RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 KIF27Q86VH2 1401 aa9.98□□□□□ -0.81
CCR9-205ENST00000463197 CARMIL1Q5VZK9 1371 aa9.97□□□□□ -0.81
CCR9-205ENST00000463197 KIAA0586Q9BVV6 1533 aa9.97□□□□□ -0.81
CCR9-205ENST00000463197 FAM69CQ0P6D2 419 aa9.95□□□□□ -0.82
CCR9-205ENST00000463197 TTBK1Q5TCY1 1321 aaPredicted RBP9.92□□□□□ -0.82
CCR9-205ENST00000463197 ADCY10Q96PN6 1610 aa9.92□□□□□ -0.82
CCR9-205ENST00000463197 ABCC10Q5T3U5 1492 aa9.91□□□□□ -0.82
CCR9-205ENST00000463197 PTPRGP23470 1445 aa9.9□□□□□ -0.83
CCR9-205ENST00000463197 KIF13AQ9H1H9 1805 aa9.89□□□□□ -0.83
CCR9-205ENST00000463197 NPM1P06748 294 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCR9-205ENST00000463197 MAPKBP1O60336 1514 aa9.87□□□□□ -0.83
CCR9-205ENST00000463197 DISP1Q96F81 1524 aa9.87□□□□□ -0.83
CCR9-205ENST00000463197 CUL7Q14999 1698 aa9.87□□□□□ -0.83
CCR9-205ENST00000463197 TNIKQ9UKE5 1360 aa9.87□□□□□ -0.83
CCR9-205ENST00000463197 AEBP2Q6ZN18 517 aaPredicted RBP9.86□□□□□ -0.83
CCR9-205ENST00000463197 DIP2BQ9P265 1576 aa9.85□□□□□ -0.83
CCR9-205ENST00000463197 KDM4FA0A1W2PPD8 638 aa9.84□□□□□ -0.83
CCR9-205ENST00000463197 RAPGEF2Q9Y4G8 1499 aa9.84□□□□□ -0.83
CCR9-205ENST00000463197 ABCC2Q92887 1545 aa9.82□□□□□ -0.84
CCR9-205ENST00000463197 CARMIL2Q6F5E8 1435 aa9.82□□□□□ -0.84
CCR9-205ENST00000463197 IQGAP2Q13576 1575 aa9.81□□□□□ -0.84
CCR9-205ENST00000463197 ASXL2Q76L83 1435 aa9.81□□□□□ -0.84
CCR9-205ENST00000463197 UACAQ9BZF9 1416 aa9.81□□□□□ -0.84
CCR9-205ENST00000463197 UHRF1BP1LA0JNW5 1464 aa9.8□□□□□ -0.84
CCR9-205ENST00000463197 COL17A1Q9UMD9 1497 aaPredicted RBP9.8□□□□□ -0.84
CCR9-205ENST00000463197 UGGT2Q9NYU1 1516 aa9.8□□□□□ -0.84
CCR9-205ENST00000463197 PRXQ9BXM0 1461 aa9.79□□□□□ -0.84
CCR9-205ENST00000463197 KDM5BQ9UGL1 1544 aa9.77□□□□□ -0.84
CCR9-205ENST00000463197 PLB1Q6P1J6 1458 aa9.77□□□□□ -0.85
CCR9-205ENST00000463197 EPRSP07814 1512 aaKnown RBP9.76□□□□□ -0.85
CCR9-205ENST00000463197 P3H3Q8IVL6 736 aa9.75□□□□□ -0.85
CCR9-205ENST00000463197 GLI2P10070 1586 aa9.75□□□□□ -0.85
CCR9-205ENST00000463197 KIAA0556O60303 1618 aa9.74□□□□□ -0.85
CCR9-205ENST00000463197 PPRC1Q5VV67 1664 aaKnown RBP9.74□□□□□ -0.85
CCR9-205ENST00000463197 KDM6BO15054 1643 aa9.73□□□□□ -0.85
CCR9-205ENST00000463197 TSPOAP1O95153 1857 aa9.72□□□□□ -0.85
CCR9-205ENST00000463197 CSRNP3Q8WYN3 585 aa9.72□□□□□ -0.85
CCR9-205ENST00000463197 ARID3CA6NKF2 412 aa9.71□□□□□ -0.86
CCR9-205ENST00000463197 KCNH8Q96L42 1107 aa9.71□□□□□ -0.86
CCR9-205ENST00000463197 ZCCHC11Q5TAX3 1644 aaKnown RBP9.71□□□□□ -0.86
CCR9-205ENST00000463197 ABCA8O94911 1581 aa9.7□□□□□ -0.86
CCR9-205ENST00000463197 CHIC1Q5VXU3 224 aa9.68□□□□□ -0.86
CCR9-205ENST00000463197 MAP3K4Q9Y6R4 1608 aa9.67□□□□□ -0.86
CCR9-205ENST00000463197 ATP10BO94823 1461 aa9.67□□□□□ -0.86
CCR9-205ENST00000463197 WDR7Q9Y4E6 1490 aa9.67□□□□□ -0.86
CCR9-205ENST00000463197 FAM9AQ8IZU1 332 aaPredicted RBP9.67□□□□□ -0.86
CCR9-205ENST00000463197 CD109Q6YHK3 1445 aa9.65□□□□□ -0.86
CCR9-205ENST00000463197 RANGAP1P46060 587 aaPredicted RBP9.65□□□□□ -0.86
CCR9-205ENST00000463197 GOLGA3Q08378 1498 aa9.65□□□□□ -0.87
CCR9-205ENST00000463197 CTTNBP2Q8WZ74 1663 aa9.64□□□□□ -0.87
CCR9-205ENST00000463197 MAGI3Q5TCQ9 1506 aa9.62□□□□□ -0.87
CCR9-205ENST00000463197 ADGRL1O94910 1474 aa9.62□□□□□ -0.87
CCR9-205ENST00000463197 TEX14Q8IWB6 1497 aa9.6□□□□□ -0.87
CCR9-205ENST00000463197 SAMD9Q5K651 1589 aa9.59□□□□□ -0.87
CCR9-205ENST00000463197 FHOD3Q2V2M9 1422 aa9.59□□□□□ -0.87
CCR9-205ENST00000463197 RAPGEF3O95398 923 aa9.59□□□□□ -0.87
CCR9-205ENST00000463197 EHMT2Q96KQ7 1210 aa9.59□□□□□ -0.87
CCR9-205ENST00000463197 NUP153P49790 1475 aaKnown RBP9.59□□□□□ -0.87
CCR9-205ENST00000463197 ARAP3Q8WWN8 1544 aa9.56□□□□□ -0.88
CCR9-205ENST00000463197 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.55□□□□□ -0.88
CCR9-205ENST00000463197 HNRNPUL2Q1KMD3 747 aaKnown RBP9.55□□□□□ -0.88
CCR9-205ENST00000463197 EEA1Q15075 1411 aa9.55□□□□□ -0.88
CCR9-205ENST00000463197 CFAP43Q8NDM7 1665 aa9.54□□□□□ -0.88
CCR9-205ENST00000463197 RAPGEF6Q8TEU7 1601 aa9.53□□□□□ -0.88
CCR9-205ENST00000463197 ABCA9Q8IUA7 1624 aa9.53□□□□□ -0.88
CCR9-205ENST00000463197 PLEKHD1A6NEE1 506 aa9.51□□□□□ -0.89
CCR9-205ENST00000463197 ILDR1Q86SU0 546 aaPredicted RBP9.51□□□□□ -0.89
CCR9-205ENST00000463197 UBTFP17480 764 aaKnown RBP9.49□□□□□ -0.89
CCR9-205ENST00000463197 FRMPD1Q5SYB0 1578 aa9.49□□□□□ -0.89
CCR9-205ENST00000463197 KIF21BO75037 1637 aa9.49□□□□□ -0.89
CCR9-205ENST00000463197 PHLDB1Q86UU1 1377 aa9.49□□□□□ -0.89
CCR9-205ENST00000463197 ARHGAP35Q9NRY4 1499 aa9.48□□□□□ -0.89
CCR9-205ENST00000463197 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCR9-205ENST00000463197 AKNAQ7Z591 1439 aa9.48□□□□□ -0.89
CCR9-205ENST00000463197 NEO1Q92859 1461 aa9.47□□□□□ -0.89
CCR9-205ENST00000463197 CDK13Q14004 1512 aaKnown RBP9.47□□□□□ -0.89
CCR9-205ENST00000463197 HECW2Q9P2P5 1572 aa9.47□□□□□ -0.89
CCR9-205ENST00000463197 ATP1B4Q9UN42 357 aaPredicted RBP9.45□□□□□ -0.9
CCR9-205ENST00000463197 YEATS2Q9ULM3 1422 aa9.45□□□□□ -0.9
CCR9-205ENST00000463197 PLCH2O75038 1416 aa9.44□□□□□ -0.9
CCR9-205ENST00000463197 FANCAO15360 1455 aa9.44□□□□□ -0.9
CCR9-205ENST00000463197 PTPRMP28827 1452 aa9.44□□□□□ -0.9
CCR9-205ENST00000463197 EFCAB5A4FU69 1503 aa9.44□□□□□ -0.9
CCR9-205ENST00000463197 TTC37Q6PGP7 1564 aa9.44□□□□□ -0.9
CCR9-205ENST00000463197 ADAMTSL3P82987 1691 aa9.43□□□□□ -0.9
CCR9-205ENST00000463197 DENND4BO75064 1496 aaPredicted RBP9.43□□□□□ -0.9
CCR9-205ENST00000463197 SIGLEC1Q9BZZ2 1709 aa9.42□□□□□ -0.9
CCR9-205ENST00000463197 ARID4BQ4LE39 1312 aaPredicted RBP9.41□□□□□ -0.9
CCR9-205ENST00000463197 AFAP1Q8N556 730 aa9.41□□□□□ -0.9
CCR9-205ENST00000463197 SCAPERQ9BY12 1400 aa9.4□□□□□ -0.9
CCR9-205ENST00000463197 RICTORQ6R327 1708 aa9.39□□□□□ -0.91
CCR9-205ENST00000463197 FMN1Q68DA7 1419 aa9.39□□□□□ -0.91
CCR9-205ENST00000463197 KIF14Q15058 1648 aa9.38□□□□□ -0.91
CCR9-205ENST00000463197 HSPA2P54652 639 aa9.38□□□□□ -0.91
CCR9-205ENST00000463197 MLECQ14165 292 aa9.38□□□□□ -0.91
CCR9-205ENST00000463197 EFCAB2Q5VUJ9 269 aa9.38□□□□□ -0.91
CCR9-205ENST00000463197 PLPPR3Q6T4P5 718 aa9.38□□□□□ -0.91
CCR9-205ENST00000463197 BCORL1Q5H9F3 1711 aa9.38□□□□□ -0.91
CCR9-205ENST00000463197 HECW1Q76N89 1606 aa9.38□□□□□ -0.91
CCR9-205ENST00000463197 MADDQ8WXG6 1647 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms