RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 CEP164Q9UPV0 1460 aa5.35□□□□□ -1.55
CCNL1-204ENST00000464316 VPS8Q8N3P4 1428 aa5.35□□□□□ -1.55
CCNL1-204ENST00000464316 DHX57Q6P158 1386 aaKnown RBP5.35□□□□□ -1.55
CCNL1-204ENST00000464316 CECR2Q9BXF3 1484 aa5.34□□□□□ -1.55
CCNL1-204ENST00000464316 TRIM52Q96A61 297 aa5.34□□□□□ -1.55
CCNL1-204ENST00000464316 PPP4R2Q9NY27 417 aa5.34□□□□□ -1.55
CCNL1-204ENST00000464316 NOP58Q9Y2X3 529 aaKnown RBP5.33□□□□□ -1.56
CCNL1-204ENST00000464316 SOGA1O94964 1423 aa5.33□□□□□ -1.56
CCNL1-204ENST00000464316 RANGAP1P46060 587 aaPredicted RBP5.33□□□□□ -1.56
CCNL1-204ENST00000464316 CCDC88BA6NC98 1476 aa5.32□□□□□ -1.56
CCNL1-204ENST00000464316 ZBTB47Q9UFB7 747 aaPredicted RBP5.32□□□□□ -1.56
CCNL1-204ENST00000464316 MSH5O43196 834 aa5.32□□□□□ -1.56
CCNL1-204ENST00000464316 HNRNPUQ00839 825 aaKnown RBP eCLIP5.31□□□□□ -1.56
CCNL1-204ENST00000464316 DNMBPQ6XZF7 1577 aa5.31□□□□□ -1.56
CCNL1-204ENST00000464316 CLASP1Q7Z460 1538 aa5.31□□□□□ -1.56
CCNL1-204ENST00000464316 CUX2O14529 1486 aa5.3□□□□□ -1.56
CCNL1-204ENST00000464316 NBR1Q14596 966 aa5.3□□□□□ -1.56
CCNL1-204ENST00000464316 KCNH8Q96L42 1107 aa5.3□□□□□ -1.56
CCNL1-204ENST00000464316 USP35Q9P2H5 1018 aa5.27□□□□□ -1.57
CCNL1-204ENST00000464316 CCNB3Q8WWL7 1395 aa5.27□□□□□ -1.57
CCNL1-204ENST00000464316 ABCC8Q09428 1581 aa5.27□□□□□ -1.57
CCNL1-204ENST00000464316 PPP1R15AO75807 674 aaPredicted RBP5.27□□□□□ -1.57
CCNL1-204ENST00000464316 PPM1GO15355 546 aaPredicted RBP5.26□□□□□ -1.57
CCNL1-204ENST00000464316 GLIPR1L2Q4G1C9 344 aa5.26□□□□□ -1.57
CCNL1-204ENST00000464316 IPO9Q96P70 1041 aaKnown RBP5.26□□□□□ -1.57
CCNL1-204ENST00000464316 ANO8Q9HCE9 1232 aaPredicted RBP5.26□□□□□ -1.57
CCNL1-204ENST00000464316 DAXXQ9UER7 740 aaPredicted RBP5.26□□□□□ -1.57
CCNL1-204ENST00000464316 LRRIQ1Q96JM4 1722 aa5.26□□□□□ -1.57
CCNL1-204ENST00000464316 IRX6P78412 446 aaPredicted RBP5.25□□□□□ -1.57
CCNL1-204ENST00000464316 TONSLQ96HA7 1378 aa5.25□□□□□ -1.57
CCNL1-204ENST00000464316 CTTNBP2Q8WZ74 1663 aa5.25□□□□□ -1.57
CCNL1-204ENST00000464316 CCDC136Q96JN2 1154 aa5.25□□□□□ -1.57
CCNL1-204ENST00000464316 CUL7Q14999 1698 aa5.24□□□□□ -1.57
CCNL1-204ENST00000464316 EIF5BO60841 1220 aaKnown RBP5.24□□□□□ -1.57
CCNL1-204ENST00000464316 SETD5Q9C0A6 1442 aa5.24□□□□□ -1.57
CCNL1-204ENST00000464316 RRBP1Q9P2E9 1410 aaKnown RBP5.23□□□□□ -1.57
CCNL1-204ENST00000464316 FAM50AQ14320 339 aaKnown RBP5.23□□□□□ -1.57
CCNL1-204ENST00000464316 BCORL1Q5H9F3 1711 aa5.23□□□□□ -1.57
CCNL1-204ENST00000464316 RUSC2Q8N2Y8 1516 aa5.23□□□□□ -1.57
CCNL1-204ENST00000464316 KIF21BO75037 1637 aa5.23□□□□□ -1.57
CCNL1-204ENST00000464316 UBE2Q2Q8WVN8 375 aa5.23□□□□□ -1.57
CCNL1-204ENST00000464316 RAB3GAP2Q9H2M9 1393 aa5.23□□□□□ -1.57
CCNL1-204ENST00000464316 B4GALNT3Q6L9W6 998 aa5.23□□□□□ -1.57
CCNL1-204ENST00000464316 SAMD9Q5K651 1589 aa5.22□□□□□ -1.57
CCNL1-204ENST00000464316 ERICH3Q5RHP9 1530 aa5.22□□□□□ -1.57
CCNL1-204ENST00000464316 DDRGK1Q96HY6 314 aa5.22□□□□□ -1.57
CCNL1-204ENST00000464316 NEFMP07197 916 aa5.21□□□□□ -1.57
CCNL1-204ENST00000464316 ADAMTS12P58397 1594 aa5.21□□□□□ -1.57
CCNL1-204ENST00000464316 KANK4Q5T7N3 995 aaPredicted RBP5.21□□□□□ -1.57
CCNL1-204ENST00000464316 SIN3AQ96ST3 1273 aa5.21□□□□□ -1.57
CCNL1-204ENST00000464316 SALL2Q9Y467 1007 aaPredicted RBP5.21□□□□□ -1.57
CCNL1-204ENST00000464316 NESP48681 1621 aa5.21□□□□□ -1.58
CCNL1-204ENST00000464316 CUX1P39880 1505 aa5.2□□□□□ -1.58
CCNL1-204ENST00000464316 URB2Q14146 1524 aaKnown RBP5.2□□□□□ -1.58
CCNL1-204ENST00000464316 SYNJ1O43426 1573 aa5.2□□□□□ -1.58
CCNL1-204ENST00000464316 HIRIP3Q9BW71 556 aaPredicted RBP5.2□□□□□ -1.58
CCNL1-204ENST00000464316 MRS2Q9HD23 443 aa5.2□□□□□ -1.58
CCNL1-204ENST00000464316 EIF4G3O43432 1585 aaKnown RBP5.2□□□□□ -1.58
CCNL1-204ENST00000464316 FAM9BQ8IZU0 186 aa5.2□□□□□ -1.58
CCNL1-204ENST00000464316 RSPH6AQ9H0K4 717 aa5.19□□□□□ -1.58
CCNL1-204ENST00000464316 RTN4Q9NQC3 1192 aaKnown RBP5.19□□□□□ -1.58
CCNL1-204ENST00000464316 CHD1O14646 1710 aa5.19□□□□□ -1.58
CCNL1-204ENST00000464316 TCERG1O14776 1098 aaKnown RBP5.19□□□□□ -1.58
CCNL1-204ENST00000464316 EIF4G2P78344 907 aaKnown RBP eCLIP5.19□□□□□ -1.58
CCNL1-204ENST00000464316 ZBED9Q6R2W3 1325 aa5.19□□□□□ -1.58
CCNL1-204ENST00000464316 ABCA10Q8WWZ4 1543 aa5.18□□□□□ -1.58
CCNL1-204ENST00000464316 RAPGEF2Q9Y4G8 1499 aa5.18□□□□□ -1.58
CCNL1-204ENST00000464316 PAK3O75914 559 aaPredicted RBP5.18□□□□□ -1.58
CCNL1-204ENST00000464316 NPM2Q86SE8 214 aaKnown RBP5.18□□□□□ -1.58
CCNL1-204ENST00000464316 PPRC1Q5VV67 1664 aaKnown RBP5.18□□□□□ -1.58
CCNL1-204ENST00000464316 ADCY10Q96PN6 1610 aa5.18□□□□□ -1.58
CCNL1-204ENST00000464316 C11orf95C9JLR9 678 aaPredicted RBP5.17□□□□□ -1.58
CCNL1-204ENST00000464316 ATP1B4Q9UN42 357 aaPredicted RBP5.17□□□□□ -1.58
CCNL1-204ENST00000464316 IL27Q8NEV9 243 aa5.17□□□□□ -1.58
CCNL1-204ENST00000464316 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.16□□□□□ -1.58
CCNL1-204ENST00000464316 GSE1Q14687 1217 aa5.16□□□□□ -1.58
CCNL1-204ENST00000464316 MS4A1P11836 297 aa5.16□□□□□ -1.58
CCNL1-204ENST00000464316 WASHC2AQ641Q2 1341 aa5.15□□□□□ -1.58
CCNL1-204ENST00000464316 KDM5BQ9UGL1 1544 aa5.15□□□□□ -1.58
CCNL1-204ENST00000464316 NUDCQ9Y266 331 aa5.15□□□□□ -1.59
CCNL1-204ENST00000464316 LAS1LQ9Y4W2 734 aaKnown RBP5.15□□□□□ -1.59
CCNL1-204ENST00000464316 FHAD1B1AJZ9 1412 aa5.14□□□□□ -1.59
CCNL1-204ENST00000464316 KIF27Q86VH2 1401 aa5.14□□□□□ -1.59
CCNL1-204ENST00000464316 PRKRIP1Q9H875 184 aaPredicted RBP5.13□□□□□ -1.59
CCNL1-204ENST00000464316 WASHC2CQ9Y4E1 1318 aa5.13□□□□□ -1.59
CCNL1-204ENST00000464316 MRC2Q9UBG0 1479 aa5.13□□□□□ -1.59
CCNL1-204ENST00000464316 HSPA5P11021 654 aaKnown RBP5.13□□□□□ -1.59
CCNL1-204ENST00000464316 MAPKBP1O60336 1514 aa5.12□□□□□ -1.59
CCNL1-204ENST00000464316 ARAP1Q96P48 1450 aa5.12□□□□□ -1.59
CCNL1-204ENST00000464316 PDE4AP27815 886 aa5.12□□□□□ -1.59
CCNL1-204ENST00000464316 FAM43AQ8N2R8 423 aa5.12□□□□□ -1.59
CCNL1-204ENST00000464316 TMC1Q8TDI8 760 aa5.12□□□□□ -1.59
CCNL1-204ENST00000464316 PHF23Q9BUL5 403 aaPredicted RBP5.12□□□□□ -1.59
CCNL1-204ENST00000464316 SMG6Q86US8 1419 aaKnown RBP5.11□□□□□ -1.59
CCNL1-204ENST00000464316 TOPBP1Q92547 1522 aa5.11□□□□□ -1.59
CCNL1-204ENST00000464316 L1TD1Q5T7N2 865 aaKnown RBP5.11□□□□□ -1.59
CCNL1-204ENST00000464316 PRXQ9BXM0 1461 aa5.11□□□□□ -1.59
CCNL1-204ENST00000464316 MAP3K1Q13233 1512 aa5.11□□□□□ -1.59
CCNL1-204ENST00000464316 KIF13AQ9H1H9 1805 aa5.11□□□□□ -1.59
CCNL1-204ENST00000464316 PKNOX2Q96KN3 472 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms