RNA–Protein interactions for RNA: ENST00000464518.1

SLC13A3-208, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5

Gene SLC13A3, Length 792 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-208ENST00000464518 ERCC6L2Q5T890 1561 aa23.07■■□□□ 1.28
SLC13A3-208ENST00000464518 FHAD1B1AJZ9 1412 aa23.03■■□□□ 1.28
SLC13A3-208ENST00000464518 ERICH3Q5RHP9 1530 aa23.01■■□□□ 1.27
SLC13A3-208ENST00000464518 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
SLC13A3-208ENST00000464518 TOP2BQ02880 1626 aa22.99■■□□□ 1.27
SLC13A3-208ENST00000464518 KIF13AQ9H1H9 1805 aa22.94■■□□□ 1.26
SLC13A3-208ENST00000464518 PRG4Q92954 1404 aaPredicted RBP22.86■■□□□ 1.25
SLC13A3-208ENST00000464518 POTEDQ86YR6 584 aa22.85■■□□□ 1.25
SLC13A3-208ENST00000464518 MAPKBP1O60336 1514 aa22.83■■□□□ 1.25
SLC13A3-208ENST00000464518 ABCC10Q5T3U5 1492 aa22.83■■□□□ 1.25
SLC13A3-208ENST00000464518 JPH4Q96JJ6 628 aa22.81■■□□□ 1.24
SLC13A3-208ENST00000464518 RUSC2Q8N2Y8 1516 aa22.81■■□□□ 1.24
SLC13A3-208ENST00000464518 NPM1P06748 294 aaKnown RBP eCLIP22.74■■□□□ 1.23
SLC13A3-208ENST00000464518 DIP2BQ9P265 1576 aa22.74■■□□□ 1.23
SLC13A3-208ENST00000464518 FAM69CQ0P6D2 419 aa22.71■■□□□ 1.23
SLC13A3-208ENST00000464518 ADCY10Q96PN6 1610 aa22.69■■□□□ 1.22
SLC13A3-208ENST00000464518 SUPT5HO00267 1087 aaKnown RBP22.66■■□□□ 1.22
SLC13A3-208ENST00000464518 KIAA0586Q9BVV6 1533 aa22.65■■□□□ 1.22
SLC13A3-208ENST00000464518 KDM6BO15054 1643 aa22.64■■□□□ 1.22
SLC13A3-208ENST00000464518 CUL7Q14999 1698 aa22.59■■□□□ 1.21
SLC13A3-208ENST00000464518 KDM4FA0A1W2PPD8 638 aa22.52■■□□□ 1.2
SLC13A3-208ENST00000464518 IGF1RP08069 1367 aa22.5■■□□□ 1.19
SLC13A3-208ENST00000464518 KIF27Q86VH2 1401 aa22.5■■□□□ 1.19
SLC13A3-208ENST00000464518 TSPOAP1O95153 1857 aa22.47■■□□□ 1.19
SLC13A3-208ENST00000464518 PTPRGP23470 1445 aa22.46■■□□□ 1.19
SLC13A3-208ENST00000464518 ABCC2Q92887 1545 aa22.46■■□□□ 1.19
SLC13A3-208ENST00000464518 GLI2P10070 1586 aa22.46■■□□□ 1.19
SLC13A3-208ENST00000464518 CARMIL2Q6F5E8 1435 aa22.44■■□□□ 1.18
SLC13A3-208ENST00000464518 PLB1Q6P1J6 1458 aa22.43■■□□□ 1.18
SLC13A3-208ENST00000464518 TNIKQ9UKE5 1360 aa22.42■■□□□ 1.18
SLC13A3-208ENST00000464518 UHRF1BP1LA0JNW5 1464 aa22.41■■□□□ 1.18
SLC13A3-208ENST00000464518 PPRC1Q5VV67 1664 aaKnown RBP22.37■■□□□ 1.17
SLC13A3-208ENST00000464518 ASXL2Q76L83 1435 aa22.37■■□□□ 1.17
SLC13A3-208ENST00000464518 IQGAP2Q13576 1575 aa22.36■■□□□ 1.17
SLC13A3-208ENST00000464518 CARMIL1Q5VZK9 1371 aa22.36■■□□□ 1.17
SLC13A3-208ENST00000464518 UACAQ9BZF9 1416 aa22.31■■□□□ 1.16
SLC13A3-208ENST00000464518 ADGRL1O94910 1474 aa22.29■■□□□ 1.16
SLC13A3-208ENST00000464518 TEX14Q8IWB6 1497 aa22.29■■□□□ 1.16
SLC13A3-208ENST00000464518 MAP3K4Q9Y6R4 1608 aa22.29■■□□□ 1.16
SLC13A3-208ENST00000464518 KDM5BQ9UGL1 1544 aa22.29■■□□□ 1.16
SLC13A3-208ENST00000464518 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
SLC13A3-208ENST00000464518 DISP1Q96F81 1524 aa22.26■■□□□ 1.15
SLC13A3-208ENST00000464518 ILDR1Q86SU0 546 aaPredicted RBP22.24■■□□□ 1.15
SLC13A3-208ENST00000464518 UGGT2Q9NYU1 1516 aa22.22■■□□□ 1.15
SLC13A3-208ENST00000464518 COL17A1Q9UMD9 1497 aaPredicted RBP22.2■■□□□ 1.14
SLC13A3-208ENST00000464518 ZCCHC11Q5TAX3 1644 aaKnown RBP22.18■■□□□ 1.14
SLC13A3-208ENST00000464518 TTBK1Q5TCY1 1321 aaPredicted RBP22.17■■□□□ 1.14
SLC13A3-208ENST00000464518 KIAA0556O60303 1618 aa22.16■■□□□ 1.14
SLC13A3-208ENST00000464518 RAPGEF2Q9Y4G8 1499 aa22.14■■□□□ 1.13
SLC13A3-208ENST00000464518 HECW2Q9P2P5 1572 aa22.13■■□□□ 1.13
SLC13A3-208ENST00000464518 WDR7Q9Y4E6 1490 aa22.13■■□□□ 1.13
SLC13A3-208ENST00000464518 MAGI3Q5TCQ9 1506 aa22.08■■□□□ 1.13
SLC13A3-208ENST00000464518 CFAP43Q8NDM7 1665 aa22.07■■□□□ 1.12
SLC13A3-208ENST00000464518 GOLGA3Q08378 1498 aa22.02■■□□□ 1.12
SLC13A3-208ENST00000464518 CD109Q6YHK3 1445 aa22■■□□□ 1.11
SLC13A3-208ENST00000464518 CTTNBP2Q8WZ74 1663 aa22■■□□□ 1.11
SLC13A3-208ENST00000464518 ABCA8O94911 1581 aa21.98■■□□□ 1.11
SLC13A3-208ENST00000464518 ARAP3Q8WWN8 1544 aa21.92■■□□□ 1.1
SLC13A3-208ENST00000464518 PHLDB1Q86UU1 1377 aa21.88■■□□□ 1.09
SLC13A3-208ENST00000464518 KIF21BO75037 1637 aa21.87■■□□□ 1.09
SLC13A3-208ENST00000464518 FAM9AQ8IZU1 332 aaPredicted RBP21.82■■□□□ 1.08
SLC13A3-208ENST00000464518 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
SLC13A3-208ENST00000464518 PRXQ9BXM0 1461 aa21.81■■□□□ 1.08
SLC13A3-208ENST00000464518 ABCA9Q8IUA7 1624 aa21.8■■□□□ 1.08
SLC13A3-208ENST00000464518 FBXO41Q8TF61 875 aa21.8■■□□□ 1.08
SLC13A3-208ENST00000464518 ADAMTSL3P82987 1691 aa21.79■■□□□ 1.08
SLC13A3-208ENST00000464518 NEO1Q92859 1461 aa21.77■■□□□ 1.07
SLC13A3-208ENST00000464518 PTPRMP28827 1452 aa21.76■■□□□ 1.07
SLC13A3-208ENST00000464518 ATP10BO94823 1461 aa21.75■■□□□ 1.07
SLC13A3-208ENST00000464518 BCORL1Q5H9F3 1711 aa21.69■■□□□ 1.06
SLC13A3-208ENST00000464518 PCF11O94913 1555 aaKnown RBP21.66■■□□□ 1.06
SLC13A3-208ENST00000464518 SAMD9Q5K651 1589 aa21.66■■□□□ 1.06
SLC13A3-208ENST00000464518 RAPGEF6Q8TEU7 1601 aa21.66■■□□□ 1.06
SLC13A3-208ENST00000464518 FRMPD1Q5SYB0 1578 aa21.65■■□□□ 1.06
SLC13A3-208ENST00000464518 MADDQ8WXG6 1647 aa21.62■■□□□ 1.05
SLC13A3-208ENST00000464518 ARHGEF40Q8TER5 1519 aa21.61■■□□□ 1.05
SLC13A3-208ENST00000464518 LMTK3Q96Q04 1460 aa21.61■■□□□ 1.05
SLC13A3-208ENST00000464518 RAPGEF3O95398 923 aa21.61■■□□□ 1.05
SLC13A3-208ENST00000464518 CFAP74Q9C0B2 1584 aa21.58■■□□□ 1.05
SLC13A3-208ENST00000464518 RICTORQ6R327 1708 aa21.55■■□□□ 1.04
SLC13A3-208ENST00000464518 DENND4BO75064 1496 aaPredicted RBP21.55■■□□□ 1.04
SLC13A3-208ENST00000464518 NUP153P49790 1475 aaKnown RBP21.55■■□□□ 1.04
SLC13A3-208ENST00000464518 FHOD3Q2V2M9 1422 aa21.55■■□□□ 1.04
SLC13A3-208ENST00000464518 ARID3CA6NKF2 412 aa21.54■■□□□ 1.04
SLC13A3-208ENST00000464518 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
SLC13A3-208ENST00000464518 P3H3Q8IVL6 736 aa21.53■■□□□ 1.04
SLC13A3-208ENST00000464518 ZMYM4Q5VZL5 1548 aa21.53■■□□□ 1.04
SLC13A3-208ENST00000464518 POGZQ7Z3K3 1410 aa21.52■■□□□ 1.04
SLC13A3-208ENST00000464518 FANCAO15360 1455 aa21.52■■□□□ 1.03
SLC13A3-208ENST00000464518 RIMS1Q86UR5 1692 aaKnown RBP21.51■■□□□ 1.03
SLC13A3-208ENST00000464518 MAGI2Q86UL8 1455 aa21.5■■□□□ 1.03
SLC13A3-208ENST00000464518 EFCAB5A4FU69 1503 aa21.5■■□□□ 1.03
SLC13A3-208ENST00000464518 AKNAQ7Z591 1439 aa21.49■■□□□ 1.03
SLC13A3-208ENST00000464518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.49■■□□□ 1.03
SLC13A3-208ENST00000464518 HNRNPUL2Q1KMD3 747 aaKnown RBP21.49■■□□□ 1.03
SLC13A3-208ENST00000464518 PLEKHD1A6NEE1 506 aa21.46■■□□□ 1.03
SLC13A3-208ENST00000464518 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
SLC13A3-208ENST00000464518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.45■■□□□ 1.02
SLC13A3-208ENST00000464518 ZFYVE16Q7Z3T8 1539 aa21.44■■□□□ 1.02
SLC13A3-208ENST00000464518 EEA1Q15075 1411 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms