ENST00000465057 SHROOM4Q9ULL8 1493 aa11.09□□□□□ -0.63
CMTM1-207ENST00000465057 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
CMTM1-207ENST00000465057 CC2D2AQ9P2K1 1620 aa11.07□□□□□ -0.64
CMTM1-207ENST00000465057 GABBR2O75899 941 aa11.07□□□□□ -0.64
CMTM1-207ENST00000465057 CLCN6P51797 869 aa11.06□□□□□ -0.64
CMTM1-207ENST00000465057 NUBP1P53384 320 aa11.04□□□□□ -0.64
CMTM1-207ENST00000465057 EIF4G1Q04637 1599 aaKnown RBP11.03□□□□□ -0.64
CMTM1-207ENST00000465057 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
CMTM1-207ENST00000465057 TSPYL2Q9H2G4 693 aaPredicted RBP11.03□□□□□ -0.64
CMTM1-207ENST00000465057 KLHL34Q8N239 644 aa11.01□□□□□ -0.65
CMTM1-207ENST00000465057 CCDC61Q9Y6R9 512 aa10.99□□□□□ -0.65
CMTM1-207ENST00000465057 CECR2Q9BXF3 1484 aa10.99□□□□□ -0.65
CMTM1-207ENST00000465057 IFNLR1Q8IU57 520 aaPredicted RBP10.98□□□□□ -0.65
CMTM1-207ENST00000465057 PHF12Q96QT6 1004 aa10.98□□□□□ -0.65
CMTM1-207ENST00000465057 FAM212AQ96EL1 285 aa10.94□□□□□ -0.66
CMTM1-207ENST00000465057 GALR2O43603 387 aaPredicted RBP10.91□□□□□ -0.66
CMTM1-207ENST00000465057 DCAF8Q5TAQ9 597 aa10.9□□□□□ -0.66
CMTM1-207ENST00000465057 SPOCK2Q92563 424 aa10.9□□□□□ -0.66
CMTM1-207ENST00000465057 KIF12Q96FN5 646 aa10.89□□□□□ -0.67
CMTM1-207ENST00000465057 MS4A3Q96HJ5 214 aa10.86□□□□□ -0.67
CMTM1-207ENST00000465057 GSE1Q14687 1217 aa10.85□□□□□ -0.67
CMTM1-207ENST00000465057 MAP3K13O43283 966 aa10.84□□□□□ -0.67
CMTM1-207ENST00000465057 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
CMTM1-207ENST00000465057 DCBLD2Q96PD2 775 aa10.84□□□□□ -0.67
CMTM1-207ENST00000465057 SGIP1Q9BQI5 828 aa10.81□□□□□ -0.68
CMTM1-207ENST00000465057 PYGBP11216 843 aa10.78□□□□□ -0.68
CMTM1-207ENST00000465057 LHX8Q68G74 356 aa10.78□□□□□ -0.68
CMTM1-207ENST00000465057 PCDHB13Q9Y5F0 798 aa10.78□□□□□ -0.68
CMTM1-207ENST00000465057 CIZ1Q9ULV3 898 aaPredicted RBP10.76□□□□□ -0.69
CMTM1-207ENST00000465057 CHRM1P11229 460 aaPredicted RBP10.74□□□□□ -0.69
CMTM1-207ENST00000465057 ASTLQ6HA08 431 aaPredicted RBP10.73□□□□□ -0.69
CMTM1-207ENST00000465057 IFNL1Q8IU54 200 aa10.73□□□□□ -0.69
CMTM1-207ENST00000465057 TRPC6Q9Y210 931 aa10.73□□□□□ -0.69
CMTM1-207ENST00000465057 ATMINO43313 823 aaPredicted RBP10.71□□□□□ -0.69
CMTM1-207ENST00000465057 TIE1P35590 1138 aa10.7□□□□□ -0.7
CMTM1-207ENST00000465057 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
CMTM1-207ENST00000465057 PELP1Q8IZL8 1130 aaKnown RBP10.68□□□□□ -0.7
CMTM1-207ENST00000465057 ATN1P54259 1190 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-207ENST00000465057 TRIM41Q8WV44 630 aa10.66□□□□□ -0.7
CMTM1-207ENST00000465057 PCDHB8Q9UN66 801 aa10.66□□□□□ -0.7
CMTM1-207ENST00000465057 SMARCA4P51532 1647 aa10.66□□□□□ -0.7
CMTM1-207ENST00000465057 ZNF467Q7Z7K2 595 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-207ENST00000465057 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
CMTM1-207ENST00000465057 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
CMTM1-207ENST00000465057 NCAPD3P42695 1498 aa10.61□□□□□ -0.71
CMTM1-207ENST00000465057 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
CMTM1-207ENST00000465057 TMEM106CQ9BVX2 250 aa10.6□□□□□ -0.71
CMTM1-207ENST00000465057 C7P10643 843 aa10.59□□□□□ -0.71
CMTM1-207ENST00000465057 SMARCA2P51531 1590 aa10.59□□□□□ -0.71
CMTM1-207ENST00000465057 HMGXB3Q12766 1538 aa10.58□□□□□ -0.72
CMTM1-207ENST00000465057 METRNQ9UJH8 293 aa10.57□□□□□ -0.72
CMTM1-207ENST00000465057 TRIM35Q9UPQ4 493 aa10.57□□□□□ -0.72
CMTM1-207ENST00000465057 BAZ1AQ9NRL2 1556 aaPredicted RBP10.56□□□□□ -0.72
CMTM1-207ENST00000465057 PSEN1P49768 467 aa10.54□□□□□ -0.72
CMTM1-207ENST00000465057 ERCC6Q03468 1493 aa10.54□□□□□ -0.72
CMTM1-207ENST00000465057 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
CMTM1-207ENST00000465057 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.72
CMTM1-207ENST00000465057 NESP48681 1621 aa10.52□□□□□ -0.73
CMTM1-207ENST00000465057 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.73
CMTM1-207ENST00000465057 PKD2Q13563 968 aa10.51□□□□□ -0.73
CMTM1-207ENST00000465057 IER5LQ5T953 404 aa10.51□□□□□ -0.73
CMTM1-207ENST00000465057 MROH2BQ7Z745 1585 aa10.51□□□□□ -0.73
CMTM1-207ENST00000465057 RNF25Q96BH1 459 aaPredicted RBP10.5□□□□□ -0.73
CMTM1-207ENST00000465057 CUX2O14529 1486 aa10.49□□□□□ -0.73
CMTM1-207ENST00000465057 POTEFA5A3E0 1075 aa10.49□□□□□ -0.73
CMTM1-207ENST00000465057 POTEB2H3BUK9 544 aa10.49□□□□□ -0.73
CMTM1-207ENST00000465057 RIOK3O14730 519 aaKnown RBP10.49□□□□□ -0.73
CMTM1-207ENST00000465057 ECM2O94769 699 aaPredicted RBP10.49□□□□□ -0.73
CMTM1-207ENST00000465057 KIF21AQ7Z4S6 1674 aa10.46□□□□□ -0.74
CMTM1-207ENST00000465057 SEC24BO95487 1268 aa10.45□□□□□ -0.74
CMTM1-207ENST00000465057 COLQQ9Y215 455 aaPredicted RBP10.45□□□□□ -0.74
CMTM1-207ENST00000465057 THOC2Q8NI27 1593 aaKnown RBP10.44□□□□□ -0.74
CMTM1-207ENST00000465057 WIZO95785 1651 aa10.44□□□□□ -0.74
CMTM1-207ENST00000465057 VGFO15240 615 aaPredicted RBP10.43□□□□□ -0.74
CMTM1-207ENST00000465057 IRX5P78411 483 aaPredicted RBP10.43□□□□□ -0.74
CMTM1-207ENST00000465057 GOLGA2Q08379 1002 aa10.43□□□□□ -0.74
CMTM1-207ENST00000465057 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
CMTM1-207ENST00000465057 LAMC3Q9Y6N6 1575 aa10.43□□□□□ -0.74
CMTM1-207ENST00000465057 MKRN3Q13064 507 aaKnown RBP10.42□□□□□ -0.74
CMTM1-207ENST00000465057 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-207ENST00000465057 RGL2O15211 777 aa10.4□□□□□ -0.74
CMTM1-207ENST00000465057 POTEJP0CG39 1038 aa10.4□□□□□ -0.74
CMTM1-207ENST00000465057 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-207ENST00000465057 CABP2Q9NPB3 220 aa10.4□□□□□ -0.74
CMTM1-207ENST00000465057 TAOK2Q9UL54 1235 aa10.4□□□□□ -0.74
CMTM1-207ENST00000465057 PLCG2P16885 1265 aa10.39□□□□□ -0.75
CMTM1-207ENST00000465057 OCEL1Q9H607 264 aa10.39□□□□□ -0.75
CMTM1-207ENST00000465057 OTUD5Q96G74 571 aa10.37□□□□□ -0.75
CMTM1-207ENST00000465057 MAMSTRQ6ZN01 415 aa10.34□□□□□ -0.75
CMTM1-207ENST00000465057 ILDR1Q86SU0 546 aaPredicted RBP10.33□□□□□ -0.76
CMTM1-207ENST00000465057 PDCD7Q8N8D1 485 aaKnown RBP10.33□□□□□ -0.76
CMTM1-207ENST00000465057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.33□□□□□ -0.76
CMTM1-207ENST00000465057 EFCAB3Q8N7B9 438 aa10.32□□□□□ -0.76
CMTM1-207ENST00000465057 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
CMTM1-207ENST00000465057 BCL11BQ9C0K0 894 aaPredicted RBP10.31□□□□□ -0.76
CMTM1-207ENST00000465057 PDS5BQ9NTI5 1447 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms