RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 KIF13AQ9H1H9 1805 aa36.85■■■■□ 3.49
CPSF7-209ENST00000463244 IGF1RP08069 1367 aa36.65■■■■□ 3.46
CPSF7-209ENST00000463244 KIAA0586Q9BVV6 1533 aa36.63■■■■□ 3.45
CPSF7-209ENST00000463244 ABCC10Q5T3U5 1492 aa36.62■■■■□ 3.45
CPSF7-209ENST00000463244 CUL7Q14999 1698 aa36.61■■■■□ 3.45
CPSF7-209ENST00000463244 KIF27Q86VH2 1401 aa36.61■■■■□ 3.45
CPSF7-209ENST00000463244 MAPKBP1O60336 1514 aa36.61■■■■□ 3.45
CPSF7-209ENST00000463244 ADCY10Q96PN6 1610 aa36.6■■■■□ 3.45
CPSF7-209ENST00000463244 NPM1P06748 294 aaKnown RBP eCLIP36.58■■■■□ 3.45
CPSF7-209ENST00000463244 FAM69CQ0P6D2 419 aa36.56■■■■□ 3.44
CPSF7-209ENST00000463244 DIP2BQ9P265 1576 aa36.53■■■■□ 3.44
CPSF7-209ENST00000463244 CARMIL1Q5VZK9 1371 aa36.39■■■■□ 3.42
CPSF7-209ENST00000463244 PTPRGP23470 1445 aa36.33■■■■□ 3.41
CPSF7-209ENST00000463244 TSPOAP1O95153 1857 aa36.28■■■■□ 3.4
CPSF7-209ENST00000463244 KDM6BO15054 1643 aa36.26■■■■□ 3.4
CPSF7-209ENST00000463244 CARMIL2Q6F5E8 1435 aa36.25■■■■□ 3.39
CPSF7-209ENST00000463244 TNIKQ9UKE5 1360 aa36.25■■■■□ 3.39
CPSF7-209ENST00000463244 IQGAP2Q13576 1575 aa36.24■■■■□ 3.39
CPSF7-209ENST00000463244 ABCC2Q92887 1545 aa36.21■■■■□ 3.39
CPSF7-209ENST00000463244 TTBK1Q5TCY1 1321 aaPredicted RBP36.19■■■■□ 3.38
CPSF7-209ENST00000463244 UHRF1BP1LA0JNW5 1464 aa36.11■■■■□ 3.37
CPSF7-209ENST00000463244 DISP1Q96F81 1524 aa36.1■■■■□ 3.37
CPSF7-209ENST00000463244 ASXL2Q76L83 1435 aa36.09■■■■□ 3.37
CPSF7-209ENST00000463244 PLB1Q6P1J6 1458 aa36.09■■■■□ 3.37
CPSF7-209ENST00000463244 UACAQ9BZF9 1416 aa36.06■■■■□ 3.36
CPSF7-209ENST00000463244 GLI2P10070 1586 aa36.06■■■■□ 3.36
CPSF7-209ENST00000463244 RAPGEF2Q9Y4G8 1499 aa36.03■■■■□ 3.36
CPSF7-209ENST00000463244 KDM4FA0A1W2PPD8 638 aa36.02■■■■□ 3.36
CPSF7-209ENST00000463244 PPRC1Q5VV67 1664 aaKnown RBP36.02■■■■□ 3.36
CPSF7-209ENST00000463244 UGGT2Q9NYU1 1516 aa36.01■■■■□ 3.36
CPSF7-209ENST00000463244 KDM5BQ9UGL1 1544 aa35.96■■■■□ 3.35
CPSF7-209ENST00000463244 KIAA0556O60303 1618 aa35.92■■■■□ 3.34
CPSF7-209ENST00000463244 EPRSP07814 1512 aaKnown RBP35.89■■■■□ 3.34
CPSF7-209ENST00000463244 ZCCHC11Q5TAX3 1644 aaKnown RBP35.87■■■■□ 3.33
CPSF7-209ENST00000463244 MAP3K4Q9Y6R4 1608 aa35.86■■■■□ 3.33
CPSF7-209ENST00000463244 CTTNBP2Q8WZ74 1663 aa35.78■■■■□ 3.32
CPSF7-209ENST00000463244 COL17A1Q9UMD9 1497 aaPredicted RBP35.78■■■■□ 3.32
CPSF7-209ENST00000463244 TEX14Q8IWB6 1497 aa35.75■■■■□ 3.31
CPSF7-209ENST00000463244 WDR7Q9Y4E6 1490 aa35.71■■■■□ 3.31
CPSF7-209ENST00000463244 ADGRL1O94910 1474 aa35.67■■■■□ 3.3
CPSF7-209ENST00000463244 GOLGA3Q08378 1498 aa35.67■■■■□ 3.3
CPSF7-209ENST00000463244 ABCA8O94911 1581 aa35.62■■■■□ 3.29
CPSF7-209ENST00000463244 PRXQ9BXM0 1461 aa35.6■■■■□ 3.29
CPSF7-209ENST00000463244 CFAP43Q8NDM7 1665 aa35.54■■■■□ 3.28
CPSF7-209ENST00000463244 MAGI3Q5TCQ9 1506 aa35.52■■■■□ 3.28
CPSF7-209ENST00000463244 CD109Q6YHK3 1445 aa35.5■■■■□ 3.27
CPSF7-209ENST00000463244 KCNH8Q96L42 1107 aa35.47■■■■□ 3.27
CPSF7-209ENST00000463244 ATP10BO94823 1461 aa35.3■■■■□ 3.24
CPSF7-209ENST00000463244 HECW2Q9P2P5 1572 aa35.3■■■■□ 3.24
CPSF7-209ENST00000463244 FAM9AQ8IZU1 332 aaPredicted RBP35.29■■■■□ 3.24
CPSF7-209ENST00000463244 P3H3Q8IVL6 736 aa35.28■■■■□ 3.24
CPSF7-209ENST00000463244 ARID3CA6NKF2 412 aa35.26■■■■□ 3.24
CPSF7-209ENST00000463244 ARAP3Q8WWN8 1544 aa35.26■■■■□ 3.23
CPSF7-209ENST00000463244 SAMD9Q5K651 1589 aa35.25■■■■□ 3.23
CPSF7-209ENST00000463244 ILDR1Q86SU0 546 aaPredicted RBP35.22■■■■□ 3.23
CPSF7-209ENST00000463244 ABCA9Q8IUA7 1624 aa35.21■■■■□ 3.23
CPSF7-209ENST00000463244 KIF21BO75037 1637 aa35.21■■■■□ 3.23
CPSF7-209ENST00000463244 CSRNP3Q8WYN3 585 aa35.2■■■■□ 3.23
CPSF7-209ENST00000463244 RAPGEF6Q8TEU7 1601 aa35.17■■■■□ 3.22
CPSF7-209ENST00000463244 PHLDB1Q86UU1 1377 aa35.13■■■■□ 3.21
CPSF7-209ENST00000463244 NEO1Q92859 1461 aa35.05■■■■□ 3.2
CPSF7-209ENST00000463244 NUP153P49790 1475 aaKnown RBP35.04■■■■□ 3.2
CPSF7-209ENST00000463244 EEA1Q15075 1411 aa35.02■■■■□ 3.2
CPSF7-209ENST00000463244 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.01■■■■□ 3.2
CPSF7-209ENST00000463244 HNRNPUL2Q1KMD3 747 aaKnown RBP35.01■■■■□ 3.2
CPSF7-209ENST00000463244 RAPGEF3O95398 923 aa35■■■■□ 3.19
CPSF7-209ENST00000463244 FHOD3Q2V2M9 1422 aa34.98■■■■□ 3.19
CPSF7-209ENST00000463244 ADAMTSL3P82987 1691 aa34.96■■■■□ 3.19
CPSF7-209ENST00000463244 FRMPD1Q5SYB0 1578 aa34.96■■■■□ 3.19
CPSF7-209ENST00000463244 RANGAP1P46060 587 aaPredicted RBP34.93■■■■□ 3.18
CPSF7-209ENST00000463244 PTPRMP28827 1452 aa34.9■■■■□ 3.18
CPSF7-209ENST00000463244 BCORL1Q5H9F3 1711 aa34.85■■■■□ 3.17
CPSF7-209ENST00000463244 PLEKHD1A6NEE1 506 aa34.84■■■■□ 3.17
CPSF7-209ENST00000463244 EFCAB5A4FU69 1503 aa34.83■■■■□ 3.17
CPSF7-209ENST00000463244 RICTORQ6R327 1708 aa34.8■■■■□ 3.16
CPSF7-209ENST00000463244 ARHGEF40Q8TER5 1519 aa34.79■■■■□ 3.16
CPSF7-209ENST00000463244 DENND4BO75064 1496 aaPredicted RBP34.78■■■■□ 3.16
CPSF7-209ENST00000463244 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.78■■■■□ 3.16
CPSF7-209ENST00000463244 MADDQ8WXG6 1647 aa34.77■■■■□ 3.16
CPSF7-209ENST00000463244 AKNAQ7Z591 1439 aa34.77■■■■□ 3.16
CPSF7-209ENST00000463244 CFAP74Q9C0B2 1584 aa34.77■■■■□ 3.16
CPSF7-209ENST00000463244 FANCAO15360 1455 aa34.76■■■■□ 3.15
CPSF7-209ENST00000463244 ARID4BQ4LE39 1312 aaPredicted RBP34.76■■■■□ 3.15
CPSF7-209ENST00000463244 TTC37Q6PGP7 1564 aa34.74■■■■□ 3.15
CPSF7-209ENST00000463244 CDK13Q14004 1512 aaKnown RBP34.66■■■■□ 3.14
CPSF7-209ENST00000463244 ZMYM4Q5VZL5 1548 aa34.66■■■■□ 3.14
CPSF7-209ENST00000463244 PCF11O94913 1555 aaKnown RBP34.65■■■■□ 3.14
CPSF7-209ENST00000463244 RIMS1Q86UR5 1692 aaKnown RBP34.63■■■■□ 3.13
CPSF7-209ENST00000463244 LMTK3Q96Q04 1460 aa34.6■■■■□ 3.13
CPSF7-209ENST00000463244 ZFYVE16Q7Z3T8 1539 aa34.59■■■■□ 3.13
CPSF7-209ENST00000463244 YEATS2Q9ULM3 1422 aa34.57■■■■□ 3.13
CPSF7-209ENST00000463244 SIGLEC1Q9BZZ2 1709 aa34.57■■■■□ 3.12
CPSF7-209ENST00000463244 MAGI2Q86UL8 1455 aa34.57■■■■□ 3.12
CPSF7-209ENST00000463244 POGZQ7Z3K3 1410 aa34.55■■■■□ 3.12
CPSF7-209ENST00000463244 PLCH2O75038 1416 aa34.55■■■■□ 3.12
CPSF7-209ENST00000463244 FBXO41Q8TF61 875 aa34.54■■■■□ 3.12
CPSF7-209ENST00000463244 HECW1Q76N89 1606 aa34.54■■■■□ 3.12
CPSF7-209ENST00000463244 FMN1Q68DA7 1419 aa34.51■■■■□ 3.12
CPSF7-209ENST00000463244 SCAPERQ9BY12 1400 aa34.5■■■■□ 3.11
CPSF7-209ENST00000463244 UBTFP17480 764 aaKnown RBP34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms