RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 HECW2Q9P2P5 1572 aa21.7■■□□□ 1.06
SCAF8-205ENST00000464628 FAM69CQ0P6D2 419 aa21.69■■□□□ 1.06
SCAF8-205ENST00000464628 ADCY10Q96PN6 1610 aa21.66■■□□□ 1.06
SCAF8-205ENST00000464628 ADGRL1O94910 1474 aa21.62■■□□□ 1.05
SCAF8-205ENST00000464628 PRG4Q92954 1404 aaPredicted RBP21.62■■□□□ 1.05
SCAF8-205ENST00000464628 FHAD1B1AJZ9 1412 aa21.56■■□□□ 1.04
SCAF8-205ENST00000464628 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
SCAF8-205ENST00000464628 PPRC1Q5VV67 1664 aaKnown RBP21.55■■□□□ 1.04
SCAF8-205ENST00000464628 ERICH3Q5RHP9 1530 aa21.49■■□□□ 1.03
SCAF8-205ENST00000464628 NPM1P06748 294 aaKnown RBP eCLIP21.45■■□□□ 1.02
SCAF8-205ENST00000464628 JPH4Q96JJ6 628 aa21.44■■□□□ 1.02
SCAF8-205ENST00000464628 BIVM-ERCC5R4GMW8 1640 aa21.41■■□□□ 1.02
SCAF8-205ENST00000464628 WRNQ14191 1432 aaPredicted RBP eCLIP21.39■■□□□ 1.02
SCAF8-205ENST00000464628 FBXO41Q8TF61 875 aa21.38■■□□□ 1.01
SCAF8-205ENST00000464628 GLI2P10070 1586 aa21.36■■□□□ 1.01
SCAF8-205ENST00000464628 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
SCAF8-205ENST00000464628 COL17A1Q9UMD9 1497 aaPredicted RBP21.33■■□□□ 1.01
SCAF8-205ENST00000464628 MAP3K4Q9Y6R4 1608 aa21.27■■□□□ 1
SCAF8-205ENST00000464628 CUL7Q14999 1698 aa21.25■□□□□ 0.99
SCAF8-205ENST00000464628 ABCC2Q92887 1545 aa21.22■□□□□ 0.99
SCAF8-205ENST00000464628 ASXL2Q76L83 1435 aa21.21■□□□□ 0.99
SCAF8-205ENST00000464628 PLB1Q6P1J6 1458 aa21.19■□□□□ 0.98
SCAF8-205ENST00000464628 KIAA0586Q9BVV6 1533 aa21.19■□□□□ 0.98
SCAF8-205ENST00000464628 LMTK3Q96Q04 1460 aa21.14■□□□□ 0.98
SCAF8-205ENST00000464628 EPRSP07814 1512 aaKnown RBP21.12■□□□□ 0.97
SCAF8-205ENST00000464628 TEX14Q8IWB6 1497 aa21.12■□□□□ 0.97
SCAF8-205ENST00000464628 PTPRGP23470 1445 aa21.1■□□□□ 0.97
SCAF8-205ENST00000464628 KIF21BO75037 1637 aa21.09■□□□□ 0.97
SCAF8-205ENST00000464628 UHRF1BP1LA0JNW5 1464 aa21.08■□□□□ 0.97
SCAF8-205ENST00000464628 ZCCHC11Q5TAX3 1644 aaKnown RBP21.04■□□□□ 0.96
SCAF8-205ENST00000464628 KDM5BQ9UGL1 1544 aa21.01■□□□□ 0.95
SCAF8-205ENST00000464628 TNIKQ9UKE5 1360 aa21■□□□□ 0.95
SCAF8-205ENST00000464628 ADAMTSL3P82987 1691 aa20.97■□□□□ 0.95
SCAF8-205ENST00000464628 UACAQ9BZF9 1416 aa20.95■□□□□ 0.95
SCAF8-205ENST00000464628 CFAP43Q8NDM7 1665 aa20.94■□□□□ 0.94
SCAF8-205ENST00000464628 TTBK1Q5TCY1 1321 aaPredicted RBP20.94■□□□□ 0.94
SCAF8-205ENST00000464628 CARMIL2Q6F5E8 1435 aa20.93■□□□□ 0.94
SCAF8-205ENST00000464628 PTPRMP28827 1452 aa20.93■□□□□ 0.94
SCAF8-205ENST00000464628 PCF11O94913 1555 aaKnown RBP20.93■□□□□ 0.94
SCAF8-205ENST00000464628 ILDR2Q71H61 639 aa20.92■□□□□ 0.94
SCAF8-205ENST00000464628 SOCS7O14512 581 aa20.91■□□□□ 0.94
SCAF8-205ENST00000464628 IQGAP2Q13576 1575 aa20.91■□□□□ 0.94
SCAF8-205ENST00000464628 MAGI3Q5TCQ9 1506 aa20.89■□□□□ 0.94
SCAF8-205ENST00000464628 DISP1Q96F81 1524 aa20.88■□□□□ 0.93
SCAF8-205ENST00000464628 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
SCAF8-205ENST00000464628 IGF1RP08069 1367 aa20.87■□□□□ 0.93
SCAF8-205ENST00000464628 BCORL1Q5H9F3 1711 aa20.82■□□□□ 0.92
SCAF8-205ENST00000464628 MADDQ8WXG6 1647 aa20.82■□□□□ 0.92
SCAF8-205ENST00000464628 DISP3Q9P2K9 1392 aa20.79■□□□□ 0.92
SCAF8-205ENST00000464628 CD109Q6YHK3 1445 aa20.78■□□□□ 0.92
SCAF8-205ENST00000464628 KIAA0556O60303 1618 aa20.78■□□□□ 0.92
SCAF8-205ENST00000464628 ARAP3Q8WWN8 1544 aa20.76■□□□□ 0.91
SCAF8-205ENST00000464628 KIF27Q86VH2 1401 aa20.76■□□□□ 0.91
SCAF8-205ENST00000464628 SPATA31D1Q6ZQQ2 1576 aa20.75■□□□□ 0.91
SCAF8-205ENST00000464628 UGGT2Q9NYU1 1516 aa20.74■□□□□ 0.91
SCAF8-205ENST00000464628 RIMS1Q86UR5 1692 aaKnown RBP20.71■□□□□ 0.91
SCAF8-205ENST00000464628 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
SCAF8-205ENST00000464628 CERKQ8TCT0 537 aa20.69■□□□□ 0.9
SCAF8-205ENST00000464628 FRMPD1Q5SYB0 1578 aa20.65■□□□□ 0.9
SCAF8-205ENST00000464628 ABCA8O94911 1581 aa20.63■□□□□ 0.89
SCAF8-205ENST00000464628 HSPA2P54652 639 aa20.59■□□□□ 0.89
SCAF8-205ENST00000464628 ABCA9Q8IUA7 1624 aa20.58■□□□□ 0.89
SCAF8-205ENST00000464628 ARHGEF40Q8TER5 1519 aa20.57■□□□□ 0.88
SCAF8-205ENST00000464628 KCNH8Q96L42 1107 aa20.56■□□□□ 0.88
SCAF8-205ENST00000464628 SIGLEC1Q9BZZ2 1709 aa20.54■□□□□ 0.88
SCAF8-205ENST00000464628 CTTNBP2Q8WZ74 1663 aa20.53■□□□□ 0.88
SCAF8-205ENST00000464628 PHLDB1Q86UU1 1377 aa20.5■□□□□ 0.87
SCAF8-205ENST00000464628 RICTORQ6R327 1708 aa20.48■□□□□ 0.87
SCAF8-205ENST00000464628 SUPT5HO00267 1087 aaKnown RBP20.48■□□□□ 0.87
SCAF8-205ENST00000464628 RAPGEF3O95398 923 aa20.48■□□□□ 0.87
SCAF8-205ENST00000464628 STRCQ7RTU9 1775 aa20.48■□□□□ 0.87
SCAF8-205ENST00000464628 NEO1Q92859 1461 aa20.48■□□□□ 0.87
SCAF8-205ENST00000464628 FER1L4A9Z1Z3 1794 aa20.46■□□□□ 0.87
SCAF8-205ENST00000464628 PREX1Q8TCU6 1659 aa20.46■□□□□ 0.87
SCAF8-205ENST00000464628 TTC37Q6PGP7 1564 aa20.46■□□□□ 0.87
SCAF8-205ENST00000464628 RAPGEF2Q9Y4G8 1499 aa20.44■□□□□ 0.86
SCAF8-205ENST00000464628 ARID4BQ4LE39 1312 aaPredicted RBP20.44■□□□□ 0.86
SCAF8-205ENST00000464628 GOLGA3Q08378 1498 aa20.38■□□□□ 0.85
SCAF8-205ENST00000464628 FANCAO15360 1455 aa20.37■□□□□ 0.85
SCAF8-205ENST00000464628 ATP10BO94823 1461 aa20.37■□□□□ 0.85
SCAF8-205ENST00000464628 ZMYM4Q5VZL5 1548 aa20.36■□□□□ 0.85
SCAF8-205ENST00000464628 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
SCAF8-205ENST00000464628 YEATS2Q9ULM3 1422 aa20.33■□□□□ 0.84
SCAF8-205ENST00000464628 POGZQ7Z3K3 1410 aa20.32■□□□□ 0.84
SCAF8-205ENST00000464628 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
SCAF8-205ENST00000464628 FHOD3Q2V2M9 1422 aa20.29■□□□□ 0.84
SCAF8-205ENST00000464628 ZFYVE16Q7Z3T8 1539 aa20.29■□□□□ 0.84
SCAF8-205ENST00000464628 DENND4BO75064 1496 aaPredicted RBP20.29■□□□□ 0.84
SCAF8-205ENST00000464628 AKNAQ7Z591 1439 aa20.28■□□□□ 0.84
SCAF8-205ENST00000464628 EFCAB5A4FU69 1503 aa20.28■□□□□ 0.84
SCAF8-205ENST00000464628 ARHGEF12Q9NZN5 1544 aa20.28■□□□□ 0.84
SCAF8-205ENST00000464628 IQSEC2Q5JU85 1478 aa20.28■□□□□ 0.84
SCAF8-205ENST00000464628 CFAP74Q9C0B2 1584 aa20.27■□□□□ 0.84
SCAF8-205ENST00000464628 ARID3CA6NKF2 412 aa20.24■□□□□ 0.83
SCAF8-205ENST00000464628 RAPGEF6Q8TEU7 1601 aa20.22■□□□□ 0.83
SCAF8-205ENST00000464628 PTPRTO14522 1441 aa20.21■□□□□ 0.83
SCAF8-205ENST00000464628 HECW1Q76N89 1606 aa20.21■□□□□ 0.83
SCAF8-205ENST00000464628 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
SCAF8-205ENST00000464628 MAGI2Q86UL8 1455 aa20.19■□□□□ 0.82
SCAF8-205ENST00000464628 MLECQ14165 292 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms