RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 FAM69CQ0P6D2 419 aa29.7■■■□□ 2.35
COPS6-205ENST00000465027 ABCC10Q5T3U5 1492 aa29.65■■■□□ 2.34
COPS6-205ENST00000465027 RUSC2Q8N2Y8 1516 aa29.64■■■□□ 2.34
COPS6-205ENST00000465027 DIP2BQ9P265 1576 aa29.58■■■□□ 2.33
COPS6-205ENST00000465027 ADCY10Q96PN6 1610 aa29.57■■■□□ 2.32
COPS6-205ENST00000465027 NPM1P06748 294 aaKnown RBP eCLIP29.56■■■□□ 2.32
COPS6-205ENST00000465027 MAPKBP1O60336 1514 aa29.55■■■□□ 2.32
COPS6-205ENST00000465027 KDM4FA0A1W2PPD8 638 aa29.49■■■□□ 2.31
COPS6-205ENST00000465027 KDM6BO15054 1643 aa29.46■■■□□ 2.31
COPS6-205ENST00000465027 TSPOAP1O95153 1857 aa29.44■■■□□ 2.3
COPS6-205ENST00000465027 KIAA0586Q9BVV6 1533 aa29.39■■■□□ 2.3
COPS6-205ENST00000465027 TTBK1Q5TCY1 1321 aaPredicted RBP29.35■■■□□ 2.29
COPS6-205ENST00000465027 IGF1RP08069 1367 aa29.34■■■□□ 2.29
COPS6-205ENST00000465027 PTPRGP23470 1445 aa29.26■■■□□ 2.27
COPS6-205ENST00000465027 CUL7Q14999 1698 aa29.23■■■□□ 2.27
COPS6-205ENST00000465027 KIF27Q86VH2 1401 aa29.22■■■□□ 2.27
COPS6-205ENST00000465027 ILDR1Q86SU0 546 aaPredicted RBP29.19■■■□□ 2.26
COPS6-205ENST00000465027 PPRC1Q5VV67 1664 aaKnown RBP29.17■■■□□ 2.26
COPS6-205ENST00000465027 ABCC2Q92887 1545 aa29.16■■■□□ 2.26
COPS6-205ENST00000465027 ASXL2Q76L83 1435 aa29.16■■■□□ 2.26
COPS6-205ENST00000465027 TNIKQ9UKE5 1360 aa29.13■■■□□ 2.25
COPS6-205ENST00000465027 CARMIL1Q5VZK9 1371 aa29.12■■■□□ 2.25
COPS6-205ENST00000465027 ADGRL1O94910 1474 aa29.1■■■□□ 2.25
COPS6-205ENST00000465027 CARMIL2Q6F5E8 1435 aa29.09■■■□□ 2.25
COPS6-205ENST00000465027 GLI2P10070 1586 aa29.07■■■□□ 2.24
COPS6-205ENST00000465027 PLB1Q6P1J6 1458 aa29.07■■■□□ 2.24
COPS6-205ENST00000465027 COL17A1Q9UMD9 1497 aaPredicted RBP29.07■■■□□ 2.24
COPS6-205ENST00000465027 IQGAP2Q13576 1575 aa29.04■■■□□ 2.24
COPS6-205ENST00000465027 UHRF1BP1LA0JNW5 1464 aa29.01■■■□□ 2.23
COPS6-205ENST00000465027 UACAQ9BZF9 1416 aa29.01■■■□□ 2.23
COPS6-205ENST00000465027 DISP1Q96F81 1524 aa28.99■■■□□ 2.23
COPS6-205ENST00000465027 EPRSP07814 1512 aaKnown RBP28.97■■■□□ 2.23
COPS6-205ENST00000465027 MAP3K4Q9Y6R4 1608 aa28.93■■■□□ 2.22
COPS6-205ENST00000465027 KDM5BQ9UGL1 1544 aa28.91■■■□□ 2.22
COPS6-205ENST00000465027 ZCCHC11Q5TAX3 1644 aaKnown RBP28.9■■■□□ 2.22
COPS6-205ENST00000465027 HECW2Q9P2P5 1572 aa28.88■■■□□ 2.21
COPS6-205ENST00000465027 TEX14Q8IWB6 1497 aa28.83■■■□□ 2.21
COPS6-205ENST00000465027 UGGT2Q9NYU1 1516 aa28.83■■■□□ 2.21
COPS6-205ENST00000465027 KIAA0556O60303 1618 aa28.8■■■□□ 2.2
COPS6-205ENST00000465027 RAPGEF2Q9Y4G8 1499 aa28.76■■■□□ 2.19
COPS6-205ENST00000465027 WDR7Q9Y4E6 1490 aa28.75■■■□□ 2.19
COPS6-205ENST00000465027 KCNH8Q96L42 1107 aa28.67■■■□□ 2.18
COPS6-205ENST00000465027 CD109Q6YHK3 1445 aa28.65■■■□□ 2.18
COPS6-205ENST00000465027 MAGI3Q5TCQ9 1506 aa28.61■■■□□ 2.17
COPS6-205ENST00000465027 ABCA8O94911 1581 aa28.58■■■□□ 2.17
COPS6-205ENST00000465027 CFAP43Q8NDM7 1665 aa28.58■■■□□ 2.17
COPS6-205ENST00000465027 KIF21BO75037 1637 aa28.58■■■□□ 2.17
COPS6-205ENST00000465027 CTTNBP2Q8WZ74 1663 aa28.56■■■□□ 2.16
COPS6-205ENST00000465027 ARID3CA6NKF2 412 aa28.52■■■□□ 2.16
COPS6-205ENST00000465027 GOLGA3Q08378 1498 aa28.49■■■□□ 2.15
COPS6-205ENST00000465027 ARAP3Q8WWN8 1544 aa28.4■■■□□ 2.14
COPS6-205ENST00000465027 P3H3Q8IVL6 736 aa28.39■■■□□ 2.14
COPS6-205ENST00000465027 ATP10BO94823 1461 aa28.36■■■□□ 2.13
COPS6-205ENST00000465027 FBXO41Q8TF61 875 aa28.36■■■□□ 2.13
COPS6-205ENST00000465027 PTPRMP28827 1452 aa28.34■■■□□ 2.13
COPS6-205ENST00000465027 PRXQ9BXM0 1461 aa28.34■■■□□ 2.13
COPS6-205ENST00000465027 RAPGEF3O95398 923 aa28.33■■■□□ 2.13
COPS6-205ENST00000465027 ADAMTSL3P82987 1691 aa28.32■■■□□ 2.12
COPS6-205ENST00000465027 ABCA9Q8IUA7 1624 aa28.29■■■□□ 2.12
COPS6-205ENST00000465027 FRMPD1Q5SYB0 1578 aa28.23■■■□□ 2.11
COPS6-205ENST00000465027 MADDQ8WXG6 1647 aa28.21■■■□□ 2.11
COPS6-205ENST00000465027 PHLDB1Q86UU1 1377 aa28.2■■■□□ 2.1
COPS6-205ENST00000465027 BCORL1Q5H9F3 1711 aa28.2■■■□□ 2.1
COPS6-205ENST00000465027 ARID4BQ4LE39 1312 aaPredicted RBP28.19■■■□□ 2.1
COPS6-205ENST00000465027 NEO1Q92859 1461 aa28.17■■■□□ 2.1
COPS6-205ENST00000465027 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.17■■■□□ 2.1
COPS6-205ENST00000465027 HNRNPUL2Q1KMD3 747 aaKnown RBP28.17■■■□□ 2.1
COPS6-205ENST00000465027 PCF11O94913 1555 aaKnown RBP28.16■■■□□ 2.1
COPS6-205ENST00000465027 RAPGEF6Q8TEU7 1601 aa28.15■■■□□ 2.1
COPS6-205ENST00000465027 LMTK3Q96Q04 1460 aa28.15■■■□□ 2.1
COPS6-205ENST00000465027 FAM9AQ8IZU1 332 aaPredicted RBP28.14■■■□□ 2.1
COPS6-205ENST00000465027 SAMD9Q5K651 1589 aa28.13■■■□□ 2.09
COPS6-205ENST00000465027 RIMS1Q86UR5 1692 aaKnown RBP28.1■■■□□ 2.09
COPS6-205ENST00000465027 PLPPR3Q6T4P5 718 aa28.09■■■□□ 2.09
COPS6-205ENST00000465027 NUP153P49790 1475 aaKnown RBP28.08■■■□□ 2.09
COPS6-205ENST00000465027 RANGAP1P46060 587 aaPredicted RBP28.08■■■□□ 2.09
COPS6-205ENST00000465027 HSPA2P54652 639 aa28.07■■■□□ 2.08
COPS6-205ENST00000465027 ARHGEF40Q8TER5 1519 aa28.06■■■□□ 2.08
COPS6-205ENST00000465027 DENND4BO75064 1496 aaPredicted RBP28.02■■■□□ 2.08
COPS6-205ENST00000465027 RICTORQ6R327 1708 aa28.01■■■□□ 2.07
COPS6-205ENST00000465027 FHOD3Q2V2M9 1422 aa28.01■■■□□ 2.07
COPS6-205ENST00000465027 AKNAQ7Z591 1439 aa27.99■■■□□ 2.07
COPS6-205ENST00000465027 SIGLEC1Q9BZZ2 1709 aa27.98■■■□□ 2.07
COPS6-205ENST00000465027 CSRNP3Q8WYN3 585 aa27.98■■■□□ 2.07
COPS6-205ENST00000465027 FANCAO15360 1455 aa27.95■■■□□ 2.06
COPS6-205ENST00000465027 YEATS2Q9ULM3 1422 aa27.94■■■□□ 2.06
COPS6-205ENST00000465027 PLEKHD1A6NEE1 506 aa27.93■■■□□ 2.06
COPS6-205ENST00000465027 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.92■■■□□ 2.061e-9■■■□□ 15.8
COPS6-205ENST00000465027 MLECQ14165 292 aa27.92■■■□□ 2.06
COPS6-205ENST00000465027 TTC37Q6PGP7 1564 aa27.91■■■□□ 2.06
COPS6-205ENST00000465027 ZFYVE16Q7Z3T8 1539 aa27.88■■■□□ 2.05
COPS6-205ENST00000465027 ZMYM4Q5VZL5 1548 aa27.87■■■□□ 2.05
COPS6-205ENST00000465027 CFAP74Q9C0B2 1584 aa27.86■■■□□ 2.05
COPS6-205ENST00000465027 POGZQ7Z3K3 1410 aa27.85■■■□□ 2.05
COPS6-205ENST00000465027 CERKQ8TCT0 537 aa27.84■■■□□ 2.05
COPS6-205ENST00000465027 HECW1Q76N89 1606 aa27.83■■■□□ 2.05
COPS6-205ENST00000465027 EFCAB5A4FU69 1503 aa27.82■■■□□ 2.04
COPS6-205ENST00000465027 CDK13Q14004 1512 aaKnown RBP27.81■■■□□ 2.04
COPS6-205ENST00000465027 FER1L4A9Z1Z3 1794 aa27.8■■■□□ 2.04
COPS6-205ENST00000465027 SCAPERQ9BY12 1400 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms